Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1857
Gene name
Locationscaffold_170:22509..23697
Strand+
Gene length (bp)1188
Transcript length (bp)1188
Coding sequence length (bp)1185
Protein length (aa) 395

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 38 60 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1857
MFNETLETAEMAFEMEETALIKTIWGFFLMSLNFTFHVLVELTLTLVVGSLISITFFYCLRERKYLKSLIDNYLK
SPMVKLLKRSLAWLEPPPPPLKPRRAAERPAGAGNRMPAHSMLHNRCTKLSRTCERVSDFASGLQKEREKYRREM
HNCYTMERSARLVAEEDLRDSERNLEKAKARIVDLESQNEKAQARLAEVEKQAEDQNTQTQARIAEFECITAQLK
ANWRDTRVSAAKQVEALEGACKGETEKLTTSEKKKDEIQRELRREQLALRIMQESCRAQQKAHSEEVAKLKSNLQ
YRQNKKGGEMEAIYEAIRTPEKLSRSLDDCKNRFSAIKWSPRHSHGVCGGAIARRRMLRETLKSRNGSRMQVVDD
FDIPDMMLIVDDYDSPMTDV
Coding >Ophio5|1857
ATGTTCAACGAGACATTGGAAACAGCCGAAATGGCTTTCGAGATGGAGGAGACGGCCCTCATCAAAACCATCTGG
GGATTTTTCCTCATGTCCCTCAACTTCACCTTCCACGTCCTCGTCGAACTCACCCTCACCCTTGTGGTCGGTTCG
CTTATTTCGATTACTTTTTTCTACTGCCTCAGGGAGCGCAAGTATCTCAAGTCACTCATCGACAACTATCTCAAG
TCTCCCATGGTCAAGCTTCTCAAGCGGTCACTCGCTTGGTTGGAACCGCCGCCGCCGCCACTCAAGCCAAGGCGC
GCTGCTGAACGGCCAGCTGGGGCCGGAAACCGGATGCCGGCCCATTCTATGTTACACAACCGATGCACTAAGCTC
TCCCGAACGTGCGAAAGAGTCTCAGACTTTGCTTCCGGACTCCAAAAAGAGAGAGAGAAATATAGAAGAGAAATG
CACAACTGCTACACGATGGAGCGCTCAGCCCGGCTAGTGGCTGAAGAGGACCTCAGGGACAGCGAGAGGAACCTT
GAAAAAGCAAAGGCCCGCATCGTCGATCTCGAGTCCCAAAATGAAAAGGCTCAGGCCCGCCTCGCCGAGGTGGAG
AAACAAGCGGAGGACCAAAACACACAAACCCAGGCACGAATCGCCGAGTTCGAGTGTATAACGGCACAACTAAAG
GCGAACTGGAGAGACACAAGGGTGTCGGCGGCCAAACAGGTCGAAGCCCTCGAAGGCGCGTGCAAAGGCGAGACG
GAGAAGCTCACCACGTCCGAAAAGAAAAAGGACGAGATTCAACGCGAGCTGAGAAGGGAACAGCTCGCGCTCAGG
ATAATGCAAGAGTCTTGCCGCGCCCAACAGAAGGCGCACTCAGAGGAGGTGGCCAAGCTCAAATCGAACTTGCAG
TATCGGCAGAATAAGAAAGGTGGCGAGATGGAGGCCATCTACGAAGCCATCCGAACTCCCGAGAAGCTCAGTCGC
TCGCTTGACGATTGCAAGAATAGATTCAGCGCCATCAAATGGTCGCCCCGTCATTCGCACGGGGTTTGTGGCGGC
GCGATTGCACGGCGTCGAATGCTCCGGGAAACTCTCAAGTCGCGAAACGGTTCGCGGATGCAAGTCGTCGACGAC
TTTGACATCCCAGATATGATGCTCATCGTTGACGACTATGATAGTCCCATGACTGATGTT
Transcript >Ophio5|1857
ATGTTCAACGAGACATTGGAAACAGCCGAAATGGCTTTCGAGATGGAGGAGACGGCCCTCATCAAAACCATCTGG
GGATTTTTCCTCATGTCCCTCAACTTCACCTTCCACGTCCTCGTCGAACTCACCCTCACCCTTGTGGTCGGTTCG
CTTATTTCGATTACTTTTTTCTACTGCCTCAGGGAGCGCAAGTATCTCAAGTCACTCATCGACAACTATCTCAAG
TCTCCCATGGTCAAGCTTCTCAAGCGGTCACTCGCTTGGTTGGAACCGCCGCCGCCGCCACTCAAGCCAAGGCGC
GCTGCTGAACGGCCAGCTGGGGCCGGAAACCGGATGCCGGCCCATTCTATGTTACACAACCGATGCACTAAGCTC
TCCCGAACGTGCGAAAGAGTCTCAGACTTTGCTTCCGGACTCCAAAAAGAGAGAGAGAAATATAGAAGAGAAATG
CACAACTGCTACACGATGGAGCGCTCAGCCCGGCTAGTGGCTGAAGAGGACCTCAGGGACAGCGAGAGGAACCTT
GAAAAAGCAAAGGCCCGCATCGTCGATCTCGAGTCCCAAAATGAAAAGGCTCAGGCCCGCCTCGCCGAGGTGGAG
AAACAAGCGGAGGACCAAAACACACAAACCCAGGCACGAATCGCCGAGTTCGAGTGTATAACGGCACAACTAAAG
GCGAACTGGAGAGACACAAGGGTGTCGGCGGCCAAACAGGTCGAAGCCCTCGAAGGCGCGTGCAAAGGCGAGACG
GAGAAGCTCACCACGTCCGAAAAGAAAAAGGACGAGATTCAACGCGAGCTGAGAAGGGAACAGCTCGCGCTCAGG
ATAATGCAAGAGTCTTGCCGCGCCCAACAGAAGGCGCACTCAGAGGAGGTGGCCAAGCTCAAATCGAACTTGCAG
TATCGGCAGAATAAGAAAGGTGGCGAGATGGAGGCCATCTACGAAGCCATCCGAACTCCCGAGAAGCTCAGTCGC
TCGCTTGACGATTGCAAGAATAGATTCAGCGCCATCAAATGGTCGCCCCGTCATTCGCACGGGGTTTGTGGCGGC
GCGATTGCACGGCGTCGAATGCTCCGGGAAACTCTCAAGTCGCGAAACGGTTCGCGGATGCAAGTCGTCGACGAC
TTTGACATCCCAGATATGATGCTCATCGTTGACGACTATGATAGTCCCATGACTGATGTTTGA
Gene >Ophio5|1857
ATGTTCAACGAGACATTGGAAACAGCCGAAATGGCTTTCGAGATGGAGGAGACGGCCCTCATCAAAACCATCTGG
GGATTTTTCCTCATGTCCCTCAACTTCACCTTCCACGTCCTCGTCGAACTCACCCTCACCCTTGTGGTCGGTTCG
CTTATTTCGATTACTTTTTTCTACTGCCTCAGGGAGCGCAAGTATCTCAAGTCACTCATCGACAACTATCTCAAG
TCTCCCATGGTCAAGCTTCTCAAGCGGTCACTCGCTTGGTTGGAACCGCCGCCGCCGCCACTCAAGCCAAGGCGC
GCTGCTGAACGGCCAGCTGGGGCCGGAAACCGGATGCCGGCCCATTCTATGTTACACAACCGATGCACTAAGCTC
TCCCGAACGTGCGAAAGAGTCTCAGACTTTGCTTCCGGACTCCAAAAAGAGAGAGAGAAATATAGAAGAGAAATG
CACAACTGCTACACGATGGAGCGCTCAGCCCGGCTAGTGGCTGAAGAGGACCTCAGGGACAGCGAGAGGAACCTT
GAAAAAGCAAAGGCCCGCATCGTCGATCTCGAGTCCCAAAATGAAAAGGCTCAGGCCCGCCTCGCCGAGGTGGAG
AAACAAGCGGAGGACCAAAACACACAAACCCAGGCACGAATCGCCGAGTTCGAGTGTATAACGGCACAACTAAAG
GCGAACTGGAGAGACACAAGGGTGTCGGCGGCCAAACAGGTCGAAGCCCTCGAAGGCGCGTGCAAAGGCGAGACG
GAGAAGCTCACCACGTCCGAAAAGAAAAAGGACGAGATTCAACGCGAGCTGAGAAGGGAACAGCTCGCGCTCAGG
ATAATGCAAGAGTCTTGCCGCGCCCAACAGAAGGCGCACTCAGAGGAGGTGGCCAAGCTCAAATCGAACTTGCAG
TATCGGCAGAATAAGAAAGGTGGCGAGATGGAGGCCATCTACGAAGCCATCCGAACTCCCGAGAAGCTCAGTCGC
TCGCTTGACGATTGCAAGAATAGATTCAGCGCCATCAAATGGTCGCCCCGTCATTCGCACGGGGTTTGTGGCGGC
GCGATTGCACGGCGTCGAATGCTCCGGGAAACTCTCAAGTCGCGAAACGGTTCGCGGATGCAAGTCGTCGACGAC
TTTGACATCCCAGATATGATGCTCATCGTTGACGACTATGATAGTCCCATGACTGATGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail