Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1819
Gene name
Locationscaffold_17:18994..19561
Strand+
Gene length (bp)567
Transcript length (bp)516
Coding sequence length (bp)513
Protein length (aa) 171

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 3.3E-11 48 169

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 24 169 2.0E-28
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 29 169 5.0E-27
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 10 171 1.0E-23
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 22 171 9.0E-22
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 1 171 1.0E-20
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Swissprot ID Swissprot Description Start End E-value
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 24 169 2.0E-28
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 29 169 5.0E-27
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 10 171 1.0E-23
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 22 171 9.0E-22
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 1 171 1.0E-20
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 15 171 5.0E-20
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 28 169 2.0E-18
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 13 171 2.0E-17
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 1 171 2.0E-17
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 32 169 5.0E-17
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 30 171 2.0E-15
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 12 171 2.0E-14
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 26 171 2.0E-13
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 29 171 2.0E-10
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 19 171 4.0E-10
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 35 169 2.0E-09
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 28 171 3.0E-09
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 24 171 4.0E-09
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 13 168 4.0E-09
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 10 170 3.0E-08
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 30 171 4.0E-08
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 31 171 9.0E-08
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 30 169 1.0E-06
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 29 167 4.0E-06
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 40 58 18
2 78 100 22
3 113 135 22
4 140 162 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1819
MTKDNKPVHSVLQHDEIVEPATPMDAGNEKRLVRKQDARILPLSAAIYFLCFLDRANMGNARILNSTTHDDMPST
TGMSYSQFDIALMVFFFSYALFEVPSNMLLKKLRPSRWLAFLMFGWGAMTISLGGARTFTSVSALRFLLGVFEAG
LFPGLVFYLTFWYRHDERSVR
Coding >Ophio5|1819
ATGACCAAGGACAACAAGCCGGTCCATTCAGTCCTTCAACATGACGAGATCGTCGAGCCGGCGACTCCAATGGAC
GCTGGAAATGAAAAAAGGCTGGTCCGCAAGCAGGACGCGCGCATTTTGCCACTGTCAGCCGCCATCTACTTTCTT
TGCTTCCTGGACCGAGCCAACATGGGTAATGCGAGGATCCTCAACTCTACGACGCACGACGACATGCCCAGCACC
ACGGGCATGAGCTATAGTCAATTCGACATCGCCCTCATGGTCTTTTTCTTCTCGTATGCACTCTTCGAGGTTCCT
AGTAACATGCTGCTCAAGAAGCTCCGTCCGAGCCGCTGGTTAGCATTTCTCATGTTCGGCTGGGGCGCCATGACT
ATCTCGCTGGGCGGCGCTCGCACCTTTACTTCGGTGTCCGCCTTACGCTTCCTGCTGGGCGTGTTTGAGGCTGGT
CTTTTTCCCGGTCTGGTGTTTTATCTGACGTTCTGGTACAGGCATGATGAGCGCAGTGTCCGG
Transcript >Ophio5|1819
ATGACCAAGGACAACAAGCCGGTCCATTCAGTCCTTCAACATGACGAGATCGTCGAGCCGGCGACTCCAATGGAC
GCTGGAAATGAAAAAAGGCTGGTCCGCAAGCAGGACGCGCGCATTTTGCCACTGTCAGCCGCCATCTACTTTCTT
TGCTTCCTGGACCGAGCCAACATGGGTAATGCGAGGATCCTCAACTCTACGACGCACGACGACATGCCCAGCACC
ACGGGCATGAGCTATAGTCAATTCGACATCGCCCTCATGGTCTTTTTCTTCTCGTATGCACTCTTCGAGGTTCCT
AGTAACATGCTGCTCAAGAAGCTCCGTCCGAGCCGCTGGTTAGCATTTCTCATGTTCGGCTGGGGCGCCATGACT
ATCTCGCTGGGCGGCGCTCGCACCTTTACTTCGGTGTCCGCCTTACGCTTCCTGCTGGGCGTGTTTGAGGCTGGT
CTTTTTCCCGGTCTGGTGTTTTATCTGACGTTCTGGTACAGGCATGATGAGCGCAGTGTCCGGTGA
Gene >Ophio5|1819
ATGACCAAGGACAACAAGCCGGTCCATTCAGTCCTTCAACATGTGCGTAAGCCCTGGCATGCCTCGACACGTCGT
CTGACACGGCAAGTGCAGGACGAGATCGTCGAGCCGGCGACTCCAATGGACGCTGGAAATGAAAAAAGGCTGGTC
CGCAAGCAGGACGCGCGCATTTTGCCACTGTCAGCCGCCATCTACTTTCTTTGCTTCCTGGACCGAGCCAACATG
GGTAATGCGAGGATCCTCAACTCTACGACGCACGACGACATGCCCAGCACCACGGGCATGAGCTATAGTCAATTC
GACATCGCCCTCATGGTCTTTTTCTTCTCGTATGCACTCTTCGAGGTTCCTAGTAACATGCTGCTCAAGAAGCTC
CGTCCGAGCCGCTGGTTAGCATTTCTCATGTTCGGCTGGGGCGCCATGACTATCTCGCTGGGCGGCGCTCGCACC
TTTACTTCGGTGTCCGCCTTACGCTTCCTGCTGGGCGTGTTTGAGGCTGGTCTTTTTCCCGGTCTGGTGTTTTAT
CTGACGTTCTGGTACAGGCATGATGAGCGCAGTGTCCGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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