Protein ID | Ophio5|1703 |
Gene name | |
Location | scaffold_163:4195..6087 |
Strand | + |
Gene length (bp) | 1892 |
Transcript length (bp) | 1335 |
Coding sequence length (bp) | 1332 |
Protein length (aa) | 444 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13938|YEP4_SCHPO | UPF0658 Golgi apparatus membrane protein C23H3.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.04 PE=3 SV=3 | 104 | 414 | 1.0E-47 |
sp|Q9UUJ8|YLOA_SCHPO | UPF0658 Golgi apparatus membrane protein C1952.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1952.10c PE=3 SV=1 | 106 | 444 | 8.0E-28 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 109 | 131 | 22 |
2 | 155 | 174 | 19 |
3 | 181 | 203 | 22 |
4 | 235 | 257 | 22 |
5 | 283 | 305 | 22 |
6 | 315 | 334 | 19 |
7 | 341 | 359 | 18 |
8 | 379 | 401 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|1703 MPRKKQKKKRRNHALSPFRLPLSRPACGYFFLIDDDDDNSPLTPGRSRPVARPGYQALLVRPKLKPAYAENANLN AGFDQGYAYRQGFAPSTPARSVYRDRMSFLKSKWPAAFMAVTSLQAIVCLAFESFVFARFQSSLGRWVDKLSVQS QYKTIPTFLTLIIFGFLYELVVVWDALRMKNTIQVIGVCIANLALLVYTAIQVDQIQMAINTLGAEALKPGITPE EVWANVRPFLVAIPAIIALATAAMVFIAWKLYQEFAWDILKNIGADYRMKKRFLHYQIYIALLKFDFFFFLGFII QFVVIVAQKTDPEFALTIATIPITICILLAAAYFTRRENKLGMMAVIILYLGGLIYFIFKLVRIYQPEYRLFYLP VRKSLTAFAVITILLILLTIANAIICMRNFDKGLKAHLLSPRRMDEKPDAHSISLHDVKPQIPSRMTID |
Coding | >Ophio5|1703 ATGCCTAGGAAGAAGCAAAAAAAGAAAAGGCGCAACCACGCCCTTTCACCCTTCCGTCTTCCCCTCTCTCGCCCT GCGTGCGGATACTTCTTCCTCATCGACGACGACGACGACAACTCTCCGTTGACTCCCGGTCGGAGTCGCCCAGTC GCCCGTCCTGGCTACCAGGCCCTCCTCGTTCGACCAAAACTCAAACCCGCCTACGCGGAGAATGCGAATCTAAAC GCTGGCTTCGACCAGGGCTACGCCTATCGCCAAGGCTTCGCCCCTTCCACACCGGCGAGGAGCGTCTATCGCGAC AGGATGAGCTTCCTCAAGTCCAAATGGCCCGCCGCCTTCATGGCTGTCACCAGCCTCCAGGCCATTGTCTGCTTG GCATTCGAGTCATTCGTCTTTGCGCGCTTCCAATCCAGTCTCGGCCGCTGGGTCGATAAGCTTTCCGTCCAGTCC CAATACAAGACGATCCCGACTTTCCTGACCCTCATCATCTTCGGCTTCCTGTATGAACTGGTCGTCGTCTGGGAT GCGTTGCGCATGAAGAACACCATTCAGGTCATTGGCGTCTGCATCGCTAATCTGGCCTTGCTCGTCTACACCGCC ATCCAGGTCGACCAGATCCAGATGGCCATCAACACCCTCGGCGCCGAGGCCCTTAAACCCGGCATCACTCCCGAA GAGGTCTGGGCCAACGTCAGGCCCTTCCTTGTCGCCATCCCGGCCATCATTGCCCTGGCCACCGCCGCCATGGTC TTTATCGCCTGGAAGCTCTACCAGGAGTTCGCCTGGGATATCCTCAAAAACATTGGCGCTGACTATCGCATGAAG AAGCGTTTCCTCCATTACCAGATTTACATCGCACTGCTCAAGTTCGACTTCTTCTTCTTCCTCGGCTTCATCATC CAGTTCGTCGTCATCGTCGCCCAAAAGACGGATCCCGAGTTCGCCCTGACCATCGCCACCATCCCCATCACCATC TGCATTCTCCTCGCCGCTGCCTACTTCACCCGCCGCGAGAATAAGCTGGGCATGATGGCTGTCATAATCCTCTAC CTGGGCGGACTCATATACTTCATCTTCAAGCTCGTCCGCATCTACCAGCCCGAATACAGGCTCTTCTACTTGCCC GTGCGCAAATCTCTCACCGCCTTCGCCGTCATCACCATCCTATTGATTCTACTCACCATTGCAAACGCCATCATC TGCATGCGCAACTTCGACAAGGGCCTCAAGGCCCACTTGCTGTCCCCGCGCCGAATGGACGAGAAGCCCGACGCT CATTCCATCAGCCTGCACGACGTCAAGCCGCAAATTCCCAGTCGGATGACCATCGAC |
Transcript | >Ophio5|1703 ATGCCTAGGAAGAAGCAAAAAAAGAAAAGGCGCAACCACGCCCTTTCACCCTTCCGTCTTCCCCTCTCTCGCCCT GCGTGCGGATACTTCTTCCTCATCGACGACGACGACGACAACTCTCCGTTGACTCCCGGTCGGAGTCGCCCAGTC GCCCGTCCTGGCTACCAGGCCCTCCTCGTTCGACCAAAACTCAAACCCGCCTACGCGGAGAATGCGAATCTAAAC GCTGGCTTCGACCAGGGCTACGCCTATCGCCAAGGCTTCGCCCCTTCCACACCGGCGAGGAGCGTCTATCGCGAC AGGATGAGCTTCCTCAAGTCCAAATGGCCCGCCGCCTTCATGGCTGTCACCAGCCTCCAGGCCATTGTCTGCTTG GCATTCGAGTCATTCGTCTTTGCGCGCTTCCAATCCAGTCTCGGCCGCTGGGTCGATAAGCTTTCCGTCCAGTCC CAATACAAGACGATCCCGACTTTCCTGACCCTCATCATCTTCGGCTTCCTGTATGAACTGGTCGTCGTCTGGGAT GCGTTGCGCATGAAGAACACCATTCAGGTCATTGGCGTCTGCATCGCTAATCTGGCCTTGCTCGTCTACACCGCC ATCCAGGTCGACCAGATCCAGATGGCCATCAACACCCTCGGCGCCGAGGCCCTTAAACCCGGCATCACTCCCGAA GAGGTCTGGGCCAACGTCAGGCCCTTCCTTGTCGCCATCCCGGCCATCATTGCCCTGGCCACCGCCGCCATGGTC TTTATCGCCTGGAAGCTCTACCAGGAGTTCGCCTGGGATATCCTCAAAAACATTGGCGCTGACTATCGCATGAAG AAGCGTTTCCTCCATTACCAGATTTACATCGCACTGCTCAAGTTCGACTTCTTCTTCTTCCTCGGCTTCATCATC CAGTTCGTCGTCATCGTCGCCCAAAAGACGGATCCCGAGTTCGCCCTGACCATCGCCACCATCCCCATCACCATC TGCATTCTCCTCGCCGCTGCCTACTTCACCCGCCGCGAGAATAAGCTGGGCATGATGGCTGTCATAATCCTCTAC CTGGGCGGACTCATATACTTCATCTTCAAGCTCGTCCGCATCTACCAGCCCGAATACAGGCTCTTCTACTTGCCC GTGCGCAAATCTCTCACCGCCTTCGCCGTCATCACCATCCTATTGATTCTACTCACCATTGCAAACGCCATCATC TGCATGCGCAACTTCGACAAGGGCCTCAAGGCCCACTTGCTGTCCCCGCGCCGAATGGACGAGAAGCCCGACGCT CATTCCATCAGCCTGCACGACGTCAAGCCGCAAATTCCCAGTCGGATGACCATCGACTGA |
Gene | >Ophio5|1703 ATGCCTAGGGTTTAGATACGTTACCTCGCACCGTGCTCCGTACAACATCATCACGCGCCCGTTCCGCTTCTCCTG AGCCACCCCTTCTCTAGTCCTCCTCCTCCGCTTCCTATTCCTATACTCACCATCTCCTTTCACCTTTGCTTCACC TTGATCCCTCTCCTCATCCGACCTCTTCCTCCAGTCTCTCGTTCAGTAGCAGCCTCGGCATTTACCGTTCCTCTA ATTCCTCCCTGCCTTCGCGCCGCGTCTTCGCCACCGAGCCATCATCAACAGGAGAAAGCAGACCGTCCCTAAAAA TAAACCAGCACCAAAGAAGAAGCAAAAAAAGAAAAGGCGCAACCACGCCCTTTCACCCTTCCGTCTTCCCCTCTC TCGCCCTGCGTGCGGATACTTCTTCCTCATCGACGACGACGACGACAACTCTCCGTTGACTCCCGGTCGGAGTCG CCCAGTCGCCCGTCCTGGCTACCAGGTTAGAGACTTGAGCCACCCCTCCCCTCTCCCTCTCCTTCGCCCAGCCGC CAATCAATTGCTCACATCTCAGCGCTCGTCACAGGCCCTCCTCGTTCGACCAAAACTCAAAGTACTCGCGCGAAT TCGGCCAGGCTTATCCTCAGCCCGCATACTCACAGCCCGCCTACGCGGAGAATGCGAATCTAAACGCTGGCTTCG ACCAGGGCTACGCCTATCGCCAAGGCTTCGCCCCTTCCACACCGGCGAGGAGCGTCTATCGCGACAGGATGAGCT TCCTCAAGTCCAAATGGCCCGCCGCCTTCATGGCTGTCACCAGCCTCCAGGCCATTGTCTGCTTGGCATTCGAGT CGTACGTCCCGCCGCCGCCGCATTCGACGCCCGCTTACCATTTGTCCCCTCTTAGATTCGTCTTTGCGCGCTTCC AATCCAGTCTCGGCCGCTGGGTCGATAAGCTTTCCGTCCAGTCCCAATACAAGACGATCCCGACTTTCCTGACCC TCATCATCTTCGGCTTCCTGTATGAACTGGTCGTCGTCTGGGATGCGTTGCGCATGAAGAACACCATTCAGGTCA TTGGCGTCTGCATCGCTAATCTGGCCTTGCTCGTCTACACCGCCATCCAGGTCGACCAGATCCAGATGGCCATCA ACACCCTCGGCGCCGAGGCCCTTAAACCCGGCATCACTCCCGAAGAGGTCTGGGCCAACGTCAGGCCCTTCCTTG TCGCCATCCCGGCCATCATTGCCCTGGCCACCGCCGCCATGGTCTTTATCGCCTGGAAGCTCTACCAGGAGTTCG CCTGGGATATCCTCAAAAACATTGGCGCTGACTATCGCATGAAGAAGCGTTTCCTCCATTACCAGGTCCGTGGCA CATACGAGCGCCTGTCGCTGCCAAGACGCTAATATCTCCTCCCCCCCTTTCAGATTTACATCGCACTGCTCAAGT TCGACTTCTTCTTCTTCCTCGGCTTCATCATCCAGTTCGTCGTCATCGTCGCCCAAAAGACGGATCCCGAGTTCG CCCTGACCATCGCCACCATCCCCATCACCATCTGCATTCTCCTCGCCGCTGCCTACTTCACCCGCCGCGAGAATA AGCTGGGCATGATGGCTGTCATAATCCTCTACCTGGGCGGACTCATATACTTCATCTTCAAGCTCGTCCGCATCT ACCAGCCCGAATACAGGCTCTTCTACTTGCCCGTGCGCAAATCTCTCACCGCCTTCGCCGTCATCACCATCCTAT TGATTCTACTCACCATTGCAAACGCCATCATCTGCATGCGCAACTTCGACAAGGGCCTCAAGGCCCACTTGCTGT CCCCGCGCCGAATGGACGAGAAGCCCGACGCTCATTCCATCAGCCTGCACGACGTCAAGCCGCAAATTCCCAGTC GGATGACCATCGACTGA |