© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|1644 |
| Gene name | |
| Location | scaffold_16:73996..75694 |
| Strand | - |
| Gene length (bp) | 1698 |
| Transcript length (bp) | 1524 |
| Coding sequence length (bp) | 1521 |
| Protein length (aa) | 507 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.2E-19 | 101 | 452 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 53 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 131 | 153 | 22 |
| 2 | 163 | 185 | 22 |
| 3 | 198 | 220 | 22 |
| 4 | 225 | 244 | 19 |
| 5 | 292 | 314 | 22 |
| 6 | 344 | 366 | 22 |
| 7 | 378 | 400 | 22 |
| 8 | 404 | 426 | 22 |
| 9 | 438 | 460 | 22 |
| 10 | 470 | 492 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 0.0 | 0.0 | 0.00 |
| CcL | In ants, during behavior modification | 0.2 | 0.0 | 0.55 |
| CcD | In ants, recently dead | 0.0 | 0.0 | 0.00 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 1.0 | no |
| SC16a | CcD | 1.0 | no |
| CcL | CcD | 1.0 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1644 MATFPPINDDEFQEETPLLSTNARPSVSSSVSLRRRVIATCALFLFIVEVSSFVMEPSTLQIVEDIICRNHYPDH KLGMPIVDRRCKDTSVQKTLAMIRSWSMSADMLIRPALVVQFPFGIMADKYGRRTVLILAFVGCVLQTSWVILVL QLPDIFSVWSLLYGSAAYAIGGGGQMAGAMIWTIVTDVTPVANRTTVFYQLQAFYLLLAVLSNSLAAFLLSIDPW IGMWLGFGTLLLSVSAACLIPETLHLRHQVDTRHDSPQENGVGENLTTDKGSCISQAWAAVRHDAGHVWRFIFAS RSIVTLILAYGLFIPSKLGIKLNILQYMTRRFGWEWSTATYISTVSNITSVVVLLVILPSISAILVRRRTYNPLE RDLLLSRVSSALVVVGGFMLAFAAVRWLFISSLVIISLGVGFGVLCRALLNTLVEPHTVATVNTTISMVETVVSL AGAPALGWLLSCGLEAGGPWLGLSFLVSAGFCTLAYLAISIYRVPAGTPDTRETPTR |
| Coding | >Ophio5|1644 ATGGCGACTTTCCCCCCTATCAACGACGACGAGTTTCAAGAGGAGACGCCTCTTCTCAGCACAAATGCGCGGCCC AGCGTAAGCTCCAGTGTGTCGCTTCGGCGCCGCGTCATCGCCACCTGCGCCCTGTTCCTCTTCATCGTTGAGGTG AGCAGCTTCGTCATGGAGCCGTCGACGCTGCAGATTGTGGAGGACATCATTTGCCGAAACCATTATCCGGACCAC AAGCTGGGCATGCCGATTGTCGACAGACGCTGCAAAGACACGAGCGTTCAGAAGACACTGGCCATGATTCGATCT TGGTCCATGTCGGCCGACATGCTCATCCGCCCAGCCCTCGTTGTTCAGTTTCCCTTTGGCATCATGGCCGACAAG TACGGCCGTCGGACGGTCTTGATATTGGCCTTTGTTGGATGCGTCCTGCAGACATCCTGGGTCATCTTGGTCTTG CAGCTGCCCGACATCTTCTCCGTCTGGAGCTTATTGTACGGCAGCGCCGCATATGCCATAGGCGGAGGAGGCCAA ATGGCCGGTGCCATGATTTGGACCATTGTGACGGATGTTACCCCCGTCGCCAACCGCACAACCGTCTTCTACCAG CTTCAAGCCTTTTATCTGCTTCTCGCCGTACTTTCCAACTCATTGGCCGCCTTCCTCCTCAGCATCGACCCCTGG ATCGGCATGTGGCTTGGATTCGGCACCCTCCTCCTCAGCGTGTCAGCCGCCTGTCTGATTCCAGAAACTCTGCAC CTGCGCCACCAAGTCGACACACGACATGACTCTCCACAAGAGAATGGTGTAGGGGAGAACCTGACGACGGACAAA GGAAGTTGCATCTCGCAAGCTTGGGCAGCCGTCAGACATGATGCTGGTCATGTTTGGCGCTTCATCTTTGCTTCG AGGAGCATCGTCACTCTCATACTGGCCTATGGCCTTTTCATCCCGTCCAAACTCGGCATAAAACTGAACATTCTC CAATACATGACGAGACGATTCGGATGGGAGTGGTCAACGGCCACCTACATCTCTACAGTCAGCAACATAACCTCT GTCGTTGTGCTGCTGGTGATATTACCTTCCATCTCTGCCATACTTGTCAGGCGTCGCACCTACAACCCTCTGGAG CGGGACCTTTTGCTGAGCCGCGTGTCCTCGGCACTCGTCGTCGTGGGCGGCTTCATGCTAGCCTTTGCCGCTGTG CGATGGTTGTTCATCTCATCTCTCGTCATCATCAGCCTCGGAGTAGGCTTCGGTGTGCTGTGCCGCGCCTTGCTC AACACCCTCGTCGAACCGCACACAGTTGCAACCGTCAACACCACGATATCCATGGTGGAAACGGTCGTGAGTCTC GCTGGAGCCCCGGCGCTAGGTTGGCTTCTCAGCTGCGGGTTAGAAGCTGGCGGTCCTTGGCTCGGACTTTCGTTC CTCGTGTCCGCTGGCTTTTGCACCCTGGCGTATCTTGCCATTTCCATTTATAGGGTTCCTGCTGGGACGCCTGAT ACAAGGGAGACGCCCACAAGA |
| Transcript | >Ophio5|1644 ATGGCGACTTTCCCCCCTATCAACGACGACGAGTTTCAAGAGGAGACGCCTCTTCTCAGCACAAATGCGCGGCCC AGCGTAAGCTCCAGTGTGTCGCTTCGGCGCCGCGTCATCGCCACCTGCGCCCTGTTCCTCTTCATCGTTGAGGTG AGCAGCTTCGTCATGGAGCCGTCGACGCTGCAGATTGTGGAGGACATCATTTGCCGAAACCATTATCCGGACCAC AAGCTGGGCATGCCGATTGTCGACAGACGCTGCAAAGACACGAGCGTTCAGAAGACACTGGCCATGATTCGATCT TGGTCCATGTCGGCCGACATGCTCATCCGCCCAGCCCTCGTTGTTCAGTTTCCCTTTGGCATCATGGCCGACAAG TACGGCCGTCGGACGGTCTTGATATTGGCCTTTGTTGGATGCGTCCTGCAGACATCCTGGGTCATCTTGGTCTTG CAGCTGCCCGACATCTTCTCCGTCTGGAGCTTATTGTACGGCAGCGCCGCATATGCCATAGGCGGAGGAGGCCAA ATGGCCGGTGCCATGATTTGGACCATTGTGACGGATGTTACCCCCGTCGCCAACCGCACAACCGTCTTCTACCAG CTTCAAGCCTTTTATCTGCTTCTCGCCGTACTTTCCAACTCATTGGCCGCCTTCCTCCTCAGCATCGACCCCTGG ATCGGCATGTGGCTTGGATTCGGCACCCTCCTCCTCAGCGTGTCAGCCGCCTGTCTGATTCCAGAAACTCTGCAC CTGCGCCACCAAGTCGACACACGACATGACTCTCCACAAGAGAATGGTGTAGGGGAGAACCTGACGACGGACAAA GGAAGTTGCATCTCGCAAGCTTGGGCAGCCGTCAGACATGATGCTGGTCATGTTTGGCGCTTCATCTTTGCTTCG AGGAGCATCGTCACTCTCATACTGGCCTATGGCCTTTTCATCCCGTCCAAACTCGGCATAAAACTGAACATTCTC CAATACATGACGAGACGATTCGGATGGGAGTGGTCAACGGCCACCTACATCTCTACAGTCAGCAACATAACCTCT GTCGTTGTGCTGCTGGTGATATTACCTTCCATCTCTGCCATACTTGTCAGGCGTCGCACCTACAACCCTCTGGAG CGGGACCTTTTGCTGAGCCGCGTGTCCTCGGCACTCGTCGTCGTGGGCGGCTTCATGCTAGCCTTTGCCGCTGTG CGATGGTTGTTCATCTCATCTCTCGTCATCATCAGCCTCGGAGTAGGCTTCGGTGTGCTGTGCCGCGCCTTGCTC AACACCCTCGTCGAACCGCACACAGTTGCAACCGTCAACACCACGATATCCATGGTGGAAACGGTCGTGAGTCTC GCTGGAGCCCCGGCGCTAGGTTGGCTTCTCAGCTGCGGGTTAGAAGCTGGCGGTCCTTGGCTCGGACTTTCGTTC CTCGTGTCCGCTGGCTTTTGCACCCTGGCGTATCTTGCCATTTCCATTTATAGGGTTCCTGCTGGGACGCCTGAT ACAAGGGAGACGCCCACAAGATAA |
| Gene | >Ophio5|1644 ATGGCGACTTTCCCCCCTATCAACGACGACGAGTTTCAAGAGGAGACGCCTCTTCTCAGCACAAATGCGCGGCCC AGCGTAAGCTCCAGTGTGTCGCTTCGGCGCCGCGTCATCGCCACCTGCGCCCTGTTCCTCTTCATCGTTGAGGTG AGCAGCTTCGTCATGGAGCCGTCGACGCTGCAGATTGTGGAGGACATCATTTGCCGAAACCATTATCCGGACCAC AAGCTGGGCATGCCGATTGTCGACAGACGCTGCAAAGACACGAGCGTTCAGAAGACACTGGCCATGATTCGATCT TGGTCCATGTCGGCCGACATGCTCATCCGTACGTCGAGCCTCTGATGGCGGAAATCTTGCCTGTCGTTGACTTCA GGCCCAGCCCTCGTTGTTCAGTTTCCCTTTGGCATCATGGCCGACAAGTACGGCCGTCGGACGGTCTTGATATTG GCCTTTGTTGGATGCGTCCTGCAGACATCCTGGGTCATCTTGGTCTGTGAGTATAGGCAGCCATCGACGACTTCT CTGACCTGACTTGAACGCCTCGACTAGTGCAGCTGCCCGACATCTTCTCCGTCTGGAGCTTATTGTACGGCAGCG CCGCATATGCCATAGGCGGAGGAGGCCAAATGGCCGGTGCCATGATTTGGACCATTGTGACGGATGTTACCCCCG TCGCCAACCGCACAACCGTCTTCTACCAGCTTCAAGCCTTTTATCTGCTTCTCGCCGTACTTTCCAACTCATTGG CCGCCTTCCTCCTCAGCATCGACCCCTGGATCGGCATGTGGCTTGGATTCGGCACCCTCCTCCTCAGCGTGTCAG CCGCCTGTCTGATTCCAGAAACTCTGCACCTGCGCCACCAAGTCGACACACGACATGACTCTCCACAAGAGAATG GTGTAGGGGAGAACCTGACGACGGACAAAGGAAGTTGCATCTCGCAAGCTTGGGCAGCCGTCAGACATGATGCTG GTCATGTTTGGCGCTTCATCTTTGCTTCGAGGAGCATCGTCACTCTCATACTGGCCTATGGCCTTTTCATCCCGT CCAAACTCGGCATAAAACTGAACATTCTCCAATACATGACGAGACGATTCGGATGGGAGTGGTCAACGGTCAGGC TCCCCTGTTCAATCCAAGATGGAAACCCCCTTCTTTATAGCGGCATGTGCTCACGCTTTTCAGGCCACCTACATC TCTACAGTCAGCAACATAACCTCTGTCGTTGTGCTGCTGGTGATATTACCTTCCATCTCTGCCATACTTGTCAGG CGTCGCACCTACAACCCTCTGGAGCGGGACCTTTTGCTGAGCCGCGTGTCCTCGGCACTCGTCGTCGTGGGCGGC TTCATGCTAGCCTTTGCCGCTGTGCGATGGTTGTTCATCTCATCTCTCGTCATCATCAGCCTCGGAGTAGGCTTC GGTGTGCTGTGCCGCGCCTTGCTCAACACCCTCGTCGAACCGCACACAGTTGCAACCGTCAACACCACGATATCC ATGGTGGAAACGGTCGTGAGTCTCGCTGGAGCCCCGGCGCTAGGTTGGCTTCTCAGCTGCGGGTTAGAAGCTGGC GGTCCTTGGCTCGGACTTTCGTTCCTCGTGTCCGCTGGCTTTTGCACCCTGGCGTATCTTGCCATTTCCATTTAT AGGGTTCCTGCTGGGACGCCTGATACAAGGGAGACGCCCACAAGATAA |