Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1798
Gene name
Locationscaffold_169:12006..12819
Strand+
Gene length (bp)813
Transcript length (bp)813
Coding sequence length (bp)810
Protein length (aa) 270

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00190 Cupin_1 Cupin 3.0E-17 83 210

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P09350|SR1A_PHYPO Spherulin-1A OS=Physarum polycephalum PE=1 SV=1 43 251 2.0E-48
sp|P09351|SR1B_PHYPO Spherulin-1B OS=Physarum polycephalum PE=2 SV=1 14 251 5.0E-48
sp|Q7XZY1|GL32_ORYSJ Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1 72 235 4.0E-16
sp|Q6K5Q0|GL21_ORYSJ Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1 119 232 8.0E-13
sp|Q9S8P4|RHRE_PEA Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2 92 231 1.0E-12
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|P09350|SR1A_PHYPO Spherulin-1A OS=Physarum polycephalum PE=1 SV=1 43 251 2.0E-48
sp|P09351|SR1B_PHYPO Spherulin-1B OS=Physarum polycephalum PE=2 SV=1 14 251 5.0E-48
sp|Q7XZY1|GL32_ORYSJ Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1 72 235 4.0E-16
sp|Q6K5Q0|GL21_ORYSJ Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1 119 232 8.0E-13
sp|Q9S8P4|RHRE_PEA Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2 92 231 1.0E-12
sp|Q6I544|GL52_ORYSJ Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1 40 234 2.0E-12
sp|Q6YZA9|GL82_ORYSJ Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1 49 232 2.0E-12
sp|Q942A8|GL13_ORYSJ Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1 72 231 5.0E-12
sp|Q6K5P9|GL22_ORYSJ Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1 71 211 8.0E-12
sp|Q6YZA6|GL85_ORYSJ Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1 118 237 1.0E-11
sp|Q6YZA1|GL88_ORYSJ Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1 57 237 2.0E-11
sp|Q6YZ97|GL810_ORYSJ Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1 49 237 2.0E-11
sp|Q6YZ99|GL89_ORYSJ Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1 57 237 2.0E-11
sp|Q2QXJ0|GL124_ORYSJ Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2 118 237 2.0E-11
sp|O65252|GL25_ARATH Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana GN=At5g26700 PE=2 SV=2 70 214 4.0E-11
sp|Q9LEA7|GL18_ARATH Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2 110 211 7.0E-11
sp|Q2QXJ4|GL121_ORYSJ Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1 118 237 8.0E-11
sp|Q6YZA4|GL86_ORYSJ Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1 57 237 9.0E-11
sp|Q6YZZ6|GL84_ORYSJ Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1 118 232 1.0E-10
sp|Q6YZZ2|GL87_ORYSJ Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1 57 237 1.0E-10
sp|Q75HJ4|GL38_ORYSJ Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1 75 231 2.0E-10
sp|Q6K5P8|GL23_ORYSJ Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1 84 217 2.0E-10
sp|Q9M263|GL24_ARATH Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1 118 231 3.0E-10
sp|Q6YZZ7|GL83_ORYSJ Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1 118 237 3.0E-10
sp|Q8H021|GL31_ORYSJ Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=3 SV=1 95 228 4.0E-10
sp|Q7XSN6|GL41_ORYSJ Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2 85 232 4.0E-10
sp|Q6YZY5|GL811_ORYSJ Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1 49 237 5.0E-10
sp|Q2QXJ2|GL122_ORYSJ Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1 118 237 6.0E-10
sp|Q6YZB2|GL81_ORYSJ Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1 119 232 7.0E-10
sp|Q6ZCR3|GL812_ORYSJ Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1 118 237 8.0E-10
sp|Q9SR72|GL32_ARATH Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1 72 205 8.0E-10
sp|Q9M8X6|GL16_ARATH Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1 122 217 9.0E-10
sp|P93000|GL23_ARATH Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1 75 235 9.0E-10
sp|P92998|GL11_ARATH Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2 97 231 1.0E-09
sp|P45852|GLP1_MESCR Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1 99 211 1.0E-09
sp|Q94EG3|NEC1_NICLS Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1 92 232 2.0E-09
sp|P92995|GLT1_ARATH Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2 88 216 2.0E-09
sp|Q2QXJ1|GL123_ORYSJ Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1 118 237 2.0E-09
sp|Q9SPV5|NEC1_NICPL Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1 92 232 2.0E-09
sp|Q851K1|GL36_ORYSJ Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1 118 231 3.0E-09
sp|Q851K0|GL35_ORYSJ Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1 118 216 3.0E-09
sp|Q851J8|GL33_ORYSJ Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1 118 216 4.0E-09
sp|Q851J9|GL34_ORYSJ Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1 118 216 5.0E-09
sp|Q9SFF9|GL17_ARATH Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1 118 217 6.0E-09
sp|Q9LMC9|GLT2_ARATH Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1 98 216 7.0E-09
sp|P15290|GER2_WHEAT Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1 118 231 1.0E-08
sp|Q94JF3|GL12_ORYSJ Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=3 SV=1 49 209 1.0E-08
sp|Q652P9|GL93_ORYSJ Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1 98 205 2.0E-08
sp|Q652Q0|GL92_ORYSJ Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1 71 190 2.0E-08
sp|Q6ESF0|GL24_ORYSJ Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1 122 221 2.0E-08
sp|P45851|OXO2_HORVU Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1 118 231 3.0E-08
sp|P45850|OXO1_HORVU Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1 118 216 3.0E-08
sp|Q9FMB0|GL19_ARATH Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=3 SV=1 72 229 3.0E-08
sp|Q9FZ27|GL22_ARATH Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1 119 216 4.0E-08
sp|Q9FMA8|GL111_ARATH Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1 122 211 5.0E-08
sp|P94014|GL21_ARATH Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=2 92 211 5.0E-08
sp|Q652Q1|GL91_ORYSJ Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1 98 178 9.0E-08
sp|Q10BU2|GL37_ORYSJ Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1 101 231 1.0E-07
sp|Q942A7|GL14_ORYSJ Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=1 SV=1 92 231 1.0E-07
sp|O04012|AB19B_PRUPE Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1 98 234 2.0E-07
sp|P92997|GL113_ARATH Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=2 75 213 2.0E-07
sp|Q9FID0|GL114_ARATH Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=3 SV=1 118 213 2.0E-07
sp|Q9FIC6|GL117_ARATH Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1 118 213 2.0E-07
sp|Q9FIC9|GL115_ARATH Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1 118 213 2.0E-07
sp|Q9FL89|GL119_ARATH Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1 118 213 6.0E-07
sp|Q9ZRA4|AB19A_PRUPE Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1 98 234 8.0E-07
sp|P26759|GER3_WHEAT Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1 118 211 1.0E-06
sp|Q9FMA6|GL112_ARATH Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=3 SV=1 75 211 1.0E-06
sp|Q9FMA9|GL110_ARATH Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=3 SV=1 122 211 1.0E-06
sp|L8BRS3|GLP1_MORAL Germin-like protein OS=Morus alba PE=1 SV=1 118 214 2.0E-06
sp|Q6ZBZ2|GL814_ORYSJ Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1 127 197 3.0E-06
sp|Q6Z964|GL813_ORYSJ Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=3 SV=1 97 206 5.0E-06
sp|P92996|GL120_ARATH Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1 118 217 7.0E-06
sp|P92999|GL118_ARATH Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2 118 217 7.0E-06
sp|Q9FIC8|GL116_ARATH Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1 118 217 8.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 0.24 0.0 0.81
CcL In ants, during behavior modification 0.16 0.0 0.53
CcD In ants, recently dead 0.07 0.0 0.44

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 1.0 no
SC16a CcD 1.0 no
CcL CcD 1.0 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1798
MRFLGLSSTLLLLLASTATAAPSSKPNGEDINSILPPIVPFNTRSGNSDLIAKLITAPTQVDRFMLLDQPGDFVF
DFNGNSTTSGPRTQGRGGFTLAATAQTMPALIGNGGAMTVGFLGPCGMNTPHVHNRATELNIIVQGRLATNFIVE
NGVRPIQNLLSRFQMAVFPQGAIHMEFNPDCQDAVFVAGFNNPDPGVGQIAQNFFSLRPDVVSATLGGVPTINGK
DIETFRGMIPDNVALGIDACLKKCGIKRNEKRSIEEVLAGSMASL
Coding >Ophio5|1798
ATGCGTTTTCTCGGCCTCTCTTCCACCCTCCTCCTCCTCCTGGCGAGCACCGCAACCGCCGCCCCATCCTCAAAG
CCCAACGGGGAAGACATCAACTCGATTCTTCCCCCCATCGTGCCCTTCAACACCCGTTCGGGCAACAGCGACCTC
ATCGCCAAGCTGATAACAGCTCCCACACAAGTCGACCGCTTCATGCTCCTCGACCAACCCGGCGACTTCGTCTTC
GACTTCAACGGCAACAGCACCACGTCAGGTCCCAGGACCCAAGGCAGAGGCGGCTTCACCCTCGCCGCCACGGCA
CAAACAATGCCAGCCCTCATCGGTAACGGCGGAGCCATGACAGTTGGCTTTCTCGGCCCATGTGGCATGAACACG
CCTCACGTGCATAACCGAGCAACTGAGCTCAACATCATTGTCCAAGGCCGGCTTGCAACCAACTTTATAGTCGAG
AACGGCGTGCGACCGATTCAGAACCTGCTATCGCGCTTTCAAATGGCCGTGTTTCCCCAGGGCGCTATCCACATG
GAGTTCAATCCTGATTGTCAAGATGCCGTCTTCGTCGCAGGCTTTAACAACCCGGATCCAGGCGTCGGTCAGATT
GCGCAGAACTTCTTCAGCTTGCGGCCTGATGTGGTGAGTGCGACGTTGGGAGGGGTACCGACGATCAATGGTAAG
GATATCGAGACGTTTCGTGGTATGATTCCCGACAATGTTGCTCTAGGTATCGATGCTTGCTTGAAGAAGTGTGGA
ATCAAGCGTAATGAGAAGAGGAGCATCGAGGAAGTGCTTGCCGGGTCCATGGCAAGTCTG
Transcript >Ophio5|1798
ATGCGTTTTCTCGGCCTCTCTTCCACCCTCCTCCTCCTCCTGGCGAGCACCGCAACCGCCGCCCCATCCTCAAAG
CCCAACGGGGAAGACATCAACTCGATTCTTCCCCCCATCGTGCCCTTCAACACCCGTTCGGGCAACAGCGACCTC
ATCGCCAAGCTGATAACAGCTCCCACACAAGTCGACCGCTTCATGCTCCTCGACCAACCCGGCGACTTCGTCTTC
GACTTCAACGGCAACAGCACCACGTCAGGTCCCAGGACCCAAGGCAGAGGCGGCTTCACCCTCGCCGCCACGGCA
CAAACAATGCCAGCCCTCATCGGTAACGGCGGAGCCATGACAGTTGGCTTTCTCGGCCCATGTGGCATGAACACG
CCTCACGTGCATAACCGAGCAACTGAGCTCAACATCATTGTCCAAGGCCGGCTTGCAACCAACTTTATAGTCGAG
AACGGCGTGCGACCGATTCAGAACCTGCTATCGCGCTTTCAAATGGCCGTGTTTCCCCAGGGCGCTATCCACATG
GAGTTCAATCCTGATTGTCAAGATGCCGTCTTCGTCGCAGGCTTTAACAACCCGGATCCAGGCGTCGGTCAGATT
GCGCAGAACTTCTTCAGCTTGCGGCCTGATGTGGTGAGTGCGACGTTGGGAGGGGTACCGACGATCAATGGTAAG
GATATCGAGACGTTTCGTGGTATGATTCCCGACAATGTTGCTCTAGGTATCGATGCTTGCTTGAAGAAGTGTGGA
ATCAAGCGTAATGAGAAGAGGAGCATCGAGGAAGTGCTTGCCGGGTCCATGGCAAGTCTGTGA
Gene >Ophio5|1798
ATGCGTTTTCTCGGCCTCTCTTCCACCCTCCTCCTCCTCCTGGCGAGCACCGCAACCGCCGCCCCATCCTCAAAG
CCCAACGGGGAAGACATCAACTCGATTCTTCCCCCCATCGTGCCCTTCAACACCCGTTCGGGCAACAGCGACCTC
ATCGCCAAGCTGATAACAGCTCCCACACAAGTCGACCGCTTCATGCTCCTCGACCAACCCGGCGACTTCGTCTTC
GACTTCAACGGCAACAGCACCACGTCAGGTCCCAGGACCCAAGGCAGAGGCGGCTTCACCCTCGCCGCCACGGCA
CAAACAATGCCAGCCCTCATCGGTAACGGCGGAGCCATGACAGTTGGCTTTCTCGGCCCATGTGGCATGAACACG
CCTCACGTGCATAACCGAGCAACTGAGCTCAACATCATTGTCCAAGGCCGGCTTGCAACCAACTTTATAGTCGAG
AACGGCGTGCGACCGATTCAGAACCTGCTATCGCGCTTTCAAATGGCCGTGTTTCCCCAGGGCGCTATCCACATG
GAGTTCAATCCTGATTGTCAAGATGCCGTCTTCGTCGCAGGCTTTAACAACCCGGATCCAGGCGTCGGTCAGATT
GCGCAGAACTTCTTCAGCTTGCGGCCTGATGTGGTGAGTGCGACGTTGGGAGGGGTACCGACGATCAATGGTAAG
GATATCGAGACGTTTCGTGGTATGATTCCCGACAATGTTGCTCTAGGTATCGATGCTTGCTTGAAGAAGTGTGGA
ATCAAGCGTAATGAGAAGAGGAGCATCGAGGAAGTGCTTGCCGGGTCCATGGCAAGTCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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