© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|1827 |
| Gene name | |
| Location | scaffold_17:37922..39597 |
| Strand | + |
| Gene length (bp) | 1675 |
| Transcript length (bp) | 1524 |
| Coding sequence length (bp) | 1521 |
| Protein length (aa) | 507 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01417 | ENTH | ENTH domain | 1.5E-44 | 32 | 155 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P78813|YCTB_SCHPO | ENTH domain-containing protein C794.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.11c PE=1 SV=2 | 6 | 454 | 7.0E-100 |
| sp|P47160|ENT3_YEAST | Epsin-3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ENT3 PE=1 SV=1 | 6 | 223 | 8.0E-77 |
| sp|Q14677|EPN4_HUMAN | Clathrin interactor 1 OS=Homo sapiens GN=CLINT1 PE=1 SV=1 | 13 | 189 | 1.0E-48 |
| sp|A7Z035|EPN4_BOVIN | Clathrin interactor 1 OS=Bos taurus GN=CLINT1 PE=2 SV=1 | 13 | 189 | 1.0E-48 |
| sp|Q99KN9|EPN4_MOUSE | Clathrin interactor 1 OS=Mus musculus GN=Clint1 PE=1 SV=2 | 27 | 189 | 4.0E-46 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P78813|YCTB_SCHPO | ENTH domain-containing protein C794.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.11c PE=1 SV=2 | 6 | 454 | 7.0E-100 |
| sp|P47160|ENT3_YEAST | Epsin-3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ENT3 PE=1 SV=1 | 6 | 223 | 8.0E-77 |
| sp|Q14677|EPN4_HUMAN | Clathrin interactor 1 OS=Homo sapiens GN=CLINT1 PE=1 SV=1 | 13 | 189 | 1.0E-48 |
| sp|A7Z035|EPN4_BOVIN | Clathrin interactor 1 OS=Bos taurus GN=CLINT1 PE=2 SV=1 | 13 | 189 | 1.0E-48 |
| sp|Q99KN9|EPN4_MOUSE | Clathrin interactor 1 OS=Mus musculus GN=Clint1 PE=1 SV=2 | 27 | 189 | 4.0E-46 |
| sp|O95208|EPN2_HUMAN | Epsin-2 OS=Homo sapiens GN=EPN2 PE=1 SV=3 | 23 | 213 | 1.0E-45 |
| sp|Q8CHU3|EPN2_MOUSE | Epsin-2 OS=Mus musculus GN=Epn2 PE=1 SV=1 | 23 | 202 | 1.0E-44 |
| sp|Q9Z1Z3|EPN2_RAT | Epsin-2 OS=Rattus norvegicus GN=Epn2 PE=1 SV=1 | 23 | 201 | 1.0E-43 |
| sp|Q9H201|EPN3_HUMAN | Epsin-3 OS=Homo sapiens GN=EPN3 PE=2 SV=1 | 23 | 198 | 3.0E-43 |
| sp|Q80VP1|EPN1_MOUSE | Epsin-1 OS=Mus musculus GN=Epn1 PE=1 SV=3 | 23 | 170 | 1.0E-42 |
| sp|Q91W69|EPN3_MOUSE | Epsin-3 OS=Mus musculus GN=Epn3 PE=1 SV=1 | 23 | 182 | 1.0E-42 |
| sp|Q4V882|EPN3_RAT | Epsin-3 OS=Rattus norvegicus GN=Epn3 PE=1 SV=1 | 23 | 182 | 1.0E-42 |
| sp|Q9Y6I3|EPN1_HUMAN | Epsin-1 OS=Homo sapiens GN=EPN1 PE=1 SV=2 | 23 | 170 | 2.0E-42 |
| sp|O88339|EPN1_RAT | Epsin-1 OS=Rattus norvegicus GN=Epn1 PE=1 SV=1 | 23 | 170 | 2.0E-42 |
| sp|Q54EH1|EPN_DICDI | Epsin OS=Dictyostelium discoideum GN=epnA PE=3 SV=1 | 18 | 173 | 7.0E-37 |
| sp|Q67YI9|EPN2_ARATH | Clathrin interactor EPSIN 2 OS=Arabidopsis thaliana GN=EPSIN2 PE=1 SV=1 | 14 | 200 | 2.0E-35 |
| sp|Q93YP4|EPN3_ARATH | Clathrin interactor EPSIN 3 OS=Arabidopsis thaliana GN=EPSIN3 PE=2 SV=1 | 14 | 200 | 3.0E-33 |
| sp|Q8VY07|EPN1_ARATH | Clathrin interactor EPSIN 1 OS=Arabidopsis thaliana GN=EPSIN1 PE=1 SV=1 | 1 | 179 | 7.0E-33 |
| sp|Q8IYW4|ENTD1_HUMAN | ENTH domain-containing protein 1 OS=Homo sapiens GN=ENTHD1 PE=2 SV=1 | 23 | 169 | 9.0E-33 |
| sp|O74423|ENT1_SCHPO | Epsin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ent1 PE=1 SV=1 | 25 | 157 | 2.0E-27 |
| sp|Q12518|ENT1_YEAST | Epsin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ENT1 PE=1 SV=1 | 19 | 160 | 9.0E-20 |
| sp|Q05785|ENT2_YEAST | Epsin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ENT2 PE=1 SV=1 | 19 | 160 | 2.0E-19 |
| sp|Q07872|ENT4_YEAST | Epsin-4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ENT4 PE=1 SV=1 | 36 | 129 | 2.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 58 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 97.83 | 52.64 | 143.01 |
| CcL | In ants, during behavior modification | 249.46 | 117.74 | 381.18 |
| CcD | In ants, recently dead | 137.74 | 71.50 | 203.98 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.000286 | yes |
| SC16a | CcD | 0.153016 | no |
| CcL | CcD | 0.014705 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1827 MDFNDLKNSVSNLTLYDLKAGFRKAQNAVMNYTEMEAKVREATNNEPWGASTTLMQEIANGTFNYSTLNEIMPMI YRRFTEKSAEEWRQIYKSLQLLEFLIKHGSERVIDDARGHITLLKMLRQFHFIDQNGKDQGVNVRNRAKELAEML GDVERIRAERKKARATKNKYTGVEGGMSYGGGFSSSSRYGGFGSESAGYGGGGGGGGNATYGGFSGGVYGDGGGF GGQASDFRDSAGRSDRFEEYDEFDDDERPPKPSKKTERTGVKKTTGETAKKKEPEVDLFSFDEPQKSAPTAAAAP ANEDDEFDDFQSASPSAALGQATTIPLTSTASSTAQFAAPQPLSAPQKANLGQMVSTSSISPAPSGGGMAGANYS AFASPPVQAQSTAFQPTGPNYFGTVQAQSTTAAGTSTMPGLSSPTGGSSMAMAKAKPVGGGSGQSSGGGDAFGAL WGKASAGMKKTSTPVAGPTMGQLAKEKSSAGIWGPPAAAPAAQPTTGGGSASGDLLG |
| Coding | >Ophio5|1827 ATGGATTTCAATGATCTCAAAAACAGCGTGTCGAACCTGACCTTGTACGATCTCAAGGCCGGCTTTCGCAAAGCA CAAAATGCTGTTATGAACTATACCGAGATGGAGGCCAAGGTTCGAGAGGCGACCAACAACGAGCCTTGGGGTGCG TCCACCACCCTGATGCAAGAGATTGCCAATGGCACCTTCAACTATTCAACACTCAACGAAATCATGCCCATGATA TACCGACGCTTCACCGAGAAATCAGCCGAAGAGTGGCGCCAGATCTACAAATCTCTGCAATTGCTCGAGTTTCTC ATCAAGCACGGCTCCGAGCGGGTCATTGATGACGCTCGAGGCCACATCACATTGTTAAAGATGCTGCGGCAATTT CATTTCATCGACCAGAACGGCAAGGACCAGGGCGTCAACGTGCGCAACAGGGCCAAGGAGCTGGCCGAGATGCTG GGCGACGTCGAGCGCATCCGGGCCGAACGGAAGAAGGCCCGCGCCACCAAGAACAAGTATACCGGCGTTGAGGGC GGCATGTCGTACGGAGGCGGCTTCTCCAGCAGCAGCCGCTACGGCGGATTCGGCAGCGAGAGCGCGGGCTACGGC GGCGGCGGCGGCGGCGGCGGCAATGCCACATATGGCGGCTTCTCCGGTGGTGTCTACGGCGACGGTGGCGGCTTC GGCGGTCAGGCGAGCGATTTCCGGGACTCGGCCGGCAGGTCGGACAGATTCGAAGAGTACGACGAGTTTGACGAC GACGAGAGGCCGCCGAAACCTTCGAAGAAGACGGAAAGGACGGGAGTCAAGAAGACGACGGGCGAGACGGCAAAG AAGAAGGAGCCCGAAGTTGATCTCTTCTCCTTTGACGAGCCCCAGAAGAGCGCGCCGACAGCGGCGGCGGCGCCG GCCAACGAGGACGACGAATTCGACGACTTCCAGTCAGCATCGCCGTCGGCTGCTCTTGGACAGGCCACGACCATA CCGCTGACGTCGACGGCATCTTCAACGGCGCAGTTTGCCGCGCCCCAGCCGCTGTCGGCACCGCAGAAGGCGAAT CTCGGGCAAATGGTCAGCACGTCGTCCATCTCGCCGGCTCCCAGCGGCGGAGGGATGGCCGGGGCCAACTACTCG GCCTTCGCCAGCCCGCCGGTGCAGGCGCAGTCGACGGCATTCCAGCCGACGGGTCCCAACTACTTTGGCACCGTC CAGGCTCAGTCGACGACGGCAGCGGGCACGTCGACCATGCCGGGTCTCTCGTCGCCGACGGGCGGGTCGTCGATG GCCATGGCCAAGGCGAAGCCTGTCGGCGGCGGCTCTGGTCAGTCCTCGGGCGGCGGCGATGCCTTCGGCGCGTTA TGGGGCAAGGCCAGCGCCGGCATGAAGAAGACGAGCACGCCGGTGGCCGGACCGACGATGGGCCAGCTGGCCAAG GAGAAGAGCAGCGCCGGCATCTGGGGTCCTCCGGCAGCGGCCCCCGCTGCACAGCCCACGACAGGCGGCGGCTCG GCCTCGGGGGATCTGCTCGGG |
| Transcript | >Ophio5|1827 ATGGATTTCAATGATCTCAAAAACAGCGTGTCGAACCTGACCTTGTACGATCTCAAGGCCGGCTTTCGCAAAGCA CAAAATGCTGTTATGAACTATACCGAGATGGAGGCCAAGGTTCGAGAGGCGACCAACAACGAGCCTTGGGGTGCG TCCACCACCCTGATGCAAGAGATTGCCAATGGCACCTTCAACTATTCAACACTCAACGAAATCATGCCCATGATA TACCGACGCTTCACCGAGAAATCAGCCGAAGAGTGGCGCCAGATCTACAAATCTCTGCAATTGCTCGAGTTTCTC ATCAAGCACGGCTCCGAGCGGGTCATTGATGACGCTCGAGGCCACATCACATTGTTAAAGATGCTGCGGCAATTT CATTTCATCGACCAGAACGGCAAGGACCAGGGCGTCAACGTGCGCAACAGGGCCAAGGAGCTGGCCGAGATGCTG GGCGACGTCGAGCGCATCCGGGCCGAACGGAAGAAGGCCCGCGCCACCAAGAACAAGTATACCGGCGTTGAGGGC GGCATGTCGTACGGAGGCGGCTTCTCCAGCAGCAGCCGCTACGGCGGATTCGGCAGCGAGAGCGCGGGCTACGGC GGCGGCGGCGGCGGCGGCGGCAATGCCACATATGGCGGCTTCTCCGGTGGTGTCTACGGCGACGGTGGCGGCTTC GGCGGTCAGGCGAGCGATTTCCGGGACTCGGCCGGCAGGTCGGACAGATTCGAAGAGTACGACGAGTTTGACGAC GACGAGAGGCCGCCGAAACCTTCGAAGAAGACGGAAAGGACGGGAGTCAAGAAGACGACGGGCGAGACGGCAAAG AAGAAGGAGCCCGAAGTTGATCTCTTCTCCTTTGACGAGCCCCAGAAGAGCGCGCCGACAGCGGCGGCGGCGCCG GCCAACGAGGACGACGAATTCGACGACTTCCAGTCAGCATCGCCGTCGGCTGCTCTTGGACAGGCCACGACCATA CCGCTGACGTCGACGGCATCTTCAACGGCGCAGTTTGCCGCGCCCCAGCCGCTGTCGGCACCGCAGAAGGCGAAT CTCGGGCAAATGGTCAGCACGTCGTCCATCTCGCCGGCTCCCAGCGGCGGAGGGATGGCCGGGGCCAACTACTCG GCCTTCGCCAGCCCGCCGGTGCAGGCGCAGTCGACGGCATTCCAGCCGACGGGTCCCAACTACTTTGGCACCGTC CAGGCTCAGTCGACGACGGCAGCGGGCACGTCGACCATGCCGGGTCTCTCGTCGCCGACGGGCGGGTCGTCGATG GCCATGGCCAAGGCGAAGCCTGTCGGCGGCGGCTCTGGTCAGTCCTCGGGCGGCGGCGATGCCTTCGGCGCGTTA TGGGGCAAGGCCAGCGCCGGCATGAAGAAGACGAGCACGCCGGTGGCCGGACCGACGATGGGCCAGCTGGCCAAG GAGAAGAGCAGCGCCGGCATCTGGGGTCCTCCGGCAGCGGCCCCCGCTGCACAGCCCACGACAGGCGGCGGCTCG GCCTCGGGGGATCTGCTCGGGTGA |
| Gene | >Ophio5|1827 ATGGATTTCAATGATCTCAAAAACAGCGTGTCGAACCTGACCTTGTACGATCTCAAGGCCGGCTTTCGCAAAGCA CAAAATGGTACGCTCTCCCAGACAGCCGTCGAATCCTCGCTGACGCCCATTGCCAGCTGTTATGAACTATACCGA GATGGAGGCCAAGGTATGCTCTTGCGAAAGCGCTCCTCCGCTGCCTGTCAATTAACTCTCCCAAAGGTTCGAGAG GCGACCAACAACGAGCCTTGGGGTGCGTCCACCACCCTGATGCAAGAGATTGCCAATGGCACCTTCAACTAGTAC GCTTGCCACCTAAGTTTCATTGTGGCTGCTGCTGACAAGACGCAGTTCAACACTCAACGAAATCATGCCCATGAT ATACCGACGCTTCACCGAGAAATCAGCCGAAGAGTGGCGCCAGATCTACAAATCTCTGCAATTGCTCGAGTTTCT CATCAAGCACGGCTCCGAGCGGGTCATTGATGACGCTCGAGGCCACATCACATTGTTAAAGATGCTGCGGCAATT TCATTTCATCGACCAGAACGGCAAGGACCAGGGCGTCAACGTGCGCAACAGGGCCAAGGAGCTGGCCGAGATGCT GGGCGACGTCGAGCGCATCCGGGCCGAACGGAAGAAGGCCCGCGCCACCAAGAACAAGTATACCGGCGTTGAGGG CGGCATGTCGTACGGAGGCGGCTTCTCCAGCAGCAGCCGCTACGGCGGATTCGGCAGCGAGAGCGCGGGCTACGG CGGCGGCGGCGGCGGCGGCGGCAATGCCACATATGGCGGCTTCTCCGGTGGTGTCTACGGCGACGGTGGCGGCTT CGGCGGTCAGGCGAGCGATTTCCGGGACTCGGCCGGCAGGTCGGACAGATTCGAAGAGTACGACGAGTTTGACGA CGACGAGAGGCCGCCGAAACCTTCGAAGAAGACGGAAAGGACGGGAGTCAAGAAGACGACGGGCGAGACGGCAAA GAAGAAGGAGCCCGAAGTTGATCTCTTCTCCTTTGACGAGCCCCAGAAGAGCGCGCCGACAGCGGCGGCGGCGCC GGCCAACGAGGACGACGAATTCGACGACTTCCAGTCAGCATCGCCGTCGGCTGCTCTTGGACAGGCCACGACCAT ACCGCTGACGTCGACGGCATCTTCAACGGCGCAGTTTGCCGCGCCCCAGCCGCTGTCGGCACCGCAGAAGGCGAA TCTCGGGCAAATGGTCAGCACGTCGTCCATCTCGCCGGCTCCCAGCGGCGGAGGGATGGCCGGGGCCAACTACTC GGCCTTCGCCAGCCCGCCGGTGCAGGCGCAGTCGACGGCATTCCAGCCGACGGGTCCCAACTACTTTGGCACCGT CCAGGCTCAGTCGACGACGGCAGCGGGCACGTCGACCATGCCGGGTCTCTCGTCGCCGACGGGCGGGTCGTCGAT GGCCATGGCCAAGGCGAAGCCTGTCGGCGGCGGCTCTGGTCAGTCCTCGGGCGGCGGCGATGCCTTCGGCGCGTT ATGGGGCAAGGCCAGCGCCGGCATGAAGAAGACGAGCACGCCGGTGGCCGGACCGACGATGGGCCAGCTGGCCAA GGAGAAGAGCAGCGCCGGCATCTGGGGTCCTCCGGCAGCGGCCCCCGCTGCACAGCCCACGACAGGCGGCGGCTC GGCCTCGGGGGATCTGCTCGGGTGA |