Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1842
Gene name
Locationscaffold_17:72227..73643
Strand+
Gene length (bp)1416
Transcript length (bp)1239
Coding sequence length (bp)1236
Protein length (aa) 412

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 77 99 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1842
MLRRLPIASRRASVAASGPRTAAVQSLISPTRNISFLPWKRKPQATSSPTPPLPVYFPRSTWLSPLSHWKAPLRR
AVIATLICFTCYTAFLILVVLPVLVFLDEQWESLSEAEKEEYTKLRNEDDNLMFFPVPFTGFLADQPRYKPSDPE
YKEFYKIMQSKALQREIKTDLIHIVSKLVARSPELCRALGRKDPVAGKQWLEFSFPARPPPKQYIQGFAIRSNGL
YWTQQHVDGWSDEALNSVLYPKVVASAFWTFCSSLLKQNTQYISDYFSANASSVTRQSASSSQPSERAPTNRQGS
DSDASKPPAIFTHLPSHIQILHDPSRAGDSALDSRVRAALKDALQNFQKTYRPVAKSVGRGCFLVDGIVEFEGKR
LAVTTQVQAWYNPSSKNWILISIKVRYWRYMQIKYTS
Coding >Ophio5|1842
ATGCTGCGTCGTCTGCCGATCGCCTCGCGGCGGGCATCGGTAGCGGCATCTGGACCGCGAACCGCCGCCGTCCAG
TCGCTCATTTCGCCGACAAGAAACATCTCATTCCTGCCCTGGAAGCGGAAACCGCAGGCTACATCGTCGCCTACA
CCGCCGCTGCCCGTCTACTTCCCAAGATCAACTTGGCTATCCCCTCTGAGCCACTGGAAAGCACCTCTCCGACGA
GCGGTGATCGCGACTCTTATCTGCTTCACATGCTATACTGCCTTCCTAATCCTCGTGGTCTTGCCCGTGCTCGTA
TTTTTGGACGAGCAATGGGAGTCTCTCTCCGAGGCAGAAAAGGAGGAGTACACAAAGTTACGAAACGAGGACGAT
AACCTCATGTTTTTCCCGGTGCCCTTTACGGGCTTCTTGGCGGATCAGCCTCGATACAAGCCCAGCGACCCCGAA
TACAAAGAATTCTACAAGATAATGCAGAGCAAGGCTTTGCAACGTGAAATCAAGACGGATTTAATCCACATTGTA
TCAAAGTTGGTTGCGAGGAGCCCAGAATTGTGCAGAGCTCTCGGCCGAAAAGATCCTGTCGCCGGAAAACAATGG
CTCGAATTCTCATTTCCTGCCCGTCCTCCTCCGAAGCAATATATTCAGGGATTTGCCATTCGCAGCAACGGCTTA
TATTGGACGCAACAGCACGTCGACGGTTGGAGCGACGAGGCACTGAACTCGGTTCTCTACCCAAAAGTTGTCGCG
TCGGCTTTCTGGACATTCTGTAGCTCCCTCTTGAAGCAAAACACGCAGTACATCTCCGACTACTTTAGCGCAAAT
GCCTCATCAGTGACGCGGCAGTCCGCTTCCTCCTCTCAACCCTCCGAGCGGGCTCCGACGAACAGGCAGGGTAGC
GATTCGGACGCCTCCAAGCCACCAGCCATTTTCACGCACCTACCTTCACACATTCAAATTTTGCACGACCCATCA
AGAGCTGGAGATTCCGCGCTCGATTCCAGAGTACGAGCCGCCCTCAAGGATGCCCTCCAGAATTTCCAGAAAACC
TATCGGCCGGTTGCGAAAAGTGTCGGAAGGGGCTGCTTTTTAGTCGATGGCATCGTCGAGTTCGAAGGGAAACGC
TTAGCCGTCACGACCCAGGTTCAGGCTTGGTATAATCCATCGAGCAAGAACTGGATCCTCATCAGCATCAAGGTT
AGGTATTGGAGATACATGCAGATCAAATATACCAGC
Transcript >Ophio5|1842
ATGCTGCGTCGTCTGCCGATCGCCTCGCGGCGGGCATCGGTAGCGGCATCTGGACCGCGAACCGCCGCCGTCCAG
TCGCTCATTTCGCCGACAAGAAACATCTCATTCCTGCCCTGGAAGCGGAAACCGCAGGCTACATCGTCGCCTACA
CCGCCGCTGCCCGTCTACTTCCCAAGATCAACTTGGCTATCCCCTCTGAGCCACTGGAAAGCACCTCTCCGACGA
GCGGTGATCGCGACTCTTATCTGCTTCACATGCTATACTGCCTTCCTAATCCTCGTGGTCTTGCCCGTGCTCGTA
TTTTTGGACGAGCAATGGGAGTCTCTCTCCGAGGCAGAAAAGGAGGAGTACACAAAGTTACGAAACGAGGACGAT
AACCTCATGTTTTTCCCGGTGCCCTTTACGGGCTTCTTGGCGGATCAGCCTCGATACAAGCCCAGCGACCCCGAA
TACAAAGAATTCTACAAGATAATGCAGAGCAAGGCTTTGCAACGTGAAATCAAGACGGATTTAATCCACATTGTA
TCAAAGTTGGTTGCGAGGAGCCCAGAATTGTGCAGAGCTCTCGGCCGAAAAGATCCTGTCGCCGGAAAACAATGG
CTCGAATTCTCATTTCCTGCCCGTCCTCCTCCGAAGCAATATATTCAGGGATTTGCCATTCGCAGCAACGGCTTA
TATTGGACGCAACAGCACGTCGACGGTTGGAGCGACGAGGCACTGAACTCGGTTCTCTACCCAAAAGTTGTCGCG
TCGGCTTTCTGGACATTCTGTAGCTCCCTCTTGAAGCAAAACACGCAGTACATCTCCGACTACTTTAGCGCAAAT
GCCTCATCAGTGACGCGGCAGTCCGCTTCCTCCTCTCAACCCTCCGAGCGGGCTCCGACGAACAGGCAGGGTAGC
GATTCGGACGCCTCCAAGCCACCAGCCATTTTCACGCACCTACCTTCACACATTCAAATTTTGCACGACCCATCA
AGAGCTGGAGATTCCGCGCTCGATTCCAGAGTACGAGCCGCCCTCAAGGATGCCCTCCAGAATTTCCAGAAAACC
TATCGGCCGGTTGCGAAAAGTGTCGGAAGGGGCTGCTTTTTAGTCGATGGCATCGTCGAGTTCGAAGGGAAACGC
TTAGCCGTCACGACCCAGGTTCAGGCTTGGTATAATCCATCGAGCAAGAACTGGATCCTCATCAGCATCAAGGTT
AGGTATTGGAGATACATGCAGATCAAATATACCAGCTGA
Gene >Ophio5|1842
ATGCTGCGTCGTCTGCCGATCGCCTCGCGGCGGGCATCGGTAGCGGCATCTGGACCGCGAACCGCCGCCGTCCAG
TCGCTCATTTCGCCGACAAGAAACATCTCATTCCTGCCCTGGAAGCGGAAACCGCAGGCTACATCGTCGCCTACA
CCGCCGCTGCCCGTCTACTTCCCAAGATCAACTTGGCTATCCCCTCTGAGCCACTGGAAAGCACCTCTCCGGTAT
GCCGCCCCGTGCACGGTTTGATGGAGGACGAGAATGGTTGCTAACATCGTCGAGACGAGCGGTGATCGCGACTCT
TATCTGCTTCACATGCTATACTGCCTTCCTAATCCTCGTGGTCTTGCCCGTGCTCGTATTTTTGGACGAGCAATG
GGAGTCTCTCTCCGAGGCAGAAAAGGAGGAGTACACAAAGTTACGAAACGAGGACGATAACCTCATGTTTTTCCC
GGTGCCCTTTACGGGCTTCTTGGCGGATCAGCCTCGATACAAGCCCAGCGACCCCGAATACAAAGAATTCTACAA
GATAATGCAGAGCAAGGCTTTGCAACGTGAAATCAAGAGTACGTTTGCGCACCCTCTTTCGGTGGGAGACGGGGC
CCGCGCTGATCGAGTCTCCGCAGCGGATTTAATCCACATTGTATCAAAGTTGGTTGCGAGGAGCCCAGAATTGTG
CAGAGCTCTCGGCCGAAAAGATCCTGTCGCCGGAAAACAATGGCTCGAATTCTCATTTCCTGCCCGTCCTCCTCC
GAAGCAATATATTCAGGGGTGAGCCACCAGCGTCGAATCTTTCTTCTGGTACGGGCTGAGGCTGATACATCACAC
AGATTTGCCATTCGCAGCAACGGCTTATATTGGACGCAACAGCACGTCGACGGTTGGAGCGACGAGGCACTGAAC
TCGGTTCTCTACCCAAAAGTTGTCGCGTCGGCTTTCTGGACATTCTGTAGCTCCCTCTTGAAGCAAAACACGCAG
TACATCTCCGACTACTTTAGCGCAAATGCCTCATCAGTGACGCGGCAGTCCGCTTCCTCCTCTCAACCCTCCGAG
CGGGCTCCGACGAACAGGCAGGGTAGCGATTCGGACGCCTCCAAGCCACCAGCCATTTTCACGCACCTACCTTCA
CACATTCAAATTTTGCACGACCCATCAAGAGCTGGAGATTCCGCGCTCGATTCCAGAGTACGAGCCGCCCTCAAG
GATGCCCTCCAGAATTTCCAGAAAACCTATCGGCCGGTTGCGAAAAGTGTCGGAAGGGGCTGCTTTTTAGTCGAT
GGCATCGTCGAGTTCGAAGGGAAACGCTTAGCCGTCACGACCCAGGTTCAGGCTTGGTATAATCCATCGAGCAAG
AACTGGATCCTCATCAGCATCAAGGTTAGGTATTGGAGATACATGCAGATCAAATATACCAGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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