Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1640
Gene name
Locationscaffold_16:61132..62160
Strand-
Gene length (bp)1028
Transcript length (bp)855
Coding sequence length (bp)852
Protein length (aa) 284

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00397 WW WW domain 2.1E-06 70 100

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1640
MSFLKNFTKDLDRFGLGDKKQDQPPQNQQSSSGYGYHGGYGNDRPPSPAAQYHAAPPQPAYQPPSDKPPLPAGWR
PLFDQENQRWYYLEEDSGRTQWEAPGYNAPSPPMGGFAPPVGPPPGHAHASYGPPDGPPPSYGQGQHGAPDGPPP
GRFEADYGGHAPQEKQSGGKGGMLLGAAGGLAAGAAGGALLHRMNSDRHDQDENYASYGQQIPPSESYGHATATE
EESGRHDENQESSSSSSSSSDDRGRRDERDESSSSSSDDDRREDRYDDDRYDSGSDDDY
Coding >Ophio5|1640
ATGTCTTTTCTCAAGAACTTTACCAAGGACCTAGACAGGTTCGGCCTTGGCGATAAGAAGCAGGACCAACCTCCG
CAGAACCAGCAGTCCAGTTCCGGATACGGCTATCACGGTGGATACGGTAATGACCGACCCCCTTCTCCGGCCGCT
CAATATCATGCCGCGCCTCCGCAGCCGGCCTACCAGCCGCCGTCCGACAAGCCGCCTCTGCCGGCCGGCTGGAGG
CCTCTATTCGACCAGGAGAACCAGCGATGGTACTACCTCGAAGAGGACAGCGGTCGCACCCAGTGGGAAGCCCCT
GGCTACAACGCGCCATCGCCCCCCATGGGCGGCTTCGCGCCTCCCGTCGGTCCGCCCCCGGGCCACGCTCATGCG
AGTTACGGGCCGCCTGACGGGCCACCTCCGAGCTACGGTCAGGGACAACATGGTGCTCCTGACGGGCCGCCTCCG
GGCCGTTTCGAAGCCGATTACGGGGGCCACGCACCGCAGGAGAAGCAGAGCGGCGGCAAAGGCGGCATGCTCCTC
GGCGCCGCCGGAGGACTCGCCGCCGGGGCAGCCGGAGGCGCTCTCCTTCACCGTATGAATAGCGACAGGCACGAC
CAAGACGAAAATTACGCGTCGTACGGCCAGCAAATTCCACCGTCTGAGTCGTACGGCCACGCCACGGCAACTGAG
GAGGAGTCCGGCCGTCACGACGAAAACCAAGAAAGCAGCTCCTCCTCCTCCTCATCCAGCGATGACCGCGGACGG
CGCGACGAACGCGACGAATCCAGCTCCAGCAGCAGTGACGACGACCGGCGCGAGGACAGATATGACGATGATCGA
TATGATAGTGGTAGCGATGACGACTAC
Transcript >Ophio5|1640
ATGTCTTTTCTCAAGAACTTTACCAAGGACCTAGACAGGTTCGGCCTTGGCGATAAGAAGCAGGACCAACCTCCG
CAGAACCAGCAGTCCAGTTCCGGATACGGCTATCACGGTGGATACGGTAATGACCGACCCCCTTCTCCGGCCGCT
CAATATCATGCCGCGCCTCCGCAGCCGGCCTACCAGCCGCCGTCCGACAAGCCGCCTCTGCCGGCCGGCTGGAGG
CCTCTATTCGACCAGGAGAACCAGCGATGGTACTACCTCGAAGAGGACAGCGGTCGCACCCAGTGGGAAGCCCCT
GGCTACAACGCGCCATCGCCCCCCATGGGCGGCTTCGCGCCTCCCGTCGGTCCGCCCCCGGGCCACGCTCATGCG
AGTTACGGGCCGCCTGACGGGCCACCTCCGAGCTACGGTCAGGGACAACATGGTGCTCCTGACGGGCCGCCTCCG
GGCCGTTTCGAAGCCGATTACGGGGGCCACGCACCGCAGGAGAAGCAGAGCGGCGGCAAAGGCGGCATGCTCCTC
GGCGCCGCCGGAGGACTCGCCGCCGGGGCAGCCGGAGGCGCTCTCCTTCACCGTATGAATAGCGACAGGCACGAC
CAAGACGAAAATTACGCGTCGTACGGCCAGCAAATTCCACCGTCTGAGTCGTACGGCCACGCCACGGCAACTGAG
GAGGAGTCCGGCCGTCACGACGAAAACCAAGAAAGCAGCTCCTCCTCCTCCTCATCCAGCGATGACCGCGGACGG
CGCGACGAACGCGACGAATCCAGCTCCAGCAGCAGTGACGACGACCGGCGCGAGGACAGATATGACGATGATCGA
TATGATAGTGGTAGCGATGACGACTACTGA
Gene >Ophio5|1640
ATGTCTTTTCTCAAGAACTTTACCAAGGACCTAGACAGGTTCGGCCTTGGCGATAAGAAGCAGGACCAACCTCCG
CAGAGTATGAATACCCCATCGTCACCACACACCGACGTCATCTTCCAACCCCCCCCTCCCCCCGCCGACTCACGC
CCCCCCCCCCCCCCCCCCCCCCCCCTTCCCCCCTTTCCCTCTCTCTCTCTCCGTCACGAAGAAACTCGTTGACAG
AAACACCCGTGTTGATCCCTTTCTCAGACCAGCAGTCCAGTTCCGGATACGGCTATCACGGTGGATACGGTAATG
ACCGACCCCCTTCTCCGGCCGCTCAATATCATGCCGCGCCTCCGCAGCCGGCCTACCAGCCGCCGTCCGACAAGC
CGCCTCTGCCGGCCGGCTGGAGGCCTCTATTCGACCAGGAGAACCAGCGATGGTACTACCTCGAAGAGGACAGCG
GTCGCACCCAGTGGGAAGCCCCTGGCTACAACGCGCCATCGCCCCCCATGGGCGGCTTCGCGCCTCCCGTCGGTC
CGCCCCCGGGCCACGCTCATGCGAGTTACGGGCCGCCTGACGGGCCACCTCCGAGCTACGGTCAGGGACAACATG
GTGCTCCTGACGGGCCGCCTCCGGGCCGTTTCGAAGCCGATTACGGGGGCCACGCACCGCAGGAGAAGCAGAGCG
GCGGCAAAGGCGGCATGCTCCTCGGCGCCGCCGGAGGACTCGCCGCCGGGGCAGCCGGAGGCGCTCTCCTTCACC
GTATGAATAGCGACAGGCACGACCAAGACGAAAATTACGCGTCGTACGGCCAGCAAATTCCACCGTCTGAGTCGT
ACGGCCACGCCACGGCAACTGAGGAGGAGTCCGGCCGTCACGACGAAAACCAAGAAAGCAGCTCCTCCTCCTCCT
CATCCAGCGATGACCGCGGACGGCGCGACGAACGCGACGAATCCAGCTCCAGCAGCAGTGACGACGACCGGCGCG
AGGACAGATATGACGATGATCGATATGATAGTGGTAGCGATGACGACTACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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