Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1768
Gene name
Locationscaffold_167:10707..11434
Strand-
Gene length (bp)727
Transcript length (bp)615
Coding sequence length (bp)612
Protein length (aa) 204

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1768
MKTAIYLLNGLLTVRAVDPFINQMDQPGPTEGIEGQVDQQGAEGATKGAQAEEAQFVQKDDKKGLQPIERRNRWL
KNVDPAWTNLPDDRVYLMSPGVTSRAYPQRSLAVSTLGRGLRKSKRSVVPAGKIADQKMRYKLAEQQDWDEWDRE
LRSKVDPSIYDLIFTDKKEPIKEPIPPEYHDFATRQGRGSAESSADLTDAGQKH
Coding >Ophio5|1768
ATGAAGACGGCTATTTACCTCCTCAACGGCTTACTAACTGTCCGAGCTGTTGATCCATTCATTAATCAAATGGAT
CAGCCCGGTCCCACCGAAGGAATCGAGGGTCAAGTCGATCAACAAGGAGCCGAAGGAGCCACCAAAGGAGCCCAA
GCAGAAGAAGCCCAATTCGTCCAAAAAGACGATAAAAAGGGCCTGCAGCCCATCGAAAGACGAAATCGGTGGCTG
AAGAATGTTGATCCGGCTTGGACTAACCTCCCTGATGATCGTGTCTATCTTATGAGCCCGGGAGTCACATCACGC
GCCTATCCCCAACGCAGCCTAGCTGTCAGCACTTTAGGGCGCGGATTGAGAAAGAGCAAAAGAAGTGTAGTGCCC
GCAGGAAAGATAGCGGACCAGAAGATGCGATACAAGCTGGCGGAACAGCAAGACTGGGACGAGTGGGACAGGGAG
CTGCGCTCGAAGGTCGATCCCTCGATCTATGACCTGATCTTTACCGACAAAAAGGAACCAATAAAAGAGCCGATT
CCGCCGGAGTATCACGACTTTGCGACCAGGCAGGGAAGAGGCTCCGCCGAATCTTCTGCGGACCTTACCGACGCT
GGGCAGAAACAC
Transcript >Ophio5|1768
ATGAAGACGGCTATTTACCTCCTCAACGGCTTACTAACTGTCCGAGCTGTTGATCCATTCATTAATCAAATGGAT
CAGCCCGGTCCCACCGAAGGAATCGAGGGTCAAGTCGATCAACAAGGAGCCGAAGGAGCCACCAAAGGAGCCCAA
GCAGAAGAAGCCCAATTCGTCCAAAAAGACGATAAAAAGGGCCTGCAGCCCATCGAAAGACGAAATCGGTGGCTG
AAGAATGTTGATCCGGCTTGGACTAACCTCCCTGATGATCGTGTCTATCTTATGAGCCCGGGAGTCACATCACGC
GCCTATCCCCAACGCAGCCTAGCTGTCAGCACTTTAGGGCGCGGATTGAGAAAGAGCAAAAGAAGTGTAGTGCCC
GCAGGAAAGATAGCGGACCAGAAGATGCGATACAAGCTGGCGGAACAGCAAGACTGGGACGAGTGGGACAGGGAG
CTGCGCTCGAAGGTCGATCCCTCGATCTATGACCTGATCTTTACCGACAAAAAGGAACCAATAAAAGAGCCGATT
CCGCCGGAGTATCACGACTTTGCGACCAGGCAGGGAAGAGGCTCCGCCGAATCTTCTGCGGACCTTACCGACGCT
GGGCAGAAACACTGA
Gene >Ophio5|1768
ATGAAGACGGCTATTTACCTCCTCAACGGCTTACTAACTGTCCGAGCTGTTGATCCATTCATTAATCAAATGGAT
CAGCCCGGTCCCACCGAAGGAATCGAGGGTCAAGTCGATCAACAAGGAGCCGAAGGAGCCACCAAAGGAGCCCAA
GCAGAAGAAGCCCAATTCGTCCAAAAAGACGATAAAAAGGGCCTGCAGCCCATCGAAAGACGAAATCGGTGGCTG
AAGAATGTTGATCCGGCTTGGACTAACCTCCCTGATGATCGTGTCTATCGTCATCTACGGCACATCAAATACGAA
TAAATGTCAACTAGAAAGTCGACAGTTATGAGCCCGGGAGGTAAAGACACCTGAAACTTCCTAGATTCCGACGAT
TAGAATTGCTACGATTACAACCCAAGTCACATCACGCGCCTATCCCCAACGCAGCCTAGCTGTCAGCACTTTAGG
GCGCGGATTGAGAAAGAGCAAAAGAAGTGTAGTGCCCGCAGGAAAGATAGCGGACCAGAAGATGCGATACAAGCT
GGCGGAACAGCAAGACTGGGACGAGTGGGACAGGGAGCTGCGCTCGAAGGTCGATCCCTCGATCTATGACCTGAT
CTTTACCGACAAAAAGGAACCAATAAAAGAGCCGATTCCGCCGGAGTATCACGACTTTGCGACCAGGCAGGGAAG
AGGCTCCGCCGAATCTTCTGCGGACCTTACCGACGCTGGGCAGAAACACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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