Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1837
Gene name
Locationscaffold_17:63070..64515
Strand-
Gene length (bp)1445
Transcript length (bp)1332
Coding sequence length (bp)1329
Protein length (aa) 443

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02535 Zip ZIP Zinc transporter 1.8E-55 50 439

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 52 443 3.0E-49
sp|Q8W246|ZIP7_ARATH Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1 58 443 1.0E-37
sp|P32804|ZRT1_YEAST Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 SV=1 50 443 3.0E-37
sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 52 443 4.0E-30
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 282 443 1.0E-25
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Swissprot ID Swissprot Description Start End E-value
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 52 443 3.0E-49
sp|Q8W246|ZIP7_ARATH Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1 58 443 1.0E-37
sp|P32804|ZRT1_YEAST Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 SV=1 50 443 3.0E-37
sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 52 443 4.0E-30
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 282 443 1.0E-25
sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 279 443 1.0E-23
sp|O23039|ZIP5_ARATH Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1 275 443 8.0E-23
sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 277 443 1.0E-22
sp|Q6L8F9|ZIP6_ORYSJ Zinc transporter 6 OS=Oryza sativa subsp. japonica GN=ZIP6 PE=2 SV=1 54 443 2.0E-22
sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=1 SV=2 280 443 6.0E-22
sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 280 443 2.0E-20
sp|Q38856|IRT1_ARATH Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=2 280 437 3.0E-20
sp|O81850|IRT2_ARATH Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1 280 443 5.0E-20
sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 277 443 8.0E-20
sp|Q5Z653|ZIP10_ORYSJ Zinc transporter 10 OS=Oryza sativa subsp. japonica GN=ZIP10 PE=3 SV=2 283 412 2.0E-19
sp|O04089|ZIP4_ARATH Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1 279 443 3.0E-19
sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=3 283 443 3.0E-19
sp|Q7XLD4|ZIP3_ORYSJ Zinc transporter 3 OS=Oryza sativa subsp. japonica GN=ZIP3 PE=1 SV=2 248 443 7.0E-19
sp|Q8S3W4|ZIP8_ARATH Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1 279 409 7.0E-19
sp|Q6L8F7|ZIP7_ORYSJ Zinc transporter 7 OS=Oryza sativa subsp. japonica GN=ZIP7 PE=2 SV=1 275 443 4.0E-18
sp|O82643|ZIP9_ARATH Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1 283 412 2.0E-17
sp|O64738|ZIP6_ARATH Zinc transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ZIP6 PE=3 SV=1 281 443 5.0E-16
sp|Q9FIS2|ZIP12_ARATH Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=3 SV=1 283 443 7.0E-16
sp|O81123|ZIP1_ARATH Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1 275 443 1.0E-15
sp|Q6ZJ91|ZIP4_ORYSJ Zinc transporter 4 OS=Oryza sativa subsp. japonica GN=ZIP4 PE=2 SV=1 264 443 3.0E-15
sp|Q0DHE3|ZIP9_ORYSJ Zinc transporter 9 OS=Oryza sativa subsp. japonica GN=ZIP9 PE=3 SV=3 317 443 1.0E-12
sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 51 148 2.0E-11
sp|Q0DHE3|ZIP9_ORYSJ Zinc transporter 9 OS=Oryza sativa subsp. japonica GN=ZIP9 PE=3 SV=3 52 148 5.0E-11
sp|O81123|ZIP1_ARATH Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1 57 171 3.0E-10
sp|Q9FIS2|ZIP12_ARATH Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=3 SV=1 34 209 4.0E-10
sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=1 SV=2 54 169 8.0E-09
sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 68 213 3.0E-08
sp|O23039|ZIP5_ARATH Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1 31 170 3.0E-08
sp|Q7XLD4|ZIP3_ORYSJ Zinc transporter 3 OS=Oryza sativa subsp. japonica GN=ZIP3 PE=1 SV=2 55 156 4.0E-08
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 26 131 8.0E-08
sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 58 147 1.0E-07
sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 36 176 2.0E-07
sp|O04089|ZIP4_ARATH Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1 68 144 1.0E-06
sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=3 68 168 2.0E-06
sp|Q6L8F7|ZIP7_ORYSJ Zinc transporter 7 OS=Oryza sativa subsp. japonica GN=ZIP7 PE=2 SV=1 54 150 8.0E-06
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GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0030001 metal ion transport Yes
GO:0055085 transmembrane transport Yes
GO:0015075 ion transmembrane transporter activity No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0022857 transmembrane transporter activity No
GO:0110165 cellular anatomical entity No
GO:0009987 cellular process No
GO:0005575 cellular_component No
GO:0008324 cation transmembrane transporter activity No
GO:0006811 ion transport No
GO:0006812 cation transport No
GO:0015318 inorganic molecular entity transmembrane transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 50 72 22
2 85 107 22
3 127 149 22
4 289 311 22
5 316 338 22
6 345 367 22
7 382 404 22
8 425 442 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1837
MGGENDAAAQDAAWSSLSTELLLHELRRREEQGERPQCGGRRMGWYDTSAHVCALFLILTLSTLACGLPLISRRA
AAGKLQKTIIFYCQHVGTGVLLATAFVHLLPTAFESLTDPCLPHFFSQGYKPLPGLVAMVAAVSVVGVESYLTAR
RAGHSHSHAHDYFGESDSEDHLDNEARRPSRRRSTGRRPPEISLHDVEATEGLVAGVSPLPEATPTSVGSPRTPD
SSAHDEDSDLDLDANDLNTVGNRADHFSSIKPSGRDAPAPAIQEVPQCLGPTPEQQRRQLLQCLLLEAGILFHSV
FIGMAVSVATGPAFMVFLVAICFHQSFEGLALGSRIAAIQFSRNSLRPWLMVLAYGVTTPLGQAIGMAVHKMYDP
ASMGGLLVVGFMNAVSAGLLLYAGLVQLLAEDFLTEKSYKVLKGKKRLRAYLAVVGGAVLMALVGAFA
Coding >Ophio5|1837
ATGGGCGGCGAAAATGATGCGGCGGCGCAAGACGCCGCCTGGTCGTCCCTCTCTACCGAATTGCTGCTCCACGAA
CTCCGGCGCCGGGAGGAGCAGGGCGAAAGGCCTCAGTGCGGAGGACGGCGGATGGGATGGTACGACACATCGGCG
CACGTGTGTGCGCTGTTCCTGATACTGACGCTGAGCACGCTTGCTTGTGGACTTCCCTTGATCTCGCGACGCGCA
GCGGCTGGTAAGCTGCAAAAAACCATCATCTTCTACTGCCAGCATGTCGGCACCGGCGTCCTCCTGGCCACGGCC
TTCGTCCACCTCCTACCGACGGCTTTCGAGTCCCTTACGGACCCCTGCCTTCCCCATTTCTTCAGCCAAGGCTAC
AAACCTCTTCCAGGTCTCGTGGCCATGGTGGCCGCCGTTTCCGTCGTCGGCGTCGAATCGTATTTGACGGCCCGT
AGAGCCGGTCACTCCCATTCGCACGCACACGACTACTTCGGCGAGTCCGACAGCGAAGACCACCTTGACAACGAA
GCGCGCCGTCCTTCGAGGCGCAGGTCCACCGGCCGACGGCCGCCGGAAATCTCGCTGCACGATGTCGAGGCCACA
GAGGGTCTCGTCGCCGGTGTCTCACCCTTACCCGAGGCGACGCCCACTAGCGTCGGCTCGCCAAGAACTCCTGAT
TCTTCGGCTCACGATGAGGACTCAGACCTGGACCTAGACGCCAACGACCTCAACACCGTCGGTAATCGAGCCGAC
CATTTCTCCTCCATCAAGCCCAGCGGCCGAGACGCGCCCGCCCCGGCAATCCAGGAGGTGCCGCAGTGCCTTGGG
CCGACGCCGGAGCAGCAGAGGCGACAGCTGCTGCAATGCCTGCTGCTCGAGGCCGGCATCCTCTTCCACAGCGTC
TTCATCGGCATGGCCGTGTCCGTGGCCACGGGGCCGGCCTTTATGGTCTTCCTCGTCGCCATCTGCTTCCACCAG
TCGTTCGAGGGCCTGGCGCTCGGCAGCCGGATCGCGGCCATTCAGTTCTCGCGGAACTCGCTGCGGCCCTGGCTG
ATGGTGCTCGCGTACGGAGTGACGACGCCGCTGGGGCAGGCCATCGGCATGGCCGTGCACAAAATGTACGACCCG
GCTTCGATGGGCGGCCTGCTGGTCGTGGGCTTCATGAACGCCGTCTCGGCCGGCCTGCTGCTCTACGCCGGGCTC
GTCCAGCTACTGGCCGAGGACTTTTTGACGGAGAAGAGCTACAAGGTGCTCAAGGGGAAGAAGAGGCTCCGTGCC
TATCTTGCCGTCGTCGGCGGAGCGGTCCTCATGGCCTTGGTGGGGGCTTTTGCC
Transcript >Ophio5|1837
ATGGGCGGCGAAAATGATGCGGCGGCGCAAGACGCCGCCTGGTCGTCCCTCTCTACCGAATTGCTGCTCCACGAA
CTCCGGCGCCGGGAGGAGCAGGGCGAAAGGCCTCAGTGCGGAGGACGGCGGATGGGATGGTACGACACATCGGCG
CACGTGTGTGCGCTGTTCCTGATACTGACGCTGAGCACGCTTGCTTGTGGACTTCCCTTGATCTCGCGACGCGCA
GCGGCTGGTAAGCTGCAAAAAACCATCATCTTCTACTGCCAGCATGTCGGCACCGGCGTCCTCCTGGCCACGGCC
TTCGTCCACCTCCTACCGACGGCTTTCGAGTCCCTTACGGACCCCTGCCTTCCCCATTTCTTCAGCCAAGGCTAC
AAACCTCTTCCAGGTCTCGTGGCCATGGTGGCCGCCGTTTCCGTCGTCGGCGTCGAATCGTATTTGACGGCCCGT
AGAGCCGGTCACTCCCATTCGCACGCACACGACTACTTCGGCGAGTCCGACAGCGAAGACCACCTTGACAACGAA
GCGCGCCGTCCTTCGAGGCGCAGGTCCACCGGCCGACGGCCGCCGGAAATCTCGCTGCACGATGTCGAGGCCACA
GAGGGTCTCGTCGCCGGTGTCTCACCCTTACCCGAGGCGACGCCCACTAGCGTCGGCTCGCCAAGAACTCCTGAT
TCTTCGGCTCACGATGAGGACTCAGACCTGGACCTAGACGCCAACGACCTCAACACCGTCGGTAATCGAGCCGAC
CATTTCTCCTCCATCAAGCCCAGCGGCCGAGACGCGCCCGCCCCGGCAATCCAGGAGGTGCCGCAGTGCCTTGGG
CCGACGCCGGAGCAGCAGAGGCGACAGCTGCTGCAATGCCTGCTGCTCGAGGCCGGCATCCTCTTCCACAGCGTC
TTCATCGGCATGGCCGTGTCCGTGGCCACGGGGCCGGCCTTTATGGTCTTCCTCGTCGCCATCTGCTTCCACCAG
TCGTTCGAGGGCCTGGCGCTCGGCAGCCGGATCGCGGCCATTCAGTTCTCGCGGAACTCGCTGCGGCCCTGGCTG
ATGGTGCTCGCGTACGGAGTGACGACGCCGCTGGGGCAGGCCATCGGCATGGCCGTGCACAAAATGTACGACCCG
GCTTCGATGGGCGGCCTGCTGGTCGTGGGCTTCATGAACGCCGTCTCGGCCGGCCTGCTGCTCTACGCCGGGCTC
GTCCAGCTACTGGCCGAGGACTTTTTGACGGAGAAGAGCTACAAGGTGCTCAAGGGGAAGAAGAGGCTCCGTGCC
TATCTTGCCGTCGTCGGCGGAGCGGTCCTCATGGCCTTGGTGGGGGCTTTTGCCTGA
Gene >Ophio5|1837
ATGGGCGGCGAAAATGATGCGGCGGCGCAAGGTGACTGATGCCGCGCAAATCCCCCCTCCCCGACGACTGATGCT
GACCAGAGAGTCTCGACAAGACGCCGCCTGGTCGTCCCTCTCTACCGAATTGCTGCTCCACGAACTCCGGCGCCG
GGAGGAGCAGGGCGAAAGGCCTCAGTGCGGAGGACGGCGGATGGGATGGTACGACACATCGGCGCACGTGTGTGC
GCTGTTCCTGATACTGACGCTGAGCACGCTTGGTATGTGTTTCTCTTGCGGCGGAGGAAGACGAGTCTGACGGCA
AGACAGCTTGTGGACTTCCCTTGATCTCGCGACGCGCAGCGGCTGGTAAGCTGCAAAAAACCATCATCTTCTACT
GCCAGCATGTCGGCACCGGCGTCCTCCTGGCCACGGCCTTCGTCCACCTCCTACCGACGGCTTTCGAGTCCCTTA
CGGACCCCTGCCTTCCCCATTTCTTCAGCCAAGGCTACAAACCTCTTCCAGGTCTCGTGGCCATGGTGGCCGCCG
TTTCCGTCGTCGGCGTCGAATCGTATTTGACGGCCCGTAGAGCCGGTCACTCCCATTCGCACGCACACGACTACT
TCGGCGAGTCCGACAGCGAAGACCACCTTGACAACGAAGCGCGCCGTCCTTCGAGGCGCAGGTCCACCGGCCGAC
GGCCGCCGGAAATCTCGCTGCACGATGTCGAGGCCACAGAGGGTCTCGTCGCCGGTGTCTCACCCTTACCCGAGG
CGACGCCCACTAGCGTCGGCTCGCCAAGAACTCCTGATTCTTCGGCTCACGATGAGGACTCAGACCTGGACCTAG
ACGCCAACGACCTCAACACCGTCGGTAATCGAGCCGACCATTTCTCCTCCATCAAGCCCAGCGGCCGAGACGCGC
CCGCCCCGGCAATCCAGGAGGTGCCGCAGTGCCTTGGGCCGACGCCGGAGCAGCAGAGGCGACAGCTGCTGCAAT
GCCTGCTGCTCGAGGCCGGCATCCTCTTCCACAGCGTCTTCATCGGCATGGCCGTGTCCGTGGCCACGGGGCCGG
CCTTTATGGTCTTCCTCGTCGCCATCTGCTTCCACCAGTCGTTCGAGGGCCTGGCGCTCGGCAGCCGGATCGCGG
CCATTCAGTTCTCGCGGAACTCGCTGCGGCCCTGGCTGATGGTGCTCGCGTACGGAGTGACGACGCCGCTGGGGC
AGGCCATCGGCATGGCCGTGCACAAAATGTACGACCCGGCTTCGATGGGCGGCCTGCTGGTCGTGGGCTTCATGA
ACGCCGTCTCGGCCGGCCTGCTGCTCTACGCCGGGCTCGTCCAGCTACTGGCCGAGGACTTTTTGACGGAGAAGA
GCTACAAGGTGCTCAAGGGGAAGAAGAGGCTCCGTGCCTATCTTGCCGTCGTCGGCGGAGCGGTCCTCATGGCCT
TGGTGGGGGCTTTTGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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