© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|1640 |
| Gene name | |
| Location | scaffold_16:61132..62160 |
| Strand | - |
| Gene length (bp) | 1028 |
| Transcript length (bp) | 855 |
| Coding sequence length (bp) | 852 |
| Protein length (aa) | 284 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00397 | WW | WW domain | 2.1E-06 | 70 | 100 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1640 MSFLKNFTKDLDRFGLGDKKQDQPPQNQQSSSGYGYHGGYGNDRPPSPAAQYHAAPPQPAYQPPSDKPPLPAGWR PLFDQENQRWYYLEEDSGRTQWEAPGYNAPSPPMGGFAPPVGPPPGHAHASYGPPDGPPPSYGQGQHGAPDGPPP GRFEADYGGHAPQEKQSGGKGGMLLGAAGGLAAGAAGGALLHRMNSDRHDQDENYASYGQQIPPSESYGHATATE EESGRHDENQESSSSSSSSSDDRGRRDERDESSSSSSDDDRREDRYDDDRYDSGSDDDY |
| Coding | >Ophio5|1640 ATGTCTTTTCTCAAGAACTTTACCAAGGACCTAGACAGGTTCGGCCTTGGCGATAAGAAGCAGGACCAACCTCCG CAGAACCAGCAGTCCAGTTCCGGATACGGCTATCACGGTGGATACGGTAATGACCGACCCCCTTCTCCGGCCGCT CAATATCATGCCGCGCCTCCGCAGCCGGCCTACCAGCCGCCGTCCGACAAGCCGCCTCTGCCGGCCGGCTGGAGG CCTCTATTCGACCAGGAGAACCAGCGATGGTACTACCTCGAAGAGGACAGCGGTCGCACCCAGTGGGAAGCCCCT GGCTACAACGCGCCATCGCCCCCCATGGGCGGCTTCGCGCCTCCCGTCGGTCCGCCCCCGGGCCACGCTCATGCG AGTTACGGGCCGCCTGACGGGCCