Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1695
Gene name
Locationscaffold_162:31150..32227
Strand-
Gene length (bp)1077
Transcript length (bp)957
Coding sequence length (bp)954
Protein length (aa) 318

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1695
MKAAVVAVAVVAVAEAARLPRTCPDPEKSACKNFCLSGDAAFNTDKVSCTLVKDGGKDATLCASNDSFNFEVKYP
CVLPPTLRACPGEEKGACKDFCLSGDAAFNSDKVTCTLVKDGGRDATLCASNDMFGFEVKYPCRKQDATAAAPKK
DVPVGTRPAVGPLKGQDAAPAAVPNHPTKTQSAKQSIATTKAPSSVETKVFEAATMTAKRGPDTSAKTRSPGDHV
ATKTTSSEDIPPPAPRPKDKVPYKGDEPSNQASSGNGTAATMPVPCGGTAAAADAAANAAADAAKDMNELKYLTC
WDPPFATAASEPGSPQLS
Coding >Ophio5|1695
ATGAAGGCCGCCGTCGTTGCCGTGGCCGTTGTGGCCGTGGCCGAAGCCGCTCGCCTGCCTCGCACCTGTCCGGAT
CCGGAGAAGTCGGCGTGCAAGAATTTCTGCCTCTCGGGGGATGCGGCGTTCAACACGGACAAGGTGTCGTGTACT
CTGGTCAAGGACGGGGGCAAGGATGCAACTCTATGTGCCTCCAACGATAGCTTCAACTTTGAGGTCAAGTATCCT
TGCGTTTTGCCCCCGACGCTCCGCGCTTGCCCGGGGGAGGAGAAAGGGGCGTGCAAGGATTTCTGCCTTTCGGGC
GATGCTGCCTTTAATTCGGACAAGGTGACGTGCACGCTTGTCAAGGACGGAGGCAGGGATGCGACGCTTTGCGCT
TCCAACGACATGTTCGGGTTTGAGGTCAAGTATCCTTGTCGGAAGCAAGATGCCACCGCGGCGGCCCCGAAGAAG
GATGTCCCAGTGGGTACCAGGCCAGCTGTAGGCCCTCTGAAAGGCCAAGATGCCGCTCCGGCCGCAGTGCCGAAT
CACCCTACCAAGACTCAGTCTGCCAAGCAGTCGATTGCCACGACCAAAGCACCATCCTCCGTCGAGACCAAGGTA
TTCGAGGCAGCCACCATGACGGCCAAAAGGGGACCAGATACCAGTGCAAAGACTCGGTCTCCCGGGGATCATGTT
GCCACCAAAACGACTTCGTCTGAAGACATTCCTCCTCCGGCTCCACGCCCGAAGGACAAGGTCCCATACAAGGGA
GATGAGCCGAGCAACCAGGCTTCCAGTGGAAATGGTACCGCTGCGACGATGCCGGTGCCTTGTGGTGGAACTGCT
GCTGCTGCTGATGCGGCTGCTAATGCGGCTGCTGATGCTGCTAAGGACATGAACGAGCTGAAGTATCTAACCTGT
TGGGATCCTCCGTTTGCGACTGCAGCGTCCGAGCCAGGGTCACCGCAGCTTTCA
Transcript >Ophio5|1695
ATGAAGGCCGCCGTCGTTGCCGTGGCCGTTGTGGCCGTGGCCGAAGCCGCTCGCCTGCCTCGCACCTGTCCGGAT
CCGGAGAAGTCGGCGTGCAAGAATTTCTGCCTCTCGGGGGATGCGGCGTTCAACACGGACAAGGTGTCGTGTACT
CTGGTCAAGGACGGGGGCAAGGATGCAACTCTATGTGCCTCCAACGATAGCTTCAACTTTGAGGTCAAGTATCCT
TGCGTTTTGCCCCCGACGCTCCGCGCTTGCCCGGGGGAGGAGAAAGGGGCGTGCAAGGATTTCTGCCTTTCGGGC
GATGCTGCCTTTAATTCGGACAAGGTGACGTGCACGCTTGTCAAGGACGGAGGCAGGGATGCGACGCTTTGCGCT
TCCAACGACATGTTCGGGTTTGAGGTCAAGTATCCTTGTCGGAAGCAAGATGCCACCGCGGCGGCCCCGAAGAAG
GATGTCCCAGTGGGTACCAGGCCAGCTGTAGGCCCTCTGAAAGGCCAAGATGCCGCTCCGGCCGCAGTGCCGAAT
CACCCTACCAAGACTCAGTCTGCCAAGCAGTCGATTGCCACGACCAAAGCACCATCCTCCGTCGAGACCAAGGTA
TTCGAGGCAGCCACCATGACGGCCAAAAGGGGACCAGATACCAGTGCAAAGACTCGGTCTCCCGGGGATCATGTT
GCCACCAAAACGACTTCGTCTGAAGACATTCCTCCTCCGGCTCCACGCCCGAAGGACAAGGTCCCATACAAGGGA
GATGAGCCGAGCAACCAGGCTTCCAGTGGAAATGGTACCGCTGCGACGATGCCGGTGCCTTGTGGTGGAACTGCT
GCTGCTGCTGATGCGGCTGCTAATGCGGCTGCTGATGCTGCTAAGGACATGAACGAGCTGAAGTATCTAACCTGT
TGGGATCCTCCGTTTGCGACTGCAGCGTCCGAGCCAGGGTCACCGCAGCTTTCATGA
Gene >Ophio5|1695
ATGAAGGCCGCCGTCGTTGCCGTGGCCGTTGTGGCCGTGGCCGAAGCCGCTCGCCTGCCTCGCACCTGTCCGGAT
CCGGAGAAGTCGGCGTGCAAGAATTTCTGCCTCTCGGGGGATGCGGCGTTCAACACGGACAAGGTGTCGTGTACT
CTGGTCAAGGACGGGGGCAAGGATGCAACTCTATGTGCCTCCAACGATAGCTTCAACTTTGAGGTGAGTGACGCT
GGACTCGGTCTGCCAAACAGGATGCTGACAGTGAGGGAATCGTCTAGGTCAAGTATCCTTGCGTTTTGCCCCCGA
CGCTCCGCGCTTGCCCGGGGGAGGAGAAAGGGGCGTGCAAGGATTTCTGCCTTTCGGGCGATGCTGCCTTTAATT
CGGACAAGGTGACGTGCACGCTTGTCAAGGACGGAGGCAGGGATGCGACGCTTTGCGCTTCCAACGACATGTTCG
GGTTTGAGGTGGGTGACGCCAGAGTGCAACCCGCGAAGACGGGGACGCTGACTCGAGGGAATCGTCTAGGTCAAG
TATCCTTGTCGGAAGCAAGATGCCACCGCGGCGGCCCCGAAGAAGGATGTCCCAGTGGGTACCAGGCCAGCTGTA
GGCCCTCTGAAAGGCCAAGATGCCGCTCCGGCCGCAGTGCCGAATCACCCTACCAAGACTCAGTCTGCCAAGCAG
TCGATTGCCACGACCAAAGCACCATCCTCCGTCGAGACCAAGGTATTCGAGGCAGCCACCATGACGGCCAAAAGG
GGACCAGATACCAGTGCAAAGACTCGGTCTCCCGGGGATCATGTTGCCACCAAAACGACTTCGTCTGAAGACATT
CCTCCTCCGGCTCCACGCCCGAAGGACAAGGTCCCATACAAGGGAGATGAGCCGAGCAACCAGGCTTCCAGTGGA
AATGGTACCGCTGCGACGATGCCGGTGCCTTGTGGTGGAACTGCTGCTGCTGCTGATGCGGCTGCTAATGCGGCT
GCTGATGCTGCTAAGGACATGAACGAGCTGAAGTATCTAACCTGTTGGGATCCTCCGTTTGCGACTGCAGCGTCC
GAGCCAGGGTCACCGCAGCTTTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail