Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1895
Gene name
Locationscaffold_172:29910..31562
Strand+
Gene length (bp)1652
Transcript length (bp)1599
Coding sequence length (bp)1596
Protein length (aa) 532

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07808 RED_N RED-like protein N-terminal region 7.1E-07 77 192

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1895
MNNDQFRKLVLANAGQSSGKKNAPEERRVGTGSLGSRERSSIPMTPRSVASSQSVFARQVAERNQAVHSQKKFKA
SAPKGVKLASGYVDRARERQDEPTDDRGKRLAALDKSFQEGQIEKAAYDKLRFEIAGGSLDSTHLVKGLDFKLLE
RIRRGEDIYGRKTNDTTGEPEKDESNDVEDALHEIEQSEVKAIERDRTVKKTGQLATAPVSGKKRTRDQILAELK
ASREAAKAQKESSLGSKFRKIGTKQKPGTRIERDGKGREVLIIVDEDGREKRKVRKLQPREGEDVPGNGLLMPDP
KAKPLGMEVPEKYRQRPEPEDDLDGDIFEGVGDDYDPLADLNVSDSDSSTNSNADAKERDAKSAHEAADEETKPE
SATMPPPPKPAAIGQGRNYFAGSKTGLLSEKTTEAPSASDPALMAAIKRAAALRRIEDDSDKDEGRAEAQTMEER
RRRLEQMKERDDDDLDMGFGTSRFEDEEDFDDRPVKLSAWDGSEGAAGRAGQTKRKRGPKKRKGDANSAADVMRV
MEQRKQS
Coding >Ophio5|1895
ATGAACAATGACCAGTTCCGCAAGCTGGTGCTCGCAAATGCGGGACAGTCCTCCGGCAAGAAGAATGCCCCGGAA
GAGCGCCGGGTTGGCACCGGGTCGCTGGGTTCGCGAGAACGAAGCAGCATTCCGATGACGCCACGCTCGGTCGCG
AGTTCTCAATCGGTTTTTGCTCGCCAGGTAGCCGAAAGGAATCAAGCGGTTCATTCTCAGAAAAAATTCAAGGCG
TCGGCGCCCAAAGGTGTGAAGCTAGCCTCGGGCTACGTCGACCGCGCGAGGGAAAGACAAGACGAGCCGACCGAC
GACAGAGGCAAGAGATTGGCAGCACTCGATAAGTCCTTTCAGGAGGGTCAAATTGAAAAAGCGGCTTACGATAAG
CTGAGGTTCGAGATAGCCGGCGGGTCTTTAGACAGCACTCATCTGGTCAAAGGTCTCGACTTTAAGCTGCTGGAG
AGAATACGTCGAGGCGAGGACATATACGGAAGGAAGACGAATGATACCACAGGGGAACCCGAGAAAGATGAAAGC
AACGACGTCGAAGATGCACTGCACGAAATCGAGCAAAGTGAAGTGAAAGCAATAGAGAGGGACAGAACGGTCAAA
AAGACGGGGCAGTTGGCTACGGCTCCCGTCTCAGGCAAGAAGCGGACTCGAGATCAGATCTTGGCGGAACTCAAA
GCATCGAGAGAGGCTGCCAAAGCCCAGAAGGAGTCGTCGCTGGGGAGCAAGTTTAGAAAGATCGGAACTAAGCAG
AAGCCCGGGACGCGAATCGAGCGCGACGGCAAGGGCAGGGAAGTCCTCATCATCGTCGATGAGGACGGGCGCGAG
AAGAGGAAAGTGCGCAAACTGCAGCCTCGAGAGGGAGAAGATGTCCCGGGCAACGGCCTCTTGATGCCGGATCCC
AAGGCCAAACCTCTGGGTATGGAGGTACCCGAAAAGTACAGACAGAGGCCAGAGCCCGAGGATGACCTGGATGGC
GACATATTTGAAGGAGTTGGAGACGATTACGATCCTCTCGCCGACTTGAACGTATCAGACTCTGACTCGAGCACT
AACTCGAACGCGGACGCAAAGGAACGCGATGCCAAATCGGCACACGAGGCGGCGGACGAGGAGACCAAGCCAGAG
TCCGCGACGATGCCTCCGCCGCCGAAGCCCGCCGCGATCGGACAAGGTCGCAACTACTTTGCAGGTTCAAAGACT
GGTTTGCTGTCAGAAAAAACAACAGAGGCCCCATCCGCATCCGATCCCGCCCTCATGGCAGCCATCAAACGGGCA
GCGGCTCTCCGCCGCATAGAAGACGACAGTGACAAGGACGAGGGTCGGGCAGAGGCACAGACTATGGAGGAGCGG
CGGCGCAGGCTGGAGCAGATGAAAGAGAGAGACGACGACGACCTCGACATGGGCTTCGGCACGAGCAGATTTGAG
GACGAGGAGGACTTTGACGACCGGCCCGTCAAGCTGTCCGCCTGGGACGGCAGCGAGGGCGCCGCTGGGCGAGCA
GGGCAGACGAAGCGGAAGAGGGGACCCAAGAAGCGCAAGGGAGATGCGAATAGCGCGGCTGATGTGATGCGCGTC
ATGGAGCAGCGGAAACAGTCG
Transcript >Ophio5|1895
ATGAACAATGACCAGTTCCGCAAGCTGGTGCTCGCAAATGCGGGACAGTCCTCCGGCAAGAAGAATGCCCCGGAA
GAGCGCCGGGTTGGCACCGGGTCGCTGGGTTCGCGAGAACGAAGCAGCATTCCGATGACGCCACGCTCGGTCGCG
AGTTCTCAATCGGTTTTTGCTCGCCAGGTAGCCGAAAGGAATCAAGCGGTTCATTCTCAGAAAAAATTCAAGGCG
TCGGCGCCCAAAGGTGTGAAGCTAGCCTCGGGCTACGTCGACCGCGCGAGGGAAAGACAAGACGAGCCGACCGAC
GACAGAGGCAAGAGATTGGCAGCACTCGATAAGTCCTTTCAGGAGGGTCAAATTGAAAAAGCGGCTTACGATAAG
CTGAGGTTCGAGATAGCCGGCGGGTCTTTAGACAGCACTCATCTGGTCAAAGGTCTCGACTTTAAGCTGCTGGAG
AGAATACGTCGAGGCGAGGACATATACGGAAGGAAGACGAATGATACCACAGGGGAACCCGAGAAAGATGAAAGC
AACGACGTCGAAGATGCACTGCACGAAATCGAGCAAAGTGAAGTGAAAGCAATAGAGAGGGACAGAACGGTCAAA
AAGACGGGGCAGTTGGCTACGGCTCCCGTCTCAGGCAAGAAGCGGACTCGAGATCAGATCTTGGCGGAACTCAAA
GCATCGAGAGAGGCTGCCAAAGCCCAGAAGGAGTCGTCGCTGGGGAGCAAGTTTAGAAAGATCGGAACTAAGCAG
AAGCCCGGGACGCGAATCGAGCGCGACGGCAAGGGCAGGGAAGTCCTCATCATCGTCGATGAGGACGGGCGCGAG
AAGAGGAAAGTGCGCAAACTGCAGCCTCGAGAGGGAGAAGATGTCCCGGGCAACGGCCTCTTGATGCCGGATCCC
AAGGCCAAACCTCTGGGTATGGAGGTACCCGAAAAGTACAGACAGAGGCCAGAGCCCGAGGATGACCTGGATGGC
GACATATTTGAAGGAGTTGGAGACGATTACGATCCTCTCGCCGACTTGAACGTATCAGACTCTGACTCGAGCACT
AACTCGAACGCGGACGCAAAGGAACGCGATGCCAAATCGGCACACGAGGCGGCGGACGAGGAGACCAAGCCAGAG
TCCGCGACGATGCCTCCGCCGCCGAAGCCCGCCGCGATCGGACAAGGTCGCAACTACTTTGCAGGTTCAAAGACT
GGTTTGCTGTCAGAAAAAACAACAGAGGCCCCATCCGCATCCGATCCCGCCCTCATGGCAGCCATCAAACGGGCA
GCGGCTCTCCGCCGCATAGAAGACGACAGTGACAAGGACGAGGGTCGGGCAGAGGCACAGACTATGGAGGAGCGG
CGGCGCAGGCTGGAGCAGATGAAAGAGAGAGACGACGACGACCTCGACATGGGCTTCGGCACGAGCAGATTTGAG
