© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|1675 |
| Gene name | |
| Location | scaffold_161:12036..12492 |
| Strand | + |
| Gene length (bp) | 456 |
| Transcript length (bp) | 276 |
| Coding sequence length (bp) | 273 |
| Protein length (aa) | 91 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1107 | 0.1273 | 0.9286 | 0.0331 | 0.0729 | 0.0175 | 0.0534 | 0.0605 | 0.0432 | 0.0045 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 45 | 0.997147 |
| Orthofinder run ID | 4 |
| Orthogroup | 7429 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|06345 |
| Ophiocordyceps kimflemingae | Ophio5|1675 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1675 MALQKEASLAPSSITTPPKRIMMKFLLLASLLSTAAALPAQQANAIDASRAFTCPSRVQAFCRASNVHSGCTFNG NFRSDAMETCKQCRCG |
| Coding | >Ophio5|1675 ATGGCGTTGCAAAAGGAAGCATCCCTTGCGCCGAGCTCGATTACTACGCCGCCCAAAAGAATCATGATGAAGTTC CTCCTCCTCGCCTCTCTCCTCAGCACCGCCGCGGCGCTGCCCGCCCAACAGGCCAACGCCATCGACGCCAGTAGG GCATTCACCTGTCCATCTCGTGTGCAGGCTTTTTGCCGCGCGTCAAATGTGCATTCGGGTTGCACGTTCAACGGA AACTTCCGCTCCGATGCAATGGAGACGTGCAAGCAGTGTCGTTGTGGC |
| Transcript | >Ophio5|1675 ATGGCGTTGCAAAAGGAAGCATCCCTTGCGCCGAGCTCGATTACTACGCCGCCCAAAAGAATCATGATGAAGTTC CTCCTCCTCGCCTCTCTCCTCAGCACCGCCGCGGCGCTGCCCGCCCAACAGGCCAACGCCATCGACGCCAGTAGG GCATTCACCTGTCCATCTCGTGTGCAGGCTTTTTGCCGCGCGTCAAATGTGCATTCGGGTTGCACGTTCAACGGA AACTTCCGCTCCGATGCAATGGAGACGTGCAAGCAGTGTCGTTGTGGCTAG |
| Gene | >Ophio5|1675 ATGGCGTTGCAAAAGGAAGCATCCCTTGCGCCGAGCTGTATATAACTTCCTGTCCCCTTTGCATCAACACGCTCA TGTCCATCACTTCAGCGATTACTACGCCGCCCAAAAGAATCATGATGAAGGTGCGTTTTTTCTTTTCACGCACAA GCAGCCTTAATCACCAACCAGCTAAGCATTTGTCTCTTTAGTTCCTCCTCCTCGCCTCTCTCCTCAGCACCGCCG CGGCGCTGCCCGCCCAACAGGCCAACGCCATCGACGCCAGTAGGGCATTCACCTGTCCATCTCGTGTGCAGGCTT TTTGCCGCGCGTCAAATGTGCATTCGGGTTGCACGTTCAACGGAAACTTCCGCTCCGATGCAATGGAGACGTGCA AGCAGTGTCGTTGTGGTGAGTCATTTGGCTGCTGGCCCTTGTGCTGAGTGAGGGAGGAACTGACGATGAGGACCA GGCTAG |