Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1816
Gene name
Locationscaffold_17:15670..17280
Strand-
Gene length (bp)1610
Transcript length (bp)1356
Coding sequence length (bp)1353
Protein length (aa) 451

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00190 Cupin_1 Cupin 6.2E-20 123 251
PF00190 Cupin_1 Cupin 5.3E-20 294 411
PF07883 Cupin_2 Cupin domain 2.9E-13 146 218
PF07883 Cupin_2 Cupin domain 7.3E-13 325 399

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O34714|OXDC_BACSU Oxalate decarboxylase OxdC OS=Bacillus subtilis (strain 168) GN=oxdC PE=1 SV=1 66 450 3.0E-149
sp|O34767|OXDD_BACSU Oxalate decarboxylase OxdD OS=Bacillus subtilis (strain 168) GN=oxdD PE=1 SV=1 70 451 3.0E-134
sp|D4AKL6|OXDD_ARTBC Probable oxalate decarboxylase ARB_04859 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04859 PE=1 SV=1 74 420 1.0E-90
sp|D4B179|OXDC_ARTBC Oxalate decarboxylase ARB_02208 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02208 PE=1 SV=1 74 420 5.0E-86
sp|D4B179|OXDC_ARTBC Oxalate decarboxylase ARB_02208 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02208 PE=1 SV=1 124 266 2.0E-10
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O34714|OXDC_BACSU Oxalate decarboxylase OxdC OS=Bacillus subtilis (strain 168) GN=oxdC PE=1 SV=1 66 450 3.0E-149
sp|O34767|OXDD_BACSU Oxalate decarboxylase OxdD OS=Bacillus subtilis (strain 168) GN=oxdD PE=1 SV=1 70 451 3.0E-134
sp|D4AKL6|OXDD_ARTBC Probable oxalate decarboxylase ARB_04859 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04859 PE=1 SV=1 74 420 1.0E-90
sp|D4B179|OXDC_ARTBC Oxalate decarboxylase ARB_02208 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02208 PE=1 SV=1 74 420 5.0E-86
sp|D4B179|OXDC_ARTBC Oxalate decarboxylase ARB_02208 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02208 PE=1 SV=1 124 266 2.0E-10
sp|D4AKL6|OXDD_ARTBC Probable oxalate decarboxylase ARB_04859 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04859 PE=1 SV=1 93 264 2.0E-09
sp|Q6I544|GL52_ORYSJ Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1 321 441 4.0E-07
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1816
MYVPPEVFTIPPIMKLAAASQWLFLAAAGPSSALPGRRDTQQPLTGTPYTPDHRDPYDSKIDPVGQNLDPLPWRN
GKGASVLGPWNRERSRQSPDLVRPPSTDHGAIANMRWSFADSHMRIEEGGWSRQTTIRELPTSVELAGVNMRLDP
GAIRELHWHKQAEWAYVLAGEVRVTAIDYEGGSFIDDLRKGDLWYFPSGVPHSLQGLGENGTEFLLIFDDGNFSE
ESTFLLTDWLAHTPRSVVGENFRLDPGVFKNLPPREKFIFRGSKPGSIDEERPQGKHVKPSNYRFTHRMLDQKPK
YTSGGQVRITDSENFDVSKTVSAAHVIIEPGALREMHWHPTADEWSFFIRGRARITVFAAEGNARTFDYVPGDVG
IVPKNMGHFVENIGDEPVEMLEIFRSDRFRDFSLFQWMGETPRRLVVDHLFQHDEEAGRKFLEKIKDAEKDEVKK
P
Coding >Ophio5|1816
ATGTATGTTCCGCCAGAAGTTTTCACTATTCCTCCCATCATGAAGCTCGCTGCCGCCAGTCAGTGGCTATTCCTT
GCCGCAGCAGGCCCATCGTCGGCCCTACCCGGTCGTCGTGATACGCAACAACCGCTTACCGGCACGCCTTATACC
CCCGACCACCGCGACCCCTACGACAGCAAGATTGACCCTGTGGGTCAAAATCTCGATCCTCTTCCCTGGCGTAAC
GGCAAAGGTGCCTCGGTGCTGGGACCATGGAACCGGGAGCGCTCACGACAGAGCCCGGACCTGGTGCGGCCGCCA
AGCACCGACCACGGCGCCATCGCCAACATGCGATGGAGTTTCGCCGACTCTCACATGCGCATCGAGGAAGGGGGC
TGGAGTAGGCAAACAACAATTCGCGAGCTGCCAACTAGCGTGGAGCTCGCCGGGGTGAATATGCGTCTCGACCCA
GGCGCCATCCGCGAGCTGCACTGGCACAAGCAGGCCGAGTGGGCGTACGTGCTTGCAGGCGAGGTTCGCGTCACG
GCTATCGACTATGAGGGCGGTTCCTTTATCGACGATCTCCGGAAGGGAGACCTGTGGTATTTTCCCAGCGGCGTT
CCTCACTCGCTACAGGGGCTCGGCGAGAACGGCACCGAGTTTCTCCTCATCTTCGACGATGGCAACTTTTCTGAG
GAGTCTACCTTCCTTCTGACCGACTGGCTGGCCCACACGCCCCGGTCCGTCGTCGGGGAAAACTTCCGACTCGAT
CCCGGTGTCTTCAAGAACCTGCCCCCACGCGAGAAGTTCATCTTCCGCGGCTCCAAGCCTGGATCCATCGATGAA
GAGCGGCCTCAGGGCAAGCACGTCAAGCCGTCCAACTACCGCTTCACTCACCGCATGCTCGATCAAAAGCCCAAG
TACACGAGCGGTGGCCAGGTCCGCATTACCGACTCGGAAAACTTTGATGTATCCAAGACGGTTTCCGCGGCGCAC
GTCATCATCGAGCCGGGCGCCCTGCGCGAGATGCATTGGCACCCGACGGCCGACGAGTGGTCTTTCTTCATTCGC
GGCCGGGCCCGCATCACCGTCTTTGCTGCTGAAGGCAACGCCCGCACTTTCGACTACGTACCGGGCGATGTCGGT
ATTGTTCCCAAGAACATGGGTCATTTCGTCGAGAATATTGGTGACGAGCCCGTCGAAATGCTCGAGATCTTTCGC
TCGGACCGATTCCGCGACTTTTCCCTCTTCCAGTGGATGGGCGAGACGCCGCGCCGCTTGGTCGTCGACCACCTC
TTCCAGCATGATGAAGAGGCCGGCCGCAAGTTTTTGGAGAAAATCAAGGATGCGGAAAAGGATGAGGTCAAGAAG
CCG
Transcript >Ophio5|1816
ATGTATGTTCCGCCAGAAGTTTTCACTATTCCTCCCATCATGAAGCTCGCTGCCGCCAGTCAGTGGCTATTCCTT
GCCGCAGCAGGCCCATCGTCGGCCCTACCCGGTCGTCGTGATACGCAACAACCGCTTACCGGCACGCCTTATACC
CCCGACCACCGCGACCCCTACGACAGCAAGATTGACCCTGTGGGTCAAAATCTCGATCCTCTTCCCTGGCGTAAC
GGCAAAGGTGCCTCGGTGCTGGGACCATGGAACCGGGAGCGCTCACGACAGAGCCCGGACCTGGTGCGGCCGCCA
AGCACCGACCACGGCGCCATCGCCAACATGCGATGGAGTTTCGCCGACTCTCACATGCGCATCGAGGAAGGGGGC
TGGAGTAGGCAAACAACAATTCGCGAGCTGCCAACTAGCGTGGAGCTCGCCGGGGTGAATATGCGTCTCGACCCA
GGCGCCATCCGCGAGCTGCACTGGCACAAGCAGGCCGAGTGGGCGTACGTGCTTGCAGGCGAGGTTCGCGTCACG
GCTATCGACTATGAGGGCGGTTCCTTTATCGACGATCTCCGGAAGGGAGACCTGTGGTATTTTCCCAGCGGCGTT
CCTCACTCGCTACAGGGGCTCGGCGAGAACGGCACCGAGTTTCTCCTCATCTTCGACGATGGCAACTTTTCTGAG
GAGTCTACCTTCCTTCTGACCGACTGGCTGGCCCACACGCCCCGGTCCGTCGTCGGGGAAAACTTCCGACTCGAT
CCCGGTGTCTTCAAGAACCTGCCCCCACGCGAGAAGTTCATCTTCCGCGGCTCCAAGCCTGGATCCATCGATGAA
GAGCGGCCTCAGGGCAAGCACGTCAAGCCGTCCAACTACCGCTTCACTCACCGCATGCTCGATCAAAAGCCCAAG
TACACGAGCGGTGGCCAGGTCCGCATTACCGACTCGGAAAACTTTGATGTATCCAAGACGGTTTCCGCGGCGCAC
GTCATCATCGAGCCGGGCGCCCTGCGCGAGATGCATTGGCACCCGACGGCCGACGAGTGGTCTTTCTTCATTCGC
GGCCGGGCCCGCATCACCGTCTTTGCTGCTGAAGGCAACGCCCGCACTTTCGACTACGTACCGGGCGATGTCGGT
ATTGTTCCCAAGAACATGGGTCATTTCGTCGAGAATATTGGTGACGAGCCCGTCGAAATGCTCGAGATCTTTCGC
TCGGACCGATTCCGCGACTTTTCCCTCTTCCAGTGGATGGGCGAGACGCCGCGCCGCTTGGTCGTCGACCACCTC
TTCCAGCATGATGAAGAGGCCGGCCGCAAGTTTTTGGAGAAAATCAAGGATGCGGAAAAGGATGAGGTCAAGAAG
CCGTGA
Gene >Ophio5|1816
ATGTATGTTCGTGAGTTTATGGTTGATCTTTACATCTCGCGGCATCCTCCTTGAATATATACCCTGTGGACCAGA
GCGCCAGAAGTTTTCAGTGAGCTGCTGTCCTCCTCTCCACCTTTTCTTTTGCACCTCATCCCCGAGCTAACCGGC
TCATCATCCAGCTATTCCTCCCATCATGAAGCTCGCTGCCGCCAGTCAGTGGCTATTCCTTGCCGCAGCAGGCCC
ATCGTCGGCCCTACCCGGTCGTCGTGATACGCAACAACCGCTTACCGGCACGCCTTATACCCCCGACCACCGCGA
CCCCTACGACAGCAAGATTGACCCTGTGGGTCAAAATCTCGATCCTCTTCCCTGGCGTAACGGCAAAGGTGCCTC
GGTGCTGGGACCATGGAACCGGGAGCGCTCACGACAGAGCCCGGACCTGGTGCGGCCGCCAAGCACCGACCACGG
CGCCATCGCCAACATGCGATGGAGTTTCGCCGACTCTCACATGCGCATCGAGGTATGTTCTGTATTTCCTCAAAG
CGCGGCCGCGGATGCTCACCAAAGCTGCCTGTAGGAAGGGGGCTGGAGTAGGCAAACAACAATTCGCGAGCTGCC
AACTAGCGTGGAGCTCGCCGGGGTGAATATGCGTCTCGACCCAGGCGCCATCCGCGAGCTGCACTGGCACAAGCA
GGCCGAGTGGGCGTACGTGCTTGCAGGCGAGGTTCGCGTCACGGCTATCGACTATGAGGGCGGTTCCTTTATCGA
CGATCTCCGGAAGGGAGACCTGTGGTATTTTCCCAGCGGCGTTCCTCACTCGCTACAGGGGCTCGGCGAGAACGG
CACCGAGTTTCTCCTCATCTTCGACGATGGCAACTTTTCTGAGGAGTCTACCTTCCTTCTGACCGACTGGCTGGG
TACGTCCAGCCGTTGACCCCCCGTCTTGATCCCCTGTCCGGCAGCTTACCACTACAATAGCCCACACGCCCCGGT
CCGTCGTCGGGGAAAACTTCCGACTCGATCCCGGTGTCTTCAAGAACCTGCCCCCACGCGAGAAGTTCATCTTCC
GCGGCTCCAAGCCTGGATCCATCGATGAAGAGCGGCCTCAGGGCAAGCACGTCAAGCCGTCCAACTACCGCTTCA
CTCACCGCATGCTCGATCAAAAGCCCAAGTACACGAGCGGTGGCCAGGTCCGCATTACCGACTCGGAAAACTTTG
ATGTATCCAAGACGGTTTCCGCGGCGCACGTCATCATCGAGCCGGGCGCCCTGCGCGAGATGCATTGGCACCCGA
CGGCCGACGAGTGGTCTTTCTTCATTCGCGGCCGGGCCCGCATCACCGTCTTTGCTGCTGAAGGCAACGCCCGCA
CTTTCGACTACGTACCGGGCGATGTCGGTATTGTTCCCAAGAACATGGGTCATTTCGTCGAGAATATTGGTGACG
AGCCCGTCGAAATGCTCGAGATCTTTCGCTCGGACCGATTCCGCGACTTTTCCCTCTTCCAGTGGATGGGCGAGA
CGCCGCGCCGCTTGGTCGTCGACCACCTCTTCCAGCATGATGAAGAGGCCGGCCGCAAGTTTTTGGAGAAAATCA
AGGATGCGGAAAAGGATGAGGTCAAGAAGCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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