GACGAGGAGGACTTTGACGACCGGCCCGTCAAGCTGTCCGCCTGGGACGGCAGCGAGGGCGCCGCTGGGCGAGCA
GGGCAGACGAAGCGGAAGAGGGGACCCAAGAAGCGCAAGGGAGATGCGAATAGCGCGGCTGATGTGATGCGCGTC
ATGGAGCAGCGGAAACAGTCGTGA
Gene >Ophio5|1895
ATGAACAATGACCAGTTCCGCAAGCTGGTGCTCGCAAATGCGGGACAGTCCTCCGGCAAGAAGAATGCCCCGGAA
GAGCGCCGGGTTGGCACCGGGTCGCTGGGTTCGCGAGAACGAAGCAGCATTCCGATGACGCCGTGAGTCGACGCT
GTCCGAGTTTCAGGGCCTTCTGTTAACCCGCGTCACACAGACGCTCGGTCGCGAGTTCTCAATCGGTTTTTGCTC
GCCAGGTAGCCGAAAGGAATCAAGCGGTTCATTCTCAGAAAAAATTCAAGGCGTCGGCGCCCAAAGGTGTGAAGC
TAGCCTCGGGCTACGTCGACCGCGCGAGGGAAAGACAAGACGAGCCGACCGACGACAGAGGCAAGAGATTGGCAG
CACTCGATAAGTCCTTTCAGGAGGGTCAAATTGAAAAAGCGGCTTACGATAAGCTGAGGTTCGAGATAGCCGGCG
GGTCTTTAGACAGCACTCATCTGGTCAAAGGTCTCGACTTTAAGCTGCTGGAGAGAATACGTCGAGGCGAGGACA
TATACGGAAGGAAGACGAATGATACCACAGGGGAACCCGAGAAAGATGAAAGCAACGACGTCGAAGATGCACTGC
ACGAAATCGAGCAAAGTGAAGTGAAAGCAATAGAGAGGGACAGAACGGTCAAAAAGACGGGGCAGTTGGCTACGG
CTCCCGTCTCAGGCAAGAAGCGGACTCGAGATCAGATCTTGGCGGAACTCAAAGCATCGAGAGAGGCTGCCAAAG
CCCAGAAGGAGTCGTCGCTGGGGAGCAAGTTTAGAAAGATCGGAACTAAGCAGAAGCCCGGGACGCGAATCGAGC
GCGACGGCAAGGGCAGGGAAGTCCTCATCATCGTCGATGAGGACGGGCGCGAGAAGAGGAAAGTGCGCAAACTGC
AGCCTCGAGAGGGAGAAGATGTCCCGGGCAACGGCCTCTTGATGCCGGATCCCAAGGCCAAACCTCTGGGTATGG
AGGTACCCGAAAAGTACAGACAGAGGCCAGAGCCCGAGGATGACCTGGATGGCGACATATTTGAAGGAGTTGGAG
ACGATTACGATCCTCTCGCCGACTTGAACGTATCAGACTCTGACTCGAGCACTAACTCGAACGCGGACGCAAAGG
AACGCGATGCCAAATCGGCACACGAGGCGGCGGACGAGGAGACCAAGCCAGAGTCCGCGACGATGCCTCCGCCGC
CGAAGCCCGCCGCGATCGGACAAGGTCGCAACTACTTTGCAGGTTCAAAGACTGGTTTGCTGTCAGAAAAAACAA
CAGAGGCCCCATCCGCATCCGATCCCGCCCTCATGGCAGCCATCAAACGGGCAGCGGCTCTCCGCCGCATAGAAG
ACGACAGTGACAAGGACGAGGGTCGGGCAGAGGCACAGACTATGGAGGAGCGGCGGCGCAGGCTGGAGCAGATGA
AAGAGAGAGACGACGACGACCTCGACATGGGCTTCGGCACGAGCAGATTTGAGGACGAGGAGGACTTTGACGACC
GGCCCGTCAAGCTGTCCGCCTGGGACGGCAGCGAGGGCGCCGCTGGGCGAGCAGGGCAGACGAAGCGGAAGAGGG
GACCCAAGAAGCGCAAGGGAGATGCGAATAGCGCGGCTGATGTGATGCGCGTCATGGAGCAGCGGAAACAGTCGT
GA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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