Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1911
Gene name
Locationscaffold_174:977..1767
Strand-
Gene length (bp)790
Transcript length (bp)636
Coding sequence length (bp)633
Protein length (aa) 211

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0462 0.0612 0.9377 0.0459 0.0584 0.0127 0.0714 0.1421 0.0676 0.004

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.871452

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 0.0 0.0 0.0
CcL In ants, during behavior modification 0.0 0.0 0.0
CcD In ants, recently dead 0.0 0.0 0.0

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 1.0 no
SC16a CcD 1.0 no
CcL CcD 1.0 no

Orthologs

Orthofinder run ID4
Orthogroup81
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5285
Ophiocordyceps australis 1348a (Ghana) OphauG2|6783
Ophiocordyceps australis map64 (Brazil) OphauB2|3223
Ophiocordyceps australis map64 (Brazil) OphauB2|5049
Ophiocordyceps australis map64 (Brazil) OphauB2|5050
Ophiocordyceps australis map64 (Brazil) OphauB2|6225
Ophiocordyceps camponoti-floridani Ophcf2|03522
Ophiocordyceps camponoti-floridani Ophcf2|06147
Ophiocordyceps camponoti-rufipedis Ophun1|3121
Ophiocordyceps camponoti-rufipedis Ophun1|4618
Ophiocordyceps kimflemingae Ophio5|1911 (this protein)
Ophiocordyceps kimflemingae Ophio5|8477
Ophiocordyceps subramaniannii Hirsu2|184
Ophiocordyceps subramaniannii Hirsu2|7612
Ophiocordyceps subramaniannii Hirsu2|7613

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1911
MNKATILALSTLVGRVMGLVTAPIDGYDVFTPEWEVELSPGGRTVTLNGTIEEVYQQVVQLNPNYEQQSSTVTTS
SSQKQSSTPSKVAQNASVMLAVDWNLATSLCGGKWQATSVRRVREGIGYLRRVRGRPSSLAGPSRCGRVSCAYNS
AIWWCNDDLQPKALSSFAAIADGAQFLVKRCVEWMNPQPEAFGGQAFHPSGWNVIIRKDEC
Coding >Ophio5|1911
ATGAACAAGGCTACAATCTTGGCTCTGTCTACTCTTGTCGGCAGGGTCATGGGACTCGTTACAGCGCCCATAGAC
GGCTACGACGTCTTCACGCCCGAGTGGGAGGTGGAGCTCTCTCCTGGCGGTCGGACGGTGACGCTCAACGGCACG
ATTGAGGAAGTGTACCAGCAAGTCGTGCAGCTGAACCCCAACTACGAGCAGCAAAGCTCGACGGTGACGACGTCT
TCGAGCCAGAAGCAGTCCAGCACGCCGTCCAAGGTGGCGCAGAACGCGTCGGTAATGCTTGCCGTAGACTGGAAC
TTGGCCACTAGCCTCTGCGGCGGCAAATGGCAGGCCACGTCGGTGCGTCGTGTCCGCGAGGGCATCGGCTACCTG
AGACGGGTTCGGGGACGACCGAGCAGCCTGGCCGGACCGTCACGATGTGGCCGTGTGAGCTGTGCCTATAATTCC
GCCATCTGGTGGTGTAACGATGATCTACAACCCAAGGCTCTCAGTTCTTTTGCCGCCATTGCTGACGGAGCACAG
TTCCTTGTCAAGAGATGCGTCGAGTGGATGAACCCACAGCCGGAGGCTTTTGGAGGTCAGGCCTTTCATCCGAGC
GGGTGGAATGTCATTATTCGCAAGGACGAATGC
Transcript >Ophio5|1911
ATGAACAAGGCTACAATCTTGGCTCTGTCTACTCTTGTCGGCAGGGTCATGGGACTCGTTACAGCGCCCATAGAC
GGCTACGACGTCTTCACGCCCGAGTGGGAGGTGGAGCTCTCTCCTGGCGGTCGGACGGTGACGCTCAACGGCACG
ATTGAGGAAGTGTACCAGCAAGTCGTGCAGCTGAACCCCAACTACGAGCAGCAAAGCTCGACGGTGACGACGTCT
TCGAGCCAGAAGCAGTCCAGCACGCCGTCCAAGGTGGCGCAGAACGCGTCGGTAATGCTTGCCGTAGACTGGAAC
TTGGCCACTAGCCTCTGCGGCGGCAAATGGCAGGCCACGTCGGTGCGTCGTGTCCGCGAGGGCATCGGCTACCTG
AGACGGGTTCGGGGACGACCGAGCAGCCTGGCCGGACCGTCACGATGTGGCCGTGTGAGCTGTGCCTATAATTCC
GCCATCTGGTGGTGTAACGATGATCTACAACCCAAGGCTCTCAGTTCTTTTGCCGCCATTGCTGACGGAGCACAG
TTCCTTGTCAAGAGATGCGTCGAGTGGATGAACCCACAGCCGGAGGCTTTTGGAGGTCAGGCCTTTCATCCGAGC
GGGTGGAATGTCATTATTCGCAAGGACGAATGCTGA
Gene >Ophio5|1911
ATGAACAAGGCTACAATCTTGGCTCTGTCTACTCTTGTCGGCAGGGTAAGACACCGCCAGCAAAAAAATCGAAGT
CGAGACTGACTCCGACCCGCCCACCAGGTCATGGGACTCGTTACAGCGCCCATAGACGGCTACGACGTCTTCACG
CCCGAGTGGGAGGTGGAGCTCTCTCCTGGCGGTCGGACGGTGACGCTCAACGGCACGATTGAGGAAGTGTACCAG
CAAGTCGTGCAGCTGAACCCCAACTACGAGCAGCAAAGCTCGACGGTGACGACGTCTTCGAGCCAGAAGCAGTCC
AGCACGCCGTCCAAGGTGGCGCAGAACGCGTCGGTAATGCTTGCCGTAGACTGGAACTTGGCCACTAGCCTCTGC
GGCGGCAAATGGCAGGCCACGTCGGTGCGTCGTGTCCGCGAGGGCATCGGCTACCTGAGACGGGTTCGGGGACGA
CCGAGCAGCCTGGCCGGACCGTCACGATGTGGCCGTGTGAGCTGTGCCTATAATTCCGCCATCTGGTGGTGTAAC
GATGTGCGTCTTCGTCGTCGTCGTCGTCGTCGTCGTCTTCGCTCGCCTCCTCTCCTCTCTTCCCATCCCCTCACG
TCTCATTCACTAACACACGAATCAGGATCTACAACCCAAGGCTCTCAGTTCTTTTGCCGCCATTGCTGACGGAGC
ACAGTTCCTTGTCAAGAGATGCGTCGAGTGGATGAACCCACAGCCGGAGGCTTTTGGAGGTCAGGCCTTTCATCC
GAGCGGGTGGAATGTCATTATTCGCAAGGACGAATGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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