Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1833
Gene name
Locationscaffold_17:50438..51449
Strand+
Gene length (bp)1011
Transcript length (bp)897
Coding sequence length (bp)894
Protein length (aa) 298

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01814 Hemerythrin Hemerythrin HHE cation binding domain 8.6E-09 68 190

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1833
MAWLSIIVTALVLCGGALLRQSPLLYETVPPPTDQPWADRPMRLVPTPQFQSAKDDLFTTAATHMALLHNSLIRG
YNSIHLQAPYVRDADKADFLAYTRTWLRFIQSHHEDEDEILFPELRSVLGDDSVWGDVPEEHETLVRGLDGFRRY
LDSLSNASALTSTALLAVLDELHQPLEHHLHHEVAVMADMATHANVPAANSLQGAVASAMLKAWGKNTVRKAGVA
DVVPLFLLNADRTAEKGMWQDWPPMPRPVRWAMVNLVGAVHGGRWRFASCDGQGRPRQLYALSSARDGAEREL
Coding >Ophio5|1833
ATGGCCTGGCTCTCCATCATCGTCACCGCACTCGTCCTCTGTGGCGGCGCACTCCTCCGCCAGTCGCCACTGCTA
TACGAAACGGTGCCTCCGCCGACGGACCAGCCGTGGGCCGACCGCCCGATGAGGCTCGTCCCAACGCCCCAGTTC
CAGTCTGCCAAGGACGATCTCTTCACCACGGCGGCCACGCACATGGCGCTGCTGCACAATTCGCTCATCCGTGGA
TACAACTCGATCCATCTTCAGGCGCCGTACGTGCGAGACGCCGACAAGGCCGACTTCCTGGCCTACACCAGAACC
TGGCTGCGCTTCATCCAATCTCATCATGAAGACGAGGATGAGATCCTCTTTCCCGAGCTGAGGTCCGTGCTCGGG
GATGACTCCGTCTGGGGAGACGTGCCCGAGGAGCATGAAACGTTGGTTCGCGGGCTTGATGGATTCCGTCGTTAC
CTAGATTCGCTGTCGAATGCCTCGGCTCTGACATCGACGGCTCTACTCGCCGTCCTCGACGAGTTGCACCAGCCC
CTTGAGCATCACCTTCATCACGAGGTTGCCGTCATGGCCGACATGGCGACACATGCCAACGTGCCAGCAGCCAAC
TCGCTTCAGGGCGCCGTGGCGTCGGCGATGCTCAAGGCTTGGGGCAAGAACACGGTGCGCAAGGCGGGCGTCGCC
GACGTCGTGCCACTTTTTCTGCTCAACGCCGACCGCACGGCGGAAAAGGGTATGTGGCAAGACTGGCCGCCCATG
CCACGGCCTGTGCGGTGGGCCATGGTGAACCTGGTGGGCGCCGTGCACGGCGGCCGATGGCGATTCGCGAGCTGC
GATGGCCAGGGCCGGCCGAGGCAGTTGTACGCCCTGTCATCGGCGAGGGACGGAGCCGAGCGGGAGCTG
Transcript >Ophio5|1833
ATGGCCTGGCTCTCCATCATCGTCACCGCACTCGTCCTCTGTGGCGGCGCACTCCTCCGCCAGTCGCCACTGCTA
TACGAAACGGTGCCTCCGCCGACGGACCAGCCGTGGGCCGACCGCCCGATGAGGCTCGTCCCAACGCCCCAGTTC
CAGTCTGCCAAGGACGATCTCTTCACCACGGCGGCCACGCACATGGCGCTGCTGCACAATTCGCTCATCCGTGGA
TACAACTCGATCCATCTTCAGGCGCCGTACGTGCGAGACGCCGACAAGGCCGACTTCCTGGCCTACACCAGAACC
TGGCTGCGCTTCATCCAATCTCATCATGAAGACGAGGATGAGATCCTCTTTCCCGAGCTGAGGTCCGTGCTCGGG
GATGACTCCGTCTGGGGAGACGTGCCCGAGGAGCATGAAACGTTGGTTCGCGGGCTTGATGGATTCCGTCGTTAC
CTAGATTCGCTGTCGAATGCCTCGGCTCTGACATCGACGGCTCTACTCGCCGTCCTCGACGAGTTGCACCAGCCC
CTTGAGCATCACCTTCATCACGAGGTTGCCGTCATGGCCGACATGGCGACACATGCCAACGTGCCAGCAGCCAAC
TCGCTTCAGGGCGCCGTGGCGTCGGCGATGCTCAAGGCTTGGGGCAAGAACACGGTGCGCAAGGCGGGCGTCGCC
GACGTCGTGCCACTTTTTCTGCTCAACGCCGACCGCACGGCGGAAAAGGGTATGTGGCAAGACTGGCCGCCCATG
CCACGGCCTGTGCGGTGGGCCATGGTGAACCTGGTGGGCGCCGTGCACGGCGGCCGATGGCGATTCGCGAGCTGC
GATGGCCAGGGCCGGCCGAGGCAGTTGTACGCCCTGTCATCGGCGAGGGACGGAGCCGAGCGGGAGCTGTAA
Gene >Ophio5|1833
ATGGCCTGGCTCTCCATCATCGTCACCGCACTCGTCCTCTGTGGCGGCGCACTCCTCCGCCAGTCGCCACTGCTA
TACGAAACGGTGCCTCCGCCGACGGACCAGCCGTGGGCCGACCGCCCGATGAGGCTCGTCCCAACGCCCCAGTTC
CAGTCTGCCAAGGTAAACAAGCGGCAGTCTCGGAACTGACAGACATCAAGTGCTAAACCCTGACGCTCAGGACGA
TCTCTTCACCACGGCGGCCACGCACATGGCGCTGCTGCACAATTCGCTCATCCGTGGATACAACTCGATCCATCT
TCAGGCGCCGTACGTGCGAGACGCCGACAAGGCCGACTTCCTGGCCTACACCAGAACCTGGCTGCGCTTCATCCA
ATCTCATCATGAAGACGAGGATGAGATCCTCTTTCCCGAGCTGAGGTCCGTGCTCGGGGATGACTCCGTCTGGGG
AGACGTGCCCGAGGAGCATGGTACGCTCTCTTGACCCGTCAACGCCGCCAATAGACTAACAACCTTGGACGATGA
GAAACGTTGGTTCGCGGGCTTGATGGATTCCGTCGTTACCTAGATTCGCTGTCGAATGCCTCGGCTCTGACATCG
ACGGCTCTACTCGCCGTCCTCGACGAGTTGCACCAGCCCCTTGAGCATCACCTTCATCACGAGGTTGCCGTCATG
GCCGACATGGCGACACATGCCAACGTGCCAGCAGCCAACTCGCTTCAGGGCGCCGTGGCGTCGGCGATGCTCAAG
GCTTGGGGCAAGAACACGGTGCGCAAGGCGGGCGTCGCCGACGTCGTGCCACTTTTTCTGCTCAACGCCGACCGC
ACGGCGGAAAAGGGTATGTGGCAAGACTGGCCGCCCATGCCACGGCCTGTGCGGTGGGCCATGGTGAACCTGGTG
GGCGCCGTGCACGGCGGCCGATGGCGATTCGCGAGCTGCGATGGCCAGGGCCGGCCGAGGCAGTTGTACGCCCTG
TCATCGGCGAGGGACGGAGCCGAGCGGGAGCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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