Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|1922
Gene name
Location	scaffold_174:34028..34540
Strand	-
Gene length (bp)	512
Transcript length (bp)	459
Coding sequence length (bp)	456
Protein length (aa)	152

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 25	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|1922 MLWRSAVAPLFLTVGLLLPSGSKALPTGGSEVSRRWYMPIPTGSGGSPPRGAAGQSSGSNTGTGTIGGLGNPATG GAGTGSHHAPAVGLSVGGNRPALAGGSVAPGPPPTRQHIGEEMHHIFPNRPIRRQPLGFAPSPFWRPWETPTRSG RL
Coding	>Ophio5\|1922 ATGCTCTGGCGTTCAGCTGTTGCTCCTTTGTTCCTGACCGTCGGCCTGCTCTTGCCGTCTGGTTCCAAGGCTCTG CCCACCGGGGGTAGCGAAGTCTCGCGGCGGTGGTATATGCCGATCCCCACCGGCTCCGGCGGCTCCCCTCCGCGC GGCGCCGCGGGGCAAAGCTCGGGCTCCAACACCGGCACCGGCACCATTGGTGGGCTGGGTAATCCGGCCACCGGT GGCGCAGGCACGGGCAGCCACCATGCTCCCGCCGTCGGTCTGTCCGTCGGCGGCAATAGGCCAGCGTTGGCGGGG GGAAGCGTCGCCCCAGGTCCCCCCCCAACACGACAGCATATAGGCGAAGAAATGCACCACATCTTTCCGAACCGA CCAATCCGACGACAGCCTCTGGGTTTTGCACCCTCGCCTTTCTGGCGGCCTTGGGAGACTCCAACGAGATCGGGC CGACTC
Transcript	>Ophio5\|1922 ATGCTCTGGCGTTCAGCTGTTGCTCCTTTGTTCCTGACCGTCGGCCTGCTCTTGCCGTCTGGTTCCAAGGCTCTG CCCACCGGGGGTAGCGAAGTCTCGCGGCGGTGGTATATGCCGATCCCCACCGGCTCCGGCGGCTCCCCTCCGCGC GGCGCCGCGGGGCAAAGCTCGGGCTCCAACACCGGCACCGGCACCATTGGTGGGCTGGGTAATCCGGCCACCGGT GGCGCAGGCACGGGCAGCCACCATGCTCCCGCCGTCGGTCTGTCCGTCGGCGGCAATAGGCCAGCGTTGGCGGGG GGAAGCGTCGCCCCAGGTCCCCCCCCAACACGACAGCATATAGGCGAAGAAATGCACCACATCTTTCCGAACCGA CCAATCCGACGACAGCCTCTGGGTTTTGCACCCTCGCCTTTCTGGCGGCCTTGGGAGACTCCAACGAGATCGGGC CGACTCTAA
Gene	>Ophio5\|1922 ATGCTCTGGCGTTCAGCTGTTGCTCCTTTGTTCCTGACCGTCGGCCTGCTCTTGCCGTCTGGTTCCAAGGCTCTG CCCACCGGGGTAAGTCGGGGCAAGCAAACAAATTTCAAGCGGGCTGCTAACATATAGCAAAGGGTAGCGAAGTCT CGCGGCGGTGGTATATGCCGATCCCCACCGGCTCCGGCGGCTCCCCTCCGCGCGGCGCCGCGGGGCAAAGCTCGG GCTCCAACACCGGCACCGGCACCATTGGTGGGCTGGGTAATCCGGCCACCGGTGGCGCAGGCACGGGCAGCCACC ATGCTCCCGCCGTCGGTCTGTCCGTCGGCGGCAATAGGCCAGCGTTGGCGGGGGGAAGCGTCGCCCCAGGTCCCC CCCCAACACGACAGCATATAGGCGAAGAAATGCACCACATCTTTCCGAACCGACCAATCCGACGACAGCCTCTGG GTTTTGCACCCTCGCCTTTCTGGCGGCCTTGGGAGACTCCAACGAGATCGGGCCGACTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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