Protein ID | Ophio5|1643 |
Gene name | |
Location | scaffold_16:71359..73578 |
Strand | + |
Gene length (bp) | 2219 |
Transcript length (bp) | 1809 |
Coding sequence length (bp) | 1806 |
Protein length (aa) | 602 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 42 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 78 | 100 | 22 |
2 | 158 | 180 | 22 |
3 | 190 | 212 | 22 |
4 | 225 | 247 | 22 |
5 | 257 | 279 | 22 |
6 | 472 | 494 | 22 |
7 | 504 | 526 | 22 |
8 | 531 | 553 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|1643 MAEYELKELPADKLRLFKSPIIHNRNEQPRRGDDSPEDQGDSQLPSFLQVFYDLVFAANYNVFSDTQEVTDSSRF KAYLGYFNLLWLTWLLVTLFDVRYVTDSIFTRLTRAIHLGVLVGFTVVAPKFNPGAQHLETMQAMFEYGAVLHHI RDFKKARFPIYLQIALHIGAAIIYFGLTFGFRPGERSHDFVVWYITSAAEAMVTILLSNLYPVLSFTDTHLIKRL TLLTVIIIGDGIIQVAREVVTIVKNPDAWDGVTIGLVTAAVATIYFVFLLYFDWLRDSFHLPAIRQQLWMGVHLP FHLSLILFTQGFTQFLIWSKIMDVLNTLSMGFGRAGHEWLLNATSQDVQARLNDSTQAFFMMFPPKIPSTWVTID DAISNVTLIPDIFWTELANYYETHDASVFNATDIEAAEVFSDVLQATMSSMANALFATFGMDLESEVTNKNPRLH DDIRGGGFQGEVQYETWDRYRLVFACTYIAAGSTLLSMIALAILARTTPIKTWPIIRLVIIACLALGLGLTSILF FNQSRVFTFLLSPWVLPTIALVWTATIILTHVNGENVGRRVRHFRRRRFSAYNVNPSLPTPDILASDGRWHKMKD EA |
Coding | >Ophio5|1643 ATGGCGGAATACGAACTCAAGGAGCTGCCGGCTGACAAGTTGCGGCTCTTCAAGAGCCCCATCATCCACAACCGT AATGAACAACCTAGGCGGGGAGACGACAGCCCCGAGGACCAGGGTGATAGTCAACTGCCCAGCTTTCTTCAGGTC TTTTACGATCTCGTCTTCGCGGCCAACTACAATGTCTTCTCTGACACCCAAGAAGTCACCGACTCGTCTAGGTTC AAGGCCTATCTAGGCTACTTCAACCTCTTATGGTTGACATGGCTCCTCGTCACCCTCTTCGACGTCCGATATGTC ACCGACAGCATCTTCACCCGCCTCACGAGGGCCATCCACCTCGGCGTCCTCGTCGGCTTCACTGTCGTCGCCCCA AAGTTTAACCCGGGGGCGCAGCATTTGGAAACAATGCAAGCCATGTTTGAGTACGGCGCAGTGCTGCATCACATC CGAGACTTCAAAAAGGCACGATTCCCTATATATCTACAGATTGCCCTTCACATTGGGGCCGCAATCATCTACTTT GGTCTTACTTTTGGCTTCCGCCCCGGGGAGAGGAGCCACGACTTTGTGGTGTGGTATATCACATCGGCGGCCGAG GCCATGGTCACCATTCTCCTATCCAACCTCTATCCAGTTCTCAGCTTCACCGATACCCATCTCATCAAGCGGTTG ACGCTCCTGACTGTCATCATCATTGGCGATGGCATCATTCAGGTGGCAAGGGAGGTTGTGACCATTGTCAAGAAT CCAGATGCCTGGGACGGTGTCACGATTGGGCTTGTCACGGCCGCCGTCGCCACCATATACTTTGTTTTCCTCCTC TATTTCGACTGGCTTCGAGACTCGTTCCACCTCCCGGCCATTCGACAGCAGTTGTGGATGGGCGTTCACCTGCCC TTTCACCTGTCCCTCATTCTTTTCACTCAGGGCTTCACGCAATTCCTCATCTGGTCCAAGATCATGGACGTTCTC AACACCCTGAGCATGGGCTTCGGCCGCGCAGGCCATGAATGGCTGCTGAATGCCACGAGCCAAGACGTCCAGGCC CGGCTCAACGATAGCACTCAGGCCTTCTTCATGATGTTCCCGCCCAAGATTCCCAGCACCTGGGTGACCATCGAC GATGCCATCTCCAATGTCACCCTGATTCCCGACATCTTCTGGACCGAGCTCGCCAACTACTACGAAACCCACGAT GCTTCCGTCTTCAACGCGACCGACATCGAGGCCGCAGAAGTCTTTTCCGACGTACTCCAAGCCACCATGTCGTCC ATGGCCAATGCGCTGTTTGCCACCTTTGGCATGGATCTCGAGAGCGAGGTGACCAACAAGAATCCCCGGCTCCAC GACGATATCAGGGGAGGGGGTTTCCAGGGAGAGGTCCAGTATGAGACGTGGGATCGTTACCGGCTTGTGTTCGCC TGCACCTACATCGCCGCCGGTTCTACCCTCTTATCCATGATAGCACTCGCCATCCTTGCACGTACTACACCGATC AAGACCTGGCCGATTATTCGGCTCGTCATCATCGCTTGCCTCGCTTTAGGCCTTGGCCTCACTTCCATCCTGTTC TTCAACCAAAGCCGCGTCTTCACCTTTTTGCTGTCACCCTGGGTGCTACCCACCATCGCTCTTGTATGGACAGCC ACCATAATCCTCACCCATGTCAACGGAGAGAACGTTGGCCGTCGCGTGCGTCACTTCCGTCGCCGCCGGTTCTCG GCTTACAACGTCAACCCGTCATTGCCGACCCCTGACATACTTGCGTCTGACGGACGATGGCACAAGATGAAGGAT GAGGCA |
Transcript | >Ophio5|1643 ATGGCGGAATACGAACTCAAGGAGCTGCCGGCTGACAAGTTGCGGCTCTTCAAGAGCCCCATCATCCACAACCGT AATGAACAACCTAGGCGGGGAGACGACAGCCCCGAGGACCAGGGTGATAGTCAACTGCCCAGCTTTCTTCAGGTC TTTTACGATCTCGTCTTCGCGGCCAACTACAATGTCTTCTCTGACACCCAAGAAGTCACCGACTCGTCTAGGTTC AAGGCCTATCTAGGCTACTTCAACCTCTTATGGTTGACATGGCTCCTCGTCACCCTCTTCGACGTCCGATATGTC ACCGACAGCATCTTCACCCGCCTCACGAGGGCCATCCACCTCGGCGTCCTCGTCGGCTTCACTGTCGTCGCCCCA AAGTTTAACCCGGGGGCGCAGCATTTGGAAACAATGCAAGCCATGTTTGAGTACGGCGCAGTGCTGCATCACATC CGAGACTTCAAAAAGGCACGATTCCCTATATATCTACAGATTGCCCTTCACATTGGGGCCGCAATCATCTACTTT GGTCTTACTTTTGGCTTCCGCCCCGGGGAGAGGAGCCACGACTTTGTGGTGTGGTATATCACATCGGCGGCCGAG GCCATGGTCACCATTCTCCTATCCAACCTCTATCCAGTTCTCAGCTTCACCGATACCCATCTCATCAAGCGGTTG ACGCTCCTGACTGTCATCATCATTGGCGATGGCATCATTCAGGTGGCAAGGGAGGTTGTGACCATTGTCAAGAAT CCAGATGCCTGGGACGGTGTCACGATTGGGCTTGTCACGGCCGCCGTCGCCACCATATACTTTGTTTTCCTCCTC TATTTCGACTGGCTTCGAGACTCGTTCCACCTCCCGGCCATTCGACAGCAGTTGTGGATGGGCGTTCACCTGCCC TTTCACCTGTCCCTCATTCTTTTCACTCAGGGCTTCACGCAATTCCTCATCTGGTCCAAGATCATGGACGTTCTC AACACCCTGAGCATGGGCTTCGGCCGCGCAGGCCATGAATGGCTGCTGAATGCCACGAGCCAAGACGTCCAGGCC CGGCTCAACGATAGCACTCAGGCCTTCTTCATGATGTTCCCGCCCAAGATTCCCAGCACCTGGGTGACCATCGAC GATGCCATCTCCAATGTCACCCTGATTCCCGACATCTTCTGGACCGAGCTCGCCAACTACTACGAAACCCACGAT GCTTCCGTCTTCAACGCGACCGACATCGAGGCCGCAGAAGTCTTTTCCGACGTACTCCAAGCCACCATGTCGTCC ATGGCCAATGCGCTGTTTGCCACCTTTGGCATGGATCTCGAGAGCGAGGTGACCAACAAGAATCCCCGGCTCCAC GACGATATCAGGGGAGGGGGTTTCCAGGGAGAGGTCCAGTATGAGACGTGGGATCGTTACCGGCTTGTGTTCGCC TGCACCTACATCGCCGCCGGTTCTACCCTCTTATCCATGATAGCACTCGCCATCCTTGCACGTACTACACCGATC AAGACCTGGCCGATTATTCGGCTCGTCATCATCGCTTGCCTCGCTTTAGGCCTTGGCCTCACTTCCATCCTGTTC TTCAACCAAAGCCGCGTCTTCACCTTTTTGCTGTCACCCTGGGTGCTACCCACCATCGCTCTTGTATGGACAGCC ACCATAATCCTCACCCATGTCAACGGAGAGAACGTTGGCCGTCGCGTGCGTCACTTCCGTCGCCGCCGGTTCTCG GCTTACAACGTCAACCCGTCATTGCCGACCCCTGACATACTTGCGTCTGACGGACGATGGCACAAGATGAAGGAT GAGGCATGA |
Gene | >Ophio5|1643 ATGGCGGAATACGAACTCAAGGAGCTGCCGGCTGACAAGTTGCGGCTCTTCAAGAGCCCCATCATCCACAACCGT AATGAACAACCTAGGCGGGGAGACGACAGCCCCGAGGACCAGGGTGATAGTCAACTGCCCAGCTTTCTTCAGGTA TGTTCATCACCCGGCACTCATCACACCGTCGCCGGTGATGCTGATTCGGCGGCCCCCGCTAGCGCGCCGAGCCTA CGCTGCTCGAGGTCTTTTACGATCTCGTCTTCGCGGCCAACTACAATGTCTTCTCTGACACCCAAGAAGTCACCG ACTCGTCTAGGTTCAAGGCCTATCTAGGCTACTTCAAGTGAATACTACCTCGTCGCTGACCTGGAAAGCCCTTGT GCTGACGCTCGGTTGCGATAGCCTCTTATGGTTGACATGGCTCCTCGTCACCCTCTTCGACGTCCGATATGTCAC CGACAGCATCTTCAGTAAGGCTCTTTCCTGCTTCATCAAACCCTTTCCAGCCGCTGACTTACATGGCAGCCCGCC TCACGAGGGCCATCCACCTCGGCGTCCTCGTCGGCTTCACTGTCGTCGCCCCAAAGTTTAACCCGGGGGCGCAGC ATTTGGAAACAATGCAAGCCATGTGTACGTCTAAACCCGCTGGCTAATACACTTGGAAGATGCTAACTGAAGCAG CCTTGATTTTGATGGTCTCGCGCGTGTGCTTGGCAGTTGAGTACGGCGCAGTGCTGCATCACATCCGAGACTTCA AAAAGGCACGATTCCCTATATATCTACAGATTGCCCTTCACATTGGGGCCGCAATCATCTACTTTGGTCTTACTT TTGGCTTCCGCCCCGGGGAGAGGAGCCACGACTTTGTGGTGTGGTATATCACATCGGCGGCCGAGGCCATGGTCA CCATTCTCCTATCCAACCTCTATCCAGTTCTCAGCTTCACCGATACCCATCTCATCAAGCGGTTGACGCTCCTGA CTGTCATCATCATTGGCGATGGCATCATTCAGGTGGCAAGGGAGGTTGTGACCATTGTCAAGAATCCAGATGCCT GGGGTGAGTGGCCACTTGGTCCTCAGATGAACGCTTCTTTTTCTTTGCCAGGCTGCTGACCAGAGCAAAGACGGT GTCACGATTGGGCTTGTCACGGCCGCCGTCGCCACCATATACTTTGTTTTCCTCCTCTATTTCGACTGGCTTCGA GACTCGTTCCACCTCCCGGCCATTCGACAGCAGTTGTGGATGGGCGTTCACCTGCCCTTTCACCTGTCCCTCATT CTTTTCACTCAGGGCTTCACGCAATTCCTCATCTGGTCCAAGATCATGGACGTTCTCAACACCCTGAGCATGGGC TTCGGCCGCGCAGGCCATGAATGGCTGCTGAATGCCACGAGCCAAGACGTCCAGGCCCGGCTCAACGATAGCACT CAGGCCTTCTTCATGATGTTCCCGCCCAAGATTCCCAGCACCTGGGTGACCATCGACGATGCCATCTCCAATGTC ACCCTGATTCCCGACATCTTCTGGACCGAGCTCGCCAACTACTACGAAACCCACGATGCTTCCGTCTTCAACGCG ACCGACATCGAGGCCGCAGAAGTCTTTTCCGACGTACTCCAAGCCACCATGTCGTCCATGGCCAATGCGCTGTTT GCCACCTTTGGCATGGATCTCGAGAGCGAGGTGACCAACAAGAATCCCCGGCTCCACGACGATATCAGGGGAGGG GGTTTCCAGGGAGAGGTCCAGTATGAGACGTGGGATCGTTACCGGCTTGTGGTGCGTTGTGAATCTCGACAAGCC GTGACGTGATGCTAACGTCCGTGTCGTAGTTCGCCTGCACCTACATCGCCGCCGGTTCTACCCTCTTATCCATGA TAGCACTCGCCATCCTTGCACGTACTACACCGATCAAGACCTGGCCGATTATTCGGCTCGTCATCATCGCTTGCC TCGCTTTAGGCCTTGGCCTCACTTCCATCCTGTTCTTCAACCAAAGCCGCGTCTTCACCTTTTTGCTGTCACCCT GGGTGCTACCCACCATCGCTCTTGTATGGACAGCCACCATAATCCTCACCCATGTCAACGGAGAGAACGTTGGCC GTCGCGTGCGTCACTTCCGTCGCCGCCGGTTCTCGGCTTACAACGTCAACCCGTCATTGCCGACCCCTGACATAC TTGCGTCTGACGGACGATGGCACAAGATGAAGGATGAGGCATGA |