Protein ID | Ophio5|1895 |
Gene name | |
Location | scaffold_172:29910..31562 |
Strand | + |
Gene length (bp) | 1652 |
Transcript length (bp) | 1599 |
Coding sequence length (bp) | 1596 |
Protein length (aa) | 532 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07808 | RED_N | RED-like protein N-terminal region | 7.1E-07 | 77 | 192 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|1895 MNNDQFRKLVLANAGQSSGKKNAPEERRVGTGSLGSRERSSIPMTPRSVASSQSVFARQVAERNQAVHSQKKFKA SAPKGVKLASGYVDRARERQDEPTDDRGKRLAALDKSFQEGQIEKAAYDKLRFEIAGGSLDSTHLVKGLDFKLLE RIRRGEDIYGRKTNDTTGEPEKDESNDVEDALHEIEQSEVKAIERDRTVKKTGQLATAPVSGKKRTRDQILAELK ASREAAKAQKESSLGSKFRKIGTKQKPGTRIERDGKGREVLIIVDEDGREKRKVRKLQPREGEDVPGNGLLMPDP KAKPLGMEVPEKYRQRPEPEDDLDGDIFEGVGDDYDPLADLNVSDSDSSTNSNADAKERDAKSAHEAADEETKPE SATMPPPPKPAAIGQGRNYFAGSKTGLLSEKTTEAPSASDPALMAAIKRAAALRRIEDDSDKDEGRAEAQTMEER RRRLEQMKERDDDDLDMGFGTSRFEDEEDFDDRPVKLSAWDGSEGAAGRAGQTKRKRGPKKRKGDANSAADVMRV MEQRKQS |
Coding | >Ophio5|1895 ATGAACAATGACCAGTTCCGCAAGCTGGTGCTCGCAAATGCGGGACAGTCCTCCGGCAAGAAGAATGCCCCGGAA GAGCGCCGGGTTGGCACCGGGTCGCTGGGTTCGCGAGAACGAAGCAGCATTCCGATGACGCCACGCTCGGTCGCG AGTTCTCAATCGGTTTTTGCTCGCCAGGTAGCCGAAAGGAATCAAGCGGTTCATTCTCAGAAAAAATTCAAGGCG TCGGCGCCCAAAGGTGTGAAGCTAGCCTCGGGCTACGTCGACCGCGCGAGGGAAAGACAAGACGAGCCGACCGAC GACAGAGGCAAGAGATTGGCAGCACTCGATAAGTCCTTTCAGGAGGGTCAAATTGAAAAAGCGGCTTACGATAAG CTGAGGTTCGAGATAGCCGGCGGGTCTTTAGACAGCACTCATCTGGTCAAAGGTCTCGACTTTAAGCTGCTGGAG AGAATACGTCGAGGCGAGGACATATACGGAAGGAAGACGAATGATACCACAGGGGAACCCGAGAAAGATGAAAGC AACGACGTCGAAGATGCACTGCACGAAATCGAGCAAAGTGAAGTGAAAGCAATAGAGAGGGACAGAACGGTCAAA AAGACGGGGCAGTTGGCTACGGCTCCCGTCTCAGGCAAGAAGCGGACTCGAGATCAGATCTTGGCGGAACTCAAA GCATCGAGAGAGGCTGCCAAAGCCCAGAAGGAGTCGTCGCTGGGGAGCAAGTTTAGAAAGATCGGAACTAAGCAG AAGCCCGGGACGCGAATCGAGCGCGACGGCAAGGGCAGGGAAGTCCTCATCATCGTCGATGAGGACGGGCGCGAG AAGAGGAAAGTGCGCAAACTGCAGCCTCGAGAGGGAGAAGATGTCCCGGGCAACGGCCTCTTGATGCCGGATCCC AAGGCCAAACCTCTGGGTATGGAGGTACCCGAAAAGTACAGACAGAGGCCAGAGCCCGAGGATGACCTGGATGGC GACATATTTGAAGGAGTTGGAGACGATTACGATCCTCTCGCCGACTTGAACGTATCAGACTCTGACTCGAGCACT AACTCGAACGCGGACGCAAAGGAACGCGATGCCAAATCGGCACACGAGGCGGCGGACGAGGAGACCAAGCCAGAG TCCGCGACGATGCCTCCGCCGCCGAAGCCCGCCGCGATCGGACAAGGTCGCAACTACTTTGCAGGTTCAAAGACT GGTTTGCTGTCAGAAAAAACAACAGAGGCCCCATCCGCATCCGATCCCGCCCTCATGGCAGCCATCAAACGGGCA GCGGCTCTCCGCCGCATAGAAGACGACAGTGACAAGGACGAGGGTCGGGCAGAGGCACAGACTATGGAGGAGCGG CGGCGCAGGCTGGAGCAGATGAAAGAGAGAGACGACGACGACCTCGACATGGGCTTCGGCACGAGCAGATTTGAG GACGAGGAGGACTTTGACGACCGGCCCGTCAAGCTGTCCGCCTGGGACGGCAGCGAGGGCGCCGCTGGGCGAGCA GGGCAGACGAAGCGGAAGAGGGGACCCAAGAAGCGCAAGGGAGATGCGAATAGCGCGGCTGATGTGATGCGCGTC ATGGAGCAGCGGAAACAGTCG |
Transcript | >Ophio5|1895 ATGAACAATGACCAGTTCCGCAAGCTGGTGCTCGCAAATGCGGGACAGTCCTCCGGCAAGAAGAATGCCCCGGAA GAGCGCCGGGTTGGCACCGGGTCGCTGGGTTCGCGAGAACGAAGCAGCATTCCGATGACGCCACGCTCGGTCGCG AGTTCTCAATCGGTTTTTGCTCGCCAGGTAGCCGAAAGGAATCAAGCGGTTCATTCTCAGAAAAAATTCAAGGCG TCGGCGCCCAAAGGTGTGAAGCTAGCCTCGGGCTACGTCGACCGCGCGAGGGAAAGACAAGACGAGCCGACCGAC GACAGAGGCAAGAGATTGGCAGCACTCGATAAGTCCTTTCAGGAGGGTCAAATTGAAAAAGCGGCTTACGATAAG CTGAGGTTCGAGATAGCCGGCGGGTCTTTAGACAGCACTCATCTGGTCAAAGGTCTCGACTTTAAGCTGCTGGAG AGAATACGTCGAGGCGAGGACATATACGGAAGGAAGACGAATGATACCACAGGGGAACCCGAGAAAGATGAAAGC AACGACGTCGAAGATGCACTGCACGAAATCGAGCAAAGTGAAGTGAAAGCAATAGAGAGGGACAGAACGGTCAAA AAGACGGGGCAGTTGGCTACGGCTCCCGTCTCAGGCAAGAAGCGGACTCGAGATCAGATCTTGGCGGAACTCAAA GCATCGAGAGAGGCTGCCAAAGCCCAGAAGGAGTCGTCGCTGGGGAGCAAGTTTAGAAAGATCGGAACTAAGCAG AAGCCCGGGACGCGAATCGAGCGCGACGGCAAGGGCAGGGAAGTCCTCATCATCGTCGATGAGGACGGGCGCGAG AAGAGGAAAGTGCGCAAACTGCAGCCTCGAGAGGGAGAAGATGTCCCGGGCAACGGCCTCTTGATGCCGGATCCC AAGGCCAAACCTCTGGGTATGGAGGTACCCGAAAAGTACAGACAGAGGCCAGAGCCCGAGGATGACCTGGATGGC GACATATTTGAAGGAGTTGGAGACGATTACGATCCTCTCGCCGACTTGAACGTATCAGACTCTGACTCGAGCACT AACTCGAACGCGGACGCAAAGGAACGCGATGCCAAATCGGCACACGAGGCGGCGGACGAGGAGACCAAGCCAGAG TCCGCGACGATGCCTCCGCCGCCGAAGCCCGCCGCGATCGGACAAGGTCGCAACTACTTTGCAGGTTCAAAGACT GGTTTGCTGTCAGAAAAAACAACAGAGGCCCCATCCGCATCCGATCCCGCCCTCATGGCAGCCATCAAACGGGCA GCGGCTCTCCGCCGCATAGAAGACGACAGTGACAAGGACGAGGGTCGGGCAGAGGCACAGACTATGGAGGAGCGG CGGCGCAGGCTGGAGCAGATGAAAGAGAGAGACGACGACGACCTCGACATGGGCTTCGGCACGAGCAGATTTGAG GACGAGGAGGACTTTGACGACCGGCCCGTCAAGCTGTCCGCCTGGGACGGCAGCGAGGGCGCCGCTGGGCGAGCA GGGCAGACGAAGCGGAAGAGGGGACCCAAGAAGCGCAAGGGAGATGCGAATAGCGCGGCTGATGTGATGCGCGTC ATGGAGCAGCGGAAACAGTCGTGA |
Gene | >Ophio5|1895 ATGAACAATGACCAGTTCCGCAAGCTGGTGCTCGCAAATGCGGGACAGTCCTCCGGCAAGAAGAATGCCCCGGAA GAGCGCCGGGTTGGCACCGGGTCGCTGGGTTCGCGAGAACGAAGCAGCATTCCGATGACGCCGTGAGTCGACGCT GTCCGAGTTTCAGGGCCTTCTGTTAACCCGCGTCACACAGACGCTCGGTCGCGAGTTCTCAATCGGTTTTTGCTC GCCAGGTAGCCGAAAGGAATCAAGCGGTTCATTCTCAGAAAAAATTCAAGGCGTCGGCGCCCAAAGGTGTGAAGC TAGCCTCGGGCTACGTCGACCGCGCGAGGGAAAGACAAGACGAGCCGACCGACGACAGAGGCAAGAGATTGGCAG CACTCGATAAGTCCTTTCAGGAGGGTCAAATTGAAAAAGCGGCTTACGATAAGCTGAGGTTCGAGATAGCCGGCG GGTCTTTAGACAGCACTCATCTGGTCAAAGGTCTCGACTTTAAGCTGCTGGAGAGAATACGTCGAGGCGAGGACA TATACGGAAGGAAGACGAATGATACCACAGGGGAACCCGAGAAAGATGAAAGCAACGACGTCGAAGATGCACTGC ACGAAATCGAGCAAAGTGAAGTGAAAGCAATAGAGAGGGACAGAACGGTCAAAAAGACGGGGCAGTTGGCTACGG CTCCCGTCTCAGGCAAGAAGCGGACTCGAGATCAGATCTTGGCGGAACTCAAAGCATCGAGAGAGGCTGCCAAAG CCCAGAAGGAGTCGTCGCTGGGGAGCAAGTTTAGAAAGATCGGAACTAAGCAGAAGCCCGGGACGCGAATCGAGC GCGACGGCAAGGGCAGGGAAGTCCTCATCATCGTCGATGAGGACGGGCGCGAGAAGAGGAAAGTGCGCAAACTGC AGCCTCGAGAGGGAGAAGATGTCCCGGGCAACGGCCTCTTGATGCCGGATCCCAAGGCCAAACCTCTGGGTATGG AGGTACCCGAAAAGTACAGACAGAGGCCAGAGCCCGAGGATGACCTGGATGGCGACATATTTGAAGGAGTTGGAG ACGATTACGATCCTCTCGCCGACTTGAACGTATCAGACTCTGACTCGAGCACTAACTCGAACGCGGACGCAAAGG AACGCGATGCCAAATCGGCACACGAGGCGGCGGACGAGGAGACCAAGCCAGAGTCCGCGACGATGCCTCCGCCGC CGAAGCCCGCCGCGATCGGACAAGGTCGCAACTACTTTGCAGGTTCAAAGACTGGTTTGCTGTCAGAAAAAACAA CAGAGGCCCCATCCGCATCCGATCCCGCCCTCATGGCAGCCATCAAACGGGCAGCGGCTCTCCGCCGCATAGAAG ACGACAGTGACAAGGACGAGGGTCGGGCAGAGGCACAGACTATGGAGGAGCGGCGGCGCAGGCTGGAGCAGATGA AAGAGAGAGACGACGACGACCTCGACATGGGCTTCGGCACGAGCAGATTTGAGGACGAGGAGGACTTTGACGACC GGCCCGTCAAGCTGTCCGCCTGGGACGGCAGCGAGGGCGCCGCTGGGCGAGCAGGGCAGACGAAGCGGAAGAGGG GACCCAAGAAGCGCAAGGGAGATGCGAATAGCGCGGCTGATGTGATGCGCGTCATGGAGCAGCGGAAACAGTCGT GA |