Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1885
Gene name
Locationscaffold_172:9074..10314
Strand-
Gene length (bp)1240
Transcript length (bp)1035
Coding sequence length (bp)1032
Protein length (aa) 344

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12505 DUF3712 Protein of unknown function (DUF3712) 7.0E-19 119 241

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 64 0.5

Transmembrane Domains

Domain # Start End Length
1 33 55 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1885
MSSDAKNMISQSENDARIKTSKSRACINHFKRFWWIHLLVAVILIVLIACLIVFVVLPKVVQSKLDAAKLDIQGV
AVLQTKANGYLMEINSTITTDGSVHADVEGFKGTLTLADVPDAKPFATLDFPPTTAESLSTVNISQPVQITDAAA
FIQFNTLFYQGKSIRVRLHGNTKVKPRGTAREVDVDFTKFLEFNGLERFQGTKVDGTVDIAARPGTPNFRGTAEI
PNNSHFTLEIGNATFTNFADDQDLGKLTINNLILYPGINKVDIEAELDQLKVLSIIRKRPYCETGIVPFKLLSTD
VVNHGEKLEYFVAALGSANQTVDMDIGRVLSKAVDGFKLSCSRG
Coding >Ophio5|1885
ATGTCTTCCGACGCAAAGAATATGATTTCACAGTCAGAAAACGACGCCCGGATAAAGACCAGCAAGAGCCGCGCT
TGCATCAACCACTTTAAGCGCTTCTGGTGGATTCACTTGCTCGTCGCCGTTATCCTCATCGTCCTCATCGCATGC
CTCATCGTCTTCGTCGTCCTGCCCAAAGTCGTCCAGAGCAAGTTGGACGCGGCCAAGCTGGATATCCAAGGCGTC
GCCGTGCTGCAGACCAAAGCCAATGGCTACTTGATGGAAATCAACTCGACCATCACCACCGATGGCTCCGTCCAC
GCCGACGTGGAAGGCTTCAAGGGGACCCTGACTCTGGCCGACGTCCCGGACGCCAAGCCCTTTGCCACCTTGGAC
TTCCCTCCCACCACGGCCGAATCGCTGTCCACGGTCAACATCAGCCAGCCGGTTCAGATCACTGATGCCGCAGCC
TTTATCCAGTTCAACACGCTCTTCTACCAGGGAAAGTCGATCCGCGTCCGACTGCACGGGAACACAAAGGTGAAG
CCTCGTGGCACTGCTAGGGAGGTTGACGTCGACTTTACCAAGTTTCTCGAGTTCAACGGCTTGGAACGCTTCCAA
GGCACAAAGGTCGACGGCACCGTCGATATCGCCGCACGCCCGGGCACCCCCAACTTCAGGGGCACGGCCGAGATC
CCCAACAACTCCCACTTCACCCTCGAGATAGGCAACGCCACGTTTACAAACTTCGCCGACGACCAGGATCTAGGC
AAACTGACCATCAATAACCTCATCCTCTACCCGGGCATCAACAAGGTCGATATCGAGGCCGAGCTCGATCAGCTC
AAGGTGCTCAGCATCATCCGCAAGAGGCCATACTGCGAGACGGGCATCGTCCCCTTTAAGCTGCTCAGCACCGAC
GTCGTCAACCATGGCGAGAAACTGGAATACTTCGTCGCCGCCCTCGGCAGCGCCAACCAGACCGTCGACATGGAC
ATTGGCCGCGTCCTGAGCAAGGCCGTCGACGGCTTCAAGCTGTCTTGCTCACGCGGC
Transcript >Ophio5|1885
ATGTCTTCCGACGCAAAGAATATGATTTCACAGTCAGAAAACGACGCCCGGATAAAGACCAGCAAGAGCCGCGCT
TGCATCAACCACTTTAAGCGCTTCTGGTGGATTCACTTGCTCGTCGCCGTTATCCTCATCGTCCTCATCGCATGC
CTCATCGTCTTCGTCGTCCTGCCCAAAGTCGTCCAGAGCAAGTTGGACGCGGCCAAGCTGGATATCCAAGGCGTC
GCCGTGCTGCAGACCAAAGCCAATGGCTACTTGATGGAAATCAACTCGACCATCACCACCGATGGCTCCGTCCAC
GCCGACGTGGAAGGCTTCAAGGGGACCCTGACTCTGGCCGACGTCCCGGACGCCAAGCCCTTTGCCACCTTGGAC
TTCCCTCCCACCACGGCCGAATCGCTGTCCACGGTCAACATCAGCCAGCCGGTTCAGATCACTGATGCCGCAGCC
TTTATCCAGTTCAACACGCTCTTCTACCAGGGAAAGTCGATCCGCGTCCGACTGCACGGGAACACAAAGGTGAAG
CCTCGTGGCACTGCTAGGGAGGTTGACGTCGACTTTACCAAGTTTCTCGAGTTCAACGGCTTGGAACGCTTCCAA
GGCACAAAGGTCGACGGCACCGTCGATATCGCCGCACGCCCGGGCACCCCCAACTTCAGGGGCACGGCCGAGATC
CCCAACAACTCCCACTTCACCCTCGAGATAGGCAACGCCACGTTTACAAACTTCGCCGACGACCAGGATCTAGGC
AAACTGACCATCAATAACCTCATCCTCTACCCGGGCATCAACAAGGTCGATATCGAGGCCGAGCTCGATCAGCTC
AAGGTGCTCAGCATCATCCGCAAGAGGCCATACTGCGAGACGGGCATCGTCCCCTTTAAGCTGCTCAGCACCGAC
GTCGTCAACCATGGCGAGAAACTGGAATACTTCGTCGCCGCCCTCGGCAGCGCCAACCAGACCGTCGACATGGAC
ATTGGCCGCGTCCTGAGCAAGGCCGTCGACGGCTTCAAGCTGTCTTGCTCACGCGGCTGA
Gene >Ophio5|1885
ATGTCTTCCGACGCAAAGAATATGATTTCACAGTCAGAAAACGACGCCCGGATAAAGACCAGCAAGAGCCGCGCT
TGCATCAACCACTTTAAGCGCTTCTGGTGGATTCACTTGCTCGTCGCCGTTATCCTCATCGTCCTCATCGCATGC
CTCATGTGAGTCGAATGGATTTCACTTTCTTCTACTGCATATCAATATAAACATATAATATACATATATGTATAT
ATATACAGTTGTTTGCCAAAAAAAAAAAAAATACTCATCTTCCTTTCCAAACAGCGTCTTCGTCGTCCTGCCCAA
AGTCGTCCAGAGCAAGTTGGACGCGGCCAAGCTGGATATCCAAGGCGTCGCCGTGCTGCAGACCAAAGCCAATGG
CTACTTGATGGAAATCAACTCGACCATCACCACCGATGGCTCCGTCCACGCCGACGTGGAAGGCTTCAAGGGGAC
CCTGACTCTGGCCGACGTCCCGGACGCCAAGCCCTTTGCCACCTTGGACTTCCCTCCCACCACGGCCGAATCGCT
GTCCACGGTCAACATCAGCCAGCCGGTTCAGATCACTGATGCCGCAGCCTTTATCCAGTTCAACACGCTCTTCTA
CCAGGGAAAGTCGATCCGCGTCCGACTGCACGGGAACACAAAGGTGAAGCCTCGTGGCACTGCTAGGGAGGTTGA
CGTCGACTTTACCAAGTTTCTCGAGTTCAACGGCTTGGAACGCTTCCAAGGCACAAAGGTCGACGGCACCGTCGA
TATCGCCGCACGCCCGGGCACCCCCAACTTCAGGGGCACGGCCGAGATCCCCAACAACTCCCACTTCACCCTCGA
GATAGTGAGTTTTTGGTCCTGTACGCTCGCGGCGCCGTTCCCTCCATGCTGACGTTCCCCCCACCTCCCCCCTCC
CCCCTTTCAGGGCAACGCCACGTTTACAAACTTCGCCGACGACCAGGATCTAGGCAAACTGACCATCAATAACCT
CATCCTCTACCCGGGCATCAACAAGGTCGATATCGAGGCCGAGCTCGATCAGCTCAAGGTGCTCAGCATCATCCG
CAAGAGGCCATACTGCGAGACGGGCATCGTCCCCTTTAAGCTGCTCAGCACCGACGTCGTCAACCATGGCGAGAA
ACTGGAATACTTCGTCGCCGCCCTCGGCAGCGCCAACCAGACCGTCGACATGGACATTGGCCGCGTCCTGAGCAA
GGCCGTCGACGGCTTCAAGCTGTCTTGCTCACGCGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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