© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|1798 |
| Gene name | |
| Location | scaffold_169:12006..12819 |
| Strand | + |
| Gene length (bp) | 813 |
| Transcript length (bp) | 813 |
| Coding sequence length (bp) | 810 |
| Protein length (aa) | 270 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00190 | Cupin_1 | Cupin | 3.0E-17 | 83 | 210 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P09350|SR1A_PHYPO | Spherulin-1A OS=Physarum polycephalum PE=1 SV=1 | 43 | 251 | 2.0E-48 |
| sp|P09351|SR1B_PHYPO | Spherulin-1B OS=Physarum polycephalum PE=2 SV=1 | 14 | 251 | 5.0E-48 |
| sp|Q7XZY1|GL32_ORYSJ | Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1 | 72 | 235 | 4.0E-16 |
| sp|Q6K5Q0|GL21_ORYSJ | Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1 | 119 | 232 | 8.0E-13 |
| sp|Q9S8P4|RHRE_PEA | Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2 | 92 | 231 | 1.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P09350|SR1A_PHYPO | Spherulin-1A OS=Physarum polycephalum PE=1 SV=1 | 43 | 251 | 2.0E-48 |
| sp|P09351|SR1B_PHYPO | Spherulin-1B OS=Physarum polycephalum PE=2 SV=1 | 14 | 251 | 5.0E-48 |
| sp|Q7XZY1|GL32_ORYSJ | Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1 | 72 | 235 | 4.0E-16 |
| sp|Q6K5Q0|GL21_ORYSJ | Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1 | 119 | 232 | 8.0E-13 |
| sp|Q9S8P4|RHRE_PEA | Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2 | 92 | 231 | 1.0E-12 |
| sp|Q6I544|GL52_ORYSJ | Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1 | 40 | 234 | 2.0E-12 |
| sp|Q6YZA9|GL82_ORYSJ | Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1 | 49 | 232 | 2.0E-12 |
| sp|Q942A8|GL13_ORYSJ | Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1 | 72 | 231 | 5.0E-12 |
| sp|Q6K5P9|GL22_ORYSJ | Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1 | 71 | 211 | 8.0E-12 |
| sp|Q6YZA6|GL85_ORYSJ | Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1 | 118 | 237 | 1.0E-11 |
| sp|Q6YZA1|GL88_ORYSJ | Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1 | 57 | 237 | 2.0E-11 |
| sp|Q6YZ97|GL810_ORYSJ | Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1 | 49 | 237 | 2.0E-11 |
| sp|Q6YZ99|GL89_ORYSJ | Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1 | 57 | 237 | 2.0E-11 |
| sp|Q2QXJ0|GL124_ORYSJ | Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2 | 118 | 237 | 2.0E-11 |
| sp|O65252|GL25_ARATH | Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana GN=At5g26700 PE=2 SV=2 | 70 | 214 | 4.0E-11 |
| sp|Q9LEA7|GL18_ARATH | Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2 | 110 | 211 | 7.0E-11 |
| sp|Q2QXJ4|GL121_ORYSJ | Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1 | 118 | 237 | 8.0E-11 |
| sp|Q6YZA4|GL86_ORYSJ | Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1 | 57 | 237 | 9.0E-11 |
| sp|Q6YZZ6|GL84_ORYSJ | Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1 | 118 | 232 | 1.0E-10 |
| sp|Q6YZZ2|GL87_ORYSJ | Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1 | 57 | 237 | 1.0E-10 |
| sp|Q75HJ4|GL38_ORYSJ | Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1 | 75 | 231 | 2.0E-10 |
| sp|Q6K5P8|GL23_ORYSJ | Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1 | 84 | 217 | 2.0E-10 |
| sp|Q9M263|GL24_ARATH | Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1 | 118 | 231 | 3.0E-10 |
| sp|Q6YZZ7|GL83_ORYSJ | Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1 | 118 | 237 | 3.0E-10 |
| sp|Q8H021|GL31_ORYSJ | Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=3 SV=1 | 95 | 228 | 4.0E-10 |
| sp|Q7XSN6|GL41_ORYSJ | Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2 | 85 | 232 | 4.0E-10 |
| sp|Q6YZY5|GL811_ORYSJ | Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1 | 49 | 237 | 5.0E-10 |
| sp|Q2QXJ2|GL122_ORYSJ | Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1 | 118 | 237 | 6.0E-10 |
| sp|Q6YZB2|GL81_ORYSJ | Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1 | 119 | 232 | 7.0E-10 |
| sp|Q6ZCR3|GL812_ORYSJ | Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1 | 118 | 237 | 8.0E-10 |
| sp|Q9SR72|GL32_ARATH | Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1 | 72 | 205 | 8.0E-10 |
| sp|Q9M8X6|GL16_ARATH | Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1 | 122 | 217 | 9.0E-10 |
| sp|P93000|GL23_ARATH | Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1 | 75 | 235 | 9.0E-10 |
| sp|P92998|GL11_ARATH | Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2 | 97 | 231 | 1.0E-09 |
| sp|P45852|GLP1_MESCR | Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1 | 99 | 211 | 1.0E-09 |
| sp|Q94EG3|NEC1_NICLS | Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1 | 92 | 232 | 2.0E-09 |
| sp|P92995|GLT1_ARATH | Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2 | 88 | 216 | 2.0E-09 |
| sp|Q2QXJ1|GL123_ORYSJ | Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1 | 118 | 237 | 2.0E-09 |
| sp|Q9SPV5|NEC1_NICPL | Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1 | 92 | 232 | 2.0E-09 |
| sp|Q851K1|GL36_ORYSJ | Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1 | 118 | 231 | 3.0E-09 |
| sp|Q851K0|GL35_ORYSJ | Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1 | 118 | 216 | 3.0E-09 |
| sp|Q851J8|GL33_ORYSJ | Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1 | 118 | 216 | 4.0E-09 |
| sp|Q851J9|GL34_ORYSJ | Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1 | 118 | 216 | 5.0E-09 |
| sp|Q9SFF9|GL17_ARATH | Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1 | 118 | 217 | 6.0E-09 |
| sp|Q9LMC9|GLT2_ARATH | Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1 | 98 | 216 | 7.0E-09 |
| sp|P15290|GER2_WHEAT | Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1 | 118 | 231 | 1.0E-08 |
| sp|Q94JF3|GL12_ORYSJ | Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=3 SV=1 | 49 | 209 | 1.0E-08 |
| sp|Q652P9|GL93_ORYSJ | Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1 | 98 | 205 | 2.0E-08 |
| sp|Q652Q0|GL92_ORYSJ | Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1 | 71 | 190 | 2.0E-08 |
| sp|Q6ESF0|GL24_ORYSJ | Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1 | 122 | 221 | 2.0E-08 |
| sp|P45851|OXO2_HORVU | Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1 | 118 | 231 | 3.0E-08 |
| sp|P45850|OXO1_HORVU | Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1 | 118 | 216 | 3.0E-08 |
| sp|Q9FMB0|GL19_ARATH | Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=3 SV=1 | 72 | 229 | 3.0E-08 |
| sp|Q9FZ27|GL22_ARATH | Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1 | 119 | 216 | 4.0E-08 |
| sp|Q9FMA8|GL111_ARATH | Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1 | 122 | 211 | 5.0E-08 |
| sp|P94014|GL21_ARATH | Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=2 | 92 | 211 | 5.0E-08 |
| sp|Q652Q1|GL91_ORYSJ | Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1 | 98 | 178 | 9.0E-08 |
| sp|Q10BU2|GL37_ORYSJ | Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1 | 101 | 231 | 1.0E-07 |
| sp|Q942A7|GL14_ORYSJ | Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=1 SV=1 | 92 | 231 | 1.0E-07 |
| sp|O04012|AB19B_PRUPE | Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1 | 98 | 234 | 2.0E-07 |
| sp|P92997|GL113_ARATH | Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=2 | 75 | 213 | 2.0E-07 |
| sp|Q9FID0|GL114_ARATH | Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=3 SV=1 | 118 | 213 | 2.0E-07 |
| sp|Q9FIC6|GL117_ARATH | Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1 | 118 | 213 | 2.0E-07 |
| sp|Q9FIC9|GL115_ARATH | Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1 | 118 | 213 | 2.0E-07 |
| sp|Q9FL89|GL119_ARATH | Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1 | 118 | 213 | 6.0E-07 |
| sp|Q9ZRA4|AB19A_PRUPE | Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1 | 98 | 234 | 8.0E-07 |
| sp|P26759|GER3_WHEAT | Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1 | 118 | 211 | 1.0E-06 |
| sp|Q9FMA6|GL112_ARATH | Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=3 SV=1 | 75 | 211 | 1.0E-06 |
| sp|Q9FMA9|GL110_ARATH | Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=3 SV=1 | 122 | 211 | 1.0E-06 |
| sp|L8BRS3|GLP1_MORAL | Germin-like protein OS=Morus alba PE=1 SV=1 | 118 | 214 | 2.0E-06 |
| sp|Q6ZBZ2|GL814_ORYSJ | Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1 | 127 | 197 | 3.0E-06 |
| sp|Q6Z964|GL813_ORYSJ | Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=3 SV=1 | 97 | 206 | 5.0E-06 |
| sp|P92996|GL120_ARATH | Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1 | 118 | 217 | 7.0E-06 |
| sp|P92999|GL118_ARATH | Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2 | 118 | 217 | 7.0E-06 |
| sp|Q9FIC8|GL116_ARATH | Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1 | 118 | 217 | 8.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1798 MRFLGLSSTLLLLLASTATAAPSSKPNGEDINSILPPIVPFNTRSGNSDLIAKLITAPTQVDRFMLLDQPGDFVF DFNGNSTTSGPRTQGRGGFTLAATAQTMPALIGNGGAMTVGFLGPCGMNTPHVHNRATELNIIVQGRLATNFIVE NGVRPIQNLLSRFQMAVFPQGAIHMEFNPDCQDAVFVAGFNNPDPGVGQIAQNFFSLRPDVVSATLGGVPTINGK DIETFRGMIPDNVALGIDACLKKCGIKRNEKRSIEEVLAGSMASL |
| Coding | >Ophio5|1798 ATGCGTTTTCTCGGCCTCTCTTCCACCCTCCTCCTCCTCCTGGCGAGCACCGCAACCGCCGCCCCATCCTCAAAG CCCAACGGGGAAGACATCAACTCGATTCTTCCCCCCATCGTGCCCTTCAACACCCGTTCGGGCAACAGCGACCTC ATCGCCAAGCTGATAACAGCTCCCACACAAGTCGACCGCTTCATGCTCCTCGACCAACCCGGCGACTTCGTCTTC GACTTCAACGGCAACAGCACCACGTCAGGTCCCAGGACCCAAGGCAGAGGCGGCTTCACCCTCGCCGCCACGGCA CAAACAATGCCAGCCCTCATCGGTAACGGCGGAGCCATGACAGTTGGCTTTCTCGGCCCATGTGGCATGAACACG CCTCACGTGCATAACCGAGCAACTGAGCTCAACATCATTGTCCAAGGCCGGCTTGCAACCAACTTTATAGTCGAG AACGGCGTGCGACCGATTCAGAACCTGCTATCGCGCTTTCAAATGGCCGTGTTTCCCCAGGGCGCTATCCACATG GAGTTCAATCCTGATTGTCAAGATGCCGTCTTCGTCGCAGGCTTTAACAACCCGGATCCAGGCGTCGGTCAGATT GCGCAGAACTTCTTCAGCTTGCGGCCTGATGTGGTGAGTGCGACGTTGGGAGGGGTACCGACGATCAATGGTAAG GATATCGAGACGTTTCGTGGTATGATTCCCGACAATGTTGCTCTAGGTATCGATGCTTGCTTGAAGAAGTGTGGA ATCAAGCGTAATGAGAAGAGGAGCATCGAGGAAGTGCTTGCCGGGTCCATGGCAAGTCTG |
| Transcript | >Ophio5|1798 ATGCGTTTTCTCGGCCTCTCTTCCACCCTCCTCCTCCTCCTGGCGAGCACCGCAACCGCCGCCCCATCCTCAAAG CCCAACGGGGAAGACATCAACTCGATTCTTCCCCCCATCGTGCCCTTCAACACCCGTTCGGGCAACAGCGACCTC ATCGCCAAGCTGATAACAGCTCCCACACAAGTCGACCGCTTCATGCTCCTCGACCAACCCGGCGACTTCGTCTTC GACTTCAACGGCAACAGCACCACGTCAGGTCCCAGGACCCAAGGCAGAGGCGGCTTCACCCTCGCCGCCACGGCA CAAACAATGCCAGCCCTCATCGGTAACGGCGGAGCCATGACAGTTGGCTTTCTCGGCCCATGTGGCATGAACACG CCTCACGTGCATAACCGAGCAACTGAGCTCAACATCATTGTCCAAGGCCGGCTTGCAACCAACTTTATAGTCGAG AACGGCGTGCGACCGATTCAGAACCTGCTATCGCGCTTTCAAATGGCCGTGTTTCCCCAGGGCGCTATCCACATG GAGTTCAATCCTGATTGTCAAGATGCCGTCTTCGTCGCAGGCTTTAACAACCCGGATCCAGGCGTCGGTCAGATT GCGCAGAACTTCTTCAGCTTGCGGCCTGATGTGGTGAGTGCGACGTTGGGAGGGGTACCGACGATCAATGGTAAG GATATCGAGACGTTTCGTGGTATGATTCCCGACAATGTTGCTCTAGGTATCGATGCTTGCTTGAAGAAGTGTGGA ATCAAGCGTAATGAGAAGAGGAGCATCGAGGAAGTGCTTGCCGGGTCCATGGCAAGTCTGTGA |
| Gene | >Ophio5|1798 ATGCGTTTTCTCGGCCTCTCTTCCACCCTCCTCCTCCTCCTGGCGAGCACCGCAACCGCCGCCCCATCCTCAAAG CCCAACGGGGAAGACATCAACTCGATTCTTCCCCCCATCGTGCCCTTCAACACCCGTTCGGGCAACAGCGACCTC ATCGCCAAGCTGATAACAGCTCCCACACAAGTCGACCGCTTCATGCTCCTCGACCAACCCGGCGACTTCGTCTTC GACTTCAACGGCAACAGCACCACGTCAGGTCCCAGGACCCAAGGCAGAGGCGGCTTCACCCTCGCCGCCACGGCA CAAACAATGCCAGCCCTCATCGGTAACGGCGGAGCCATGACAGTTGGCTTTCTCGGCCCATGTGGCATGAACACG CCTCACGTGCATAACCGAGCAACTGAGCTCAACATCATTGTCCAAGGCCGGCTTGCAACCAACTTTATAGTCGAG AACGGCGTGCGACCGATTCAGAACCTGCTATCGCGCTTTCAAATGGCCGTGTTTCCCCAGGGCGCTATCCACATG GAGTTCAATCCTGATTGTCAAGATGCCGTCTTCGTCGCAGGCTTTAACAACCCGGATCCAGGCGTCGGTCAGATT GCGCAGAACTTCTTCAGCTTGCGGCCTGATGTGGTGAGTGCGACGTTGGGAGGGGTACCGACGATCAATGGTAAG GATATCGAGACGTTTCGTGGTATGATTCCCGACAATGTTGCTCTAGGTATCGATGCTTGCTTGAAGAAGTGTGGA ATCAAGCGTAATGAGAAGAGGAGCATCGAGGAAGTGCTTGCCGGGTCCATGGCAAGTCTGTGA |