Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1916
Gene name
Locationscaffold_174:18096..19340
Strand+
Gene length (bp)1244
Transcript length (bp)1023
Coding sequence length (bp)1020
Protein length (aa) 340

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 16 38 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1916
MAWTDSLWAVARDERVILLTMGLAAFGIVSTMMTSLTLIRDANEIAPTEPKTQYITQDTEDALQLETLEKLLKHP
SYSIREVATKILSDRAINDPETTTYLLYGITRPDYEERMQCLRALALLTGQTMGLDGLSRLNNEKAMSALVRSLE
LSLQDVEPPDLSNSHWDEYYLRDMAERFCLMFVLELVNKYGAGLLIKAKFVERWLAKQKWGSDAQERRHRFKEYM
NSKRNRLVDIVGSIKHLKRGLRALEKAGLIDKEHSRRHIRELPDLIMEEEVGEQPADPQARRAREHSAEERRLRR
QHREAMTMARRPKVVRAGVHQDMRQKAGPNQSWKGLFVPE
Coding >Ophio5|1916
ATGGCTTGGACCGACAGCCTCTGGGCCGTGGCCCGCGACGAACGCGTCATCCTGCTTACCATGGGTCTGGCCGCG
TTCGGCATTGTCAGCACCATGATGACGAGCCTCACCCTCATCCGCGACGCAAACGAGATTGCGCCGACGGAGCCC
AAGACGCAGTACATTACGCAAGACACCGAGGACGCGCTGCAGCTCGAGACGCTGGAGAAGCTCCTCAAACACCCC
AGCTATTCCATTCGAGAGGTGGCCACCAAGATCCTCAGCGACAGGGCCATCAACGACCCCGAGACGACAACGTAC
TTGTTGTACGGCATCACGCGGCCCGACTATGAAGAGCGCATGCAGTGCCTCCGGGCCCTGGCCCTTCTCACGGGA
CAAACCATGGGTCTGGATGGGCTGTCGAGGCTGAACAACGAGAAGGCCATGTCGGCCCTAGTGAGATCCCTGGAG
CTGAGCCTCCAGGATGTCGAGCCCCCAGACCTCAGCAACAGCCACTGGGATGAGTATTATCTTCGCGATATGGCT
GAGAGATTCTGCCTCATGTTCGTGCTCGAGCTCGTCAACAAGTACGGGGCAGGCCTCCTCATCAAGGCCAAGTTT
GTCGAACGATGGCTCGCCAAGCAGAAATGGGGCAGCGATGCACAGGAACGTCGCCACAGGTTCAAGGAGTACATG
AACTCCAAAAGGAACCGCCTGGTCGACATCGTGGGCAGCATCAAGCACTTGAAACGCGGTCTTCGGGCTCTGGAG
AAGGCGGGCCTCATCGACAAGGAACACTCTCGACGGCACATACGGGAGCTCCCAGACCTCATCATGGAGGAGGAG
GTGGGGGAGCAGCCCGCCGATCCGCAGGCCCGCCGTGCACGAGAGCACTCCGCCGAGGAACGAAGATTGCGACGT
CAACACCGAGAGGCCATGACCATGGCTCGCCGGCCTAAGGTGGTCCGAGCAGGGGTTCATCAAGATATGCGGCAA
AAAGCAGGCCCTAATCAGAGCTGGAAAGGGCTGTTTGTACCCGAA
Transcript >Ophio5|1916
ATGGCTTGGACCGACAGCCTCTGGGCCGTGGCCCGCGACGAACGCGTCATCCTGCTTACCATGGGTCTGGCCGCG
TTCGGCATTGTCAGCACCATGATGACGAGCCTCACCCTCATCCGCGACGCAAACGAGATTGCGCCGACGGAGCCC
AAGACGCAGTACATTACGCAAGACACCGAGGACGCGCTGCAGCTCGAGACGCTGGAGAAGCTCCTCAAACACCCC
AGCTATTCCATTCGAGAGGTGGCCACCAAGATCCTCAGCGACAGGGCCATCAACGACCCCGAGACGACAACGTAC
TTGTTGTACGGCATCACGCGGCCCGACTATGAAGAGCGCATGCAGTGCCTCCGGGCCCTGGCCCTTCTCACGGGA
CAAACCATGGGTCTGGATGGGCTGTCGAGGCTGAACAACGAGAAGGCCATGTCGGCCCTAGTGAGATCCCTGGAG
CTGAGCCTCCAGGATGTCGAGCCCCCAGACCTCAGCAACAGCCACTGGGATGAGTATTATCTTCGCGATATGGCT
GAGAGATTCTGCCTCATGTTCGTGCTCGAGCTCGTCAACAAGTACGGGGCAGGCCTCCTCATCAAGGCCAAGTTT
GTCGAACGATGGCTCGCCAAGCAGAAATGGGGCAGCGATGCACAGGAACGTCGCCACAGGTTCAAGGAGTACATG
AACTCCAAAAGGAACCGCCTGGTCGACATCGTGGGCAGCATCAAGCACTTGAAACGCGGTCTTCGGGCTCTGGAG
AAGGCGGGCCTCATCGACAAGGAACACTCTCGACGGCACATACGGGAGCTCCCAGACCTCATCATGGAGGAGGAG
GTGGGGGAGCAGCCCGCCGATCCGCAGGCCCGCCGTGCACGAGAGCACTCCGCCGAGGAACGAAGATTGCGACGT
CAACACCGAGAGGCCATGACCATGGCTCGCCGGCCTAAGGTGGTCCGAGCAGGGGTTCATCAAGATATGCGGCAA
AAAGCAGGCCCTAATCAGAGCTGGAAAGGGCTGTTTGTACCCGAATAA
Gene >Ophio5|1916
ATGGCTTGGACCGACAGCCTCTGGGCCGTGGCCCGCGACGAACGCGTCATCCTGCTTACCATGGGTCTGGCCGCG
TTCGGCATTGTCAGCACCATGATGACGAGCCTCACCCTCATCCGCGACGCAAACGAGATTGCGCCGACGGAGCCC
AAGACGCAGTACATTACGCAAGACACCGAGGACGCGCTGCAGCTCGAGACGCTGGAGAAGCTCCTCAAACACCCC
AGCTATTCCATTCGAGAGGTGGCCACCAAGATCCTCAGCGACAGGGCCATCAACGACCCCGAGACGACAACGTAC
TTGTTGTACGGCATCACGCGGCCCGACTATGAAGAGCGCATGCAGTGCCTCCGGGCCCTGGCCCTTCTCACGGGA
CAAACCATGGGTAGCGATGCCCGCGCCCTGGCTGTGCTTGGCTTCCCGGCTGACGATAGCATGATGCTAGGTCTG
GATGGGCTGTCGAGGCTGAACAACGAGAAGGCCATGTCGGCCCTAGTGAGATCCCTGGAGCTGAGCCTCCAGGAT
GTCGAGCCCCCAGACCTCAGCAACAGCCACTGGGATGAGTATTATCTTCGCGATATGGCTGAGAGATTCTGCCTC
ATGTTCGTGCTCGAGCTCGTCAACAAGTACGGGGCAGGCCTCCTCATCAAGGCCAAGTTTGTCGAACGATGGCTC
GCCAAGCAGAAATGGGGCAGCGATGCACAGGAACGTCGCCACAGGTTCAAGGAGTACATGAACTCCAAAAGGAAC
CGCCTGGTCGACATCGTGGGCAGCATCAAGCACTTGAAACGCGGTCTTCGGGCTCTGGAGAAGGCGGGCCTCATC
GACAAGGAACACTCTCGACGGCACATACGGGAGCTCCCAGACCTCATCATGGAGGAGGAGGTGGGGGAGCAGCCC
GCCGATCCGCAGGCCCGCCGTGCACGAGAGCACTCCGCCGAGGAACGAAGATTGCGACGTCAACACCGAGAGGCC
ATGGTGCTCAACGACGGAACAAGGCCGCTCGGCCGACAAGACATAATCGAACGAGACCATGGCTCGCCGGCCTAA
GGTGGTCCGAGCAGGGGTTCATCAAGATGTCAGCTTTCACACAGCCCGCCATGACGGCAGGTGATGACCTCGACA
ATGTGCAGATGCGGCAAAAAGCAGGCCCTAATCAGAGGTAAATGCGTGGCCAGGCCCGTTACTCGAGCAGGAAGG
ACTGACAGTCCGGCAGCTGGAAAGGGCTGTTTGTACCCGAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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