Protein ID | Ophio5|178 |
Gene name | |
Location | scaffold_1027:505..3422 |
Strand | + |
Gene length (bp) | 2917 |
Transcript length (bp) | 2085 |
Coding sequence length (bp) | 2082 |
Protein length (aa) | 694 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00172 | Zn_clus | Fungal Zn(2)-Cys(6) binuclear cluster domain | 1.6E-07 | 82 | 115 |
PF11951 | Fungal_trans_2 | Fungal specific transcription factor domain | 8.5E-05 | 204 | 293 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q12151|UPC2_YEAST | Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 | 73 | 112 | 2.0E-09 |
sp|Q59QC7|UPC2_CANAL | Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 | 73 | 112 | 3.0E-09 |
sp|Q05958|ECM22_YEAST | Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 | 73 | 116 | 8.0E-09 |
sp|Q59QC7|UPC2_CANAL | Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 | 170 | 308 | 2.0E-07 |
sp|Q05958|ECM22_YEAST | Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 | 170 | 308 | 3.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006355 | regulation of transcription, DNA-templated | Yes |
GO:0008270 | zinc ion binding | Yes |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Yes |
GO:0008150 | biological_process | No |
GO:0051252 | regulation of RNA metabolic process | No |
GO:0060255 | regulation of macromolecule metabolic process | No |
GO:0019222 | regulation of metabolic process | No |
GO:0050794 | regulation of cellular process | No |
GO:0140110 | transcription regulator activity | No |
GO:0031323 | regulation of cellular metabolic process | No |
GO:0065007 | biological regulation | No |
GO:0046872 | metal ion binding | No |
GO:0010468 | regulation of gene expression | No |
GO:0043167 | ion binding | No |
GO:0043169 | cation binding | No |
GO:0003674 | molecular_function | No |
GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
GO:0051171 | regulation of nitrogen compound metabolic process | No |
GO:0005488 | binding | No |
GO:0080090 | regulation of primary metabolic process | No |
GO:0009889 | regulation of biosynthetic process | No |
GO:0050789 | regulation of biological process | No |
GO:0003700 | DNA-binding transcription factor activity | No |
GO:1903506 | regulation of nucleic acid-templated transcription | No |
GO:2001141 | regulation of RNA biosynthetic process | No |
GO:0046914 | transition metal ion binding | No |
GO:0010556 | regulation of macromolecule biosynthetic process | No |
GO:0031326 | regulation of cellular biosynthetic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
Fungal Specific TF |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|178 MPMQSDPTHKPGRLLYVRRPTLLSIWHRHFTPLSSLATSVPRRQGCLVWFCFHVSRFPSDNTTMAGPGGGPPRRS HTKSRKGCETCKRRHIRCDENFPQCRNCTKHKIRCPYNDVQVPDADRSTTPDKPDLMWTPQIEAVIADWQATGVF PLPSLDVYPAPVPQMYSVEDLRLIYHVASLYHELASIDANNFTLWTRHIPTLLRIGATTPYVMHALLAFSAMHIA FLTDCPLVGSMAFEHRGVALSGLHEAIGSFSRDSSDAILAASLVLSWQATDWRSWTQLMQGTSTVIDAMDAWKHE SQFGDFIAESSTFPTAPPSPGPDHRPSQPRDEDIRASQRTLEQVQKVEAHLKRNKEETTQIQHLIGFLKGARKIS PSLSIAAQYERLQPLRTWLFWMPVGYLQTQHGSPNSLVIIAHLYTVALLMERLFPEIGAAYFGSLSISPVEEIAR RLMSISVAGGHDGRAQQQTPLTLMEFPIDTVHEFRTRMGWVHPERTPSFPQFHPPNFPVGDELAAPYGNVSFSYS ADEMSMLNSASMPGLPQPPVSPSVLSSPYAHQQYLSIPSPSFPGAYSPASSTFEGSVAHSDSEEYGPFSAYHQPS VLSEAHRSFGVGNSPGGSATTASSYPPPEDSGAPSPYLHPEKPRIPESPEPLQLGRHRHSASASSCWHPSSPLAR APLVPPSDLPDRKGKRRAA |
Coding | >Ophio5|178 ATGCCCATGCAATCCGACCCGACGCACAAGCCGGGTCGACTCTTATACGTCCGACGCCCAACACTCCTCTCCATC TGGCATCGCCACTTCACACCTCTTTCCTCGCTCGCTACCTCTGTTCCCCGACGCCAGGGCTGCCTCGTGTGGTTT TGCTTCCACGTCTCTCGCTTCCCGTCGGATAATACGACTATGGCGGGTCCCGGTGGCGGTCCTCCTCGCCGCAGT CACACCAAGTCCCGCAAGGGCTGTGAAACCTGCAAGCGTCGCCATATCCGCTGCGATGAAAACTTCCCTCAGTGC CGCAACTGCACCAAGCACAAGATTCGCTGTCCGTACAATGACGTCCAGGTTCCTGACGCCGACCGCTCAACCACC CCGGACAAGCCCGACCTCATGTGGACGCCCCAAATCGAGGCTGTCATTGCCGACTGGCAGGCCACCGGTGTCTTC CCCCTCCCGTCTCTCGACGTCTATCCGGCTCCTGTGCCGCAAATGTACTCGGTCGAGGATCTTCGTCTCATCTAC CACGTTGCTAGCCTCTACCACGAGCTTGCCTCGATCGATGCCAATAACTTCACCCTGTGGACCCGTCATATCCCA ACCCTGCTGAGGATCGGGGCGACGACCCCCTACGTCATGCATGCACTGCTCGCCTTCTCCGCCATGCACATTGCC TTTCTCACCGACTGCCCCTTGGTCGGCAGCATGGCCTTTGAGCACCGCGGTGTCGCCCTCAGTGGCCTGCACGAG GCCATCGGTTCATTTTCCCGCGACTCCTCGGATGCCATTCTCGCCGCCTCGCTCGTCCTCTCTTGGCAGGCCACA GACTGGCGCAGCTGGACCCAGCTGATGCAGGGGACCTCGACGGTCATCGACGCCATGGATGCCTGGAAGCATGAG TCTCAGTTCGGCGACTTCATTGCCGAGAGTAGCACGTTCCCCACGGCGCCGCCGTCGCCCGGCCCCGACCACCGG CCGAGCCAGCCGCGCGACGAAGACATTCGCGCCTCGCAGCGGACGTTGGAGCAGGTGCAAAAGGTCGAGGCCCAT CTCAAGCGCAACAAGGAGGAGACTACGCAGATCCAGCACCTCATCGGCTTCCTCAAGGGCGCCCGCAAGATTAGC CCCTCGCTCTCCATCGCGGCCCAGTACGAGCGGCTCCAGCCGCTGAGGACCTGGCTCTTTTGGATGCCGGTGGGA TATCTGCAGACGCAGCACGGCTCGCCCAACTCGCTCGTCATCATCGCCCACCTCTACACGGTGGCCCTGCTCATG GAGCGTCTCTTCCCCGAGATCGGCGCCGCCTACTTTGGCAGCCTCTCCATCTCGCCCGTCGAGGAGATTGCGCGC CGGCTCATGTCCATTAGCGTCGCCGGCGGCCACGACGGACGTGCCCAGCAGCAGACGCCCCTGACGCTGATGGAG TTCCCCATCGACACGGTGCACGAGTTCCGCACGCGCATGGGCTGGGTTCATCCGGAGAGGACGCCGTCGTTCCCG CAGTTCCACCCGCCCAACTTCCCCGTCGGCGATGAGCTGGCGGCGCCCTACGGCAACGTGTCGTTCAGCTACAGC GCCGACGAAATGTCGATGCTCAACAGCGCCTCGATGCCGGGGCTCCCGCAGCCGCCGGTGAGCCCGTCGGTGCTG TCGTCGCCCTACGCGCACCAGCAGTACCTCAGCATCCCTTCGCCGTCGTTCCCGGGGGCCTACAGCCCGGCGTCG TCGACGTTTGAGGGCTCCGTCGCCCACAGCGACTCGGAGGAGTACGGGCCCTTTAGTGCCTACCACCAGCCGTCC GTGTTGAGCGAGGCGCATCGCAGCTTCGGCGTCGGGAACTCGCCCGGCGGCTCGGCCACGACGGCGTCATCGTAT CCGCCCCCGGAGGACTCCGGAGCCCCGTCCCCCTACCTCCACCCAGAGAAGCCCCGGATCCCCGAGTCCCCCGAG CCGCTCCAACTCGGGCGCCACCGCCACTCGGCCTCGGCCTCTTCCTGCTGGCACCCGTCGTCCCCCCTGGCGCGA GCGCCGCTGGTGCCGCCCTCGGACCTGCCCGATAGGAAGGGCAAGAGGCGCGCTGCC |
Transcript | >Ophio5|178 ATGCCCATGCAATCCGACCCGACGCACAAGCCGGGTCGACTCTTATACGTCCGACGCCCAACACTCCTCTCCATC TGGCATCGCCACTTCACACCTCTTTCCTCGCTCGCTACCTCTGTTCCCCGACGCCAGGGCTGCCTCGTGTGGTTT TGCTTCCACGTCTCTCGCTTCCCGTCGGATAATACGACTATGGCGGGTCCCGGTGGCGGTCCTCCTCGCCGCAGT CACACCAAGTCCCGCAAGGGCTGTGAAACCTGCAAGCGTCGCCATATCCGCTGCGATGAAAACTTCCCTCAGTGC CGCAACTGCACCAAGCACAAGATTCGCTGTCCGTACAATGACGTCCAGGTTCCTGACGCCGACCGCTCAACCACC CCGGACAAGCCCGACCTCATGTGGACGCCCCAAATCGAGGCTGTCATTGCCGACTGGCAGGCCACCGGTGTCTTC CCCCTCCCGTCTCTCGACGTCTATCCGGCTCCTGTGCCGCAAATGTACTCGGTCGAGGATCTTCGTCTCATCTAC CACGTTGCTAGCCTCTACCACGAGCTTGCCTCGATCGATGCCAATAACTTCACCCTGTGGACCCGTCATATCCCA ACCCTGCTGAGGATCGGGGCGACGACCCCCTACGTCATGCATGCACTGCTCGCCTTCTCCGCCATGCACATTGCC TTTCTCACCGACTGCCCCTTGGTCGGCAGCATGGCCTTTGAGCACCGCGGTGTCGCCCTCAGTGGCCTGCACGAG GCCATCGGTTCATTTTCCCGCGACTCCTCGGATGCCATTCTCGCCGCCTCGCTCGTCCTCTCTTGGCAGGCCACA GACTGGCGCAGCTGGACCCAGCTGATGCAGGGGACCTCGACGGTCATCGACGCCATGGATGCCTGGAAGCATGAG TCTCAGTTCGGCGACTTCATTGCCGAGAGTAGCACGTTCCCCACGGCGCCGCCGTCGCCCGGCCCCGACCACCGG CCGAGCCAGCCGCGCGACGAAGACATTCGCGCCTCGCAGCGGACGTTGGAGCAGGTGCAAAAGGTCGAGGCCCAT CTCAAGCGCAACAAGGAGGAGACTACGCAGATCCAGCACCTCATCGGCTTCCTCAAGGGCGCCCGCAAGATTAGC CCCTCGCTCTCCATCGCGGCCCAGTACGAGCGGCTCCAGCCGCTGAGGACCTGGCTCTTTTGGATGCCGGTGGGA TATCTGCAGACGCAGCACGGCTCGCCCAACTCGCTCGTCATCATCGCCCACCTCTACACGGTGGCCCTGCTCATG GAGCGTCTCTTCCCCGAGATCGGCGCCGCCTACTTTGGCAGCCTCTCCATCTCGCCCGTCGAGGAGATTGCGCGC CGGCTCATGTCCATTAGCGTCGCCGGCGGCCACGACGGACGTGCCCAGCAGCAGACGCCCCTGACGCTGATGGAG TTCCCCATCGACACGGTGCACGAGTTCCGCACGCGCATGGGCTGGGTTCATCCGGAGAGGACGCCGTCGTTCCCG CAGTTCCACCCGCCCAACTTCCCCGTCGGCGATGAGCTGGCGGCGCCCTACGGCAACGTGTCGTTCAGCTACAGC GCCGACGAAATGTCGATGCTCAACAGCGCCTCGATGCCGGGGCTCCCGCAGCCGCCGGTGAGCCCGTCGGTGCTG TCGTCGCCCTACGCGCACCAGCAGTACCTCAGCATCCCTTCGCCGTCGTTCCCGGGGGCCTACAGCCCGGCGTCG TCGACGTTTGAGGGCTCCGTCGCCCACAGCGACTCGGAGGAGTACGGGCCCTTTAGTGCCTACCACCAGCCGTCC GTGTTGAGCGAGGCGCATCGCAGCTTCGGCGTCGGGAACTCGCCCGGCGGCTCGGCCACGACGGCGTCATCGTAT CCGCCCCCGGAGGACTCCGGAGCCCCGTCCCCCTACCTCCACCCAGAGAAGCCCCGGATCCCCGAGTCCCCCGAG CCGCTCCAACTCGGGCGCCACCGCCACTCGGCCTCGGCCTCTTCCTGCTGGCACCCGTCGTCCCCCCTGGCGCGA GCGCCGCTGGTGCCGCCCTCGGACCTGCCCGATAGGAAGGGCAAGAGGCGCGCTGCCTGA |
Gene | >Ophio5|178 ATGCCCATGTCTTGACAATCAGACGGACATTACCGCTTCTCCCTCACCACGCTCGCTTCTCTTCACTTCAACAAA CGGGGAGGAAAAAAGGGAAGGGGATAAAATAAGCCTTGCTGCAAACTCCGGTCCAAGGCAATCCGACCCGACGCA CAGTTTCCGATCGCTACCACGCGCCCCCCCTCCCTCCGAGTCTTGGCCAACTCCATAAGAGCCGGGTCGACTCTT ATACGTCCGACGCCCAACACTCCTCTCCATCTGGCATCGCCACTTCACACCTCTTTCCTCGCTCGCTACCTCTGT TCCCCGACGCCAGGGCTGCCTCGTGTGGTTTTGCTTCCACGTGCGTCTCCCGCCCATGTCTCGCAAGGCTTGTCC TTCTCCCTGCTCACCTACAGTCGTCAACAGGTCTCTCGCTTCCCGTCGGATAATACGACTATGGCGGGTCCCGGT GGCGGTCCTCCTCGCCGCAGGTTCGTCGTCCCTTGTCATCCTCTCCGCCGCCGTCCTCCCTCCGTCTGACGTGCT GTTTGGACCTCCAGTCACACCAAGTCCCGCAAGGGCTGTGAAACCTGGTACGTCGTCGCCCTCGTCGCTCTCCCG AGGACTACCGCCTGACTCGTCACAGCAAGCGTCGCCATATCCGCTGCGATGAAAACTTCCCTCAGTGGTGAGTGT CCTCTGGCCCTCGTCATGGGCTCCTCGGCTCATGCTCCGAACCAGCCGCAACTGCACCAAGCACAAGATTCGCTG TCCGTACAATGACGTCCAGGTTCCTGACGCCGACCGCTCAACCACCCCGGACAAGCCCGACCTCATGTGGACGCC CCAAATCGAGGCTGTCATTGCCGACTGGCAGGCCACCGGTGTCTTCCCCCTCCCGTCTCTCGACGTCTATCCGGC TCCTGTGCCGCAAATGTACTCGGTCGAGGATCTTCGTCTCATCTACCACGTTGCTAGCCTCTACCACGAGCTTGC CTCGATCGATGCCAATAACTTCACCCTGTGGACCCGTCATATCCCAACGTACGTCGAGGCCCCTCCCCCCCCCCC TCCCCCCTTTTCCCCTGCGAGCGCCCGCCGCCTTGTACGACGCGCCCAGCTCCGATCCCGACGTCGTTGTCTCGG CTGACCGGTTCTCCAGCCTGCTGAGGATCGGGGCGACGACCCCCTACGTCATGCATGCACTGCTCGCCTTCTCCG CCATGCACATTGCCTTTCTCACCGACTGCCCCTTGGTCGGCAGCATGGCCTTTGAGCACCGCGGTGTCGCCCTCA GTGGCCTGCACGAGGCCATCGGTTCATTTTCCCGCGACTCCTCGGATGCCATTCTCGCCGCCTCGCTCGTCCTCT CTTGGCAGGCCACAGACTGGTGAGCGCTCGGCCCTCCTCACAAGTTGGCCTGGCATGATGCTGATGAGTTCGATA GGCGCAGCTGGACCCAGCTGATGCAGGGGACCTCGACGGTACGTGACGGCATTACCCTGGCAGCAGTTGCTAGAG GCGGGGAAGACGCAAGAGGCCATCAGCAGAACGGACGTGAGGGAGTCGCTTCCCGCTGACGCTTTCCTCGATAGG TCATCGACGCCATGGATGCCTGGAAGCATGAGTCTCAGTTCGGCGACTTCATTGCCGAGAGTAGCACGTTCCCCA CGGCGCCGCCGTCGCCCGGCCCCGACCACCGGCCGAGCCAGCCGCGCGACGAAGACATTCGCGCCTCGCAGCGGA CGTTGGAGCAGGTGCAAAAGGTCGAGGCCCATCTCAAGCGCAACAAGGAGGAGACTACGCAGATCCAGCACCTCA TCGGCTTCCTCAAGGGCGCCCGCAAGATTAGCCCCTCGCTCTCCATCGCGGCCCAGTACGAGCGGCTCCAGCCGC TGAGGACCTGGCTCTTTTGGATGCCGGTGGGATATCTGCAGACGCAGCACGGCTCGCCCAACTCGCTCGTCATCA TCGCCCACCTCTACACGGTGGCCCTGCTCATGGAGCGTCTCTTCCCCGAGATCGGCGCCGCCTACTTTGGCAGCC TCTCCATCTCGCCCGTCGAGGAGATTGCGCGCCGGCTCATGTCCATTAGCGTCGCCGGCGGCCACGACGGACGTG CCCAGCAGCAGACGCCCCTGACGCTGATGGAGTTCCCCATCGACACGGTGCACGAGTTCCGCACGCGCATGGGCT GGGTTCATCCGGAGAGGACGCCGTCGTTCCCGCAGTTCCACCCGCCCAACTTCCCCGTCGGCGATGAGCTGGCGG CGCCCTACGGCAACGTGTCGTTCAGCTACAGCGCCGACGAAATGTCGATGCTCAACAGCGCCTCGATGCCGGGGC TCCCGCAGCCGCCGGTGAGCCCGTCGGTGCTGTCGTCGCCCTACGCGCACCAGCAGTACCTCAGCATCCCTTCGC CGTCGTTCCCGGGGGCCTACAGCCCGGCGTCGTCGACGTTTGAGGGCTCCGTCGCCCACAGCGACTCGGAGGAGT ACGGGCCCTTTAGTGCCTACCACCAGCCGTCCGTGTTGAGCGAGGCGCATCGCAGCTTCGGCGTCGGGTTCGTCA CTCCCCCACAGCCCGTGTGGATCTAAAAGGCCCCGTAGATGGCGCCCAGAAGACACCGGCGTCTCCGCTCGAGGA AAGTCGCACTCGGATTGACCGTTTTCTGTTCTGACCGTCCAGGAACTCGCCCGGCGGCTCGGCCACGACGGCGTC ATCGTATCCGCCCCCGGAGGACTCCGGAGCCCCGTCCCCCTACCTCCACCCAGAGAAGCCCCGGATCCCCGAGTC CCCCGAGCCGCTCCAACTCGGGCGCCACCGCCACTCGGCCTCGGCCTCTTCCTGCTGGCACCCGTCGTCCCCCCT GGCGCGAGCGCCGCTGGTGCCGCCCTCGGACCTGCCCGATAGGAAGGGCAAGAGGCGCGCTGCCTGA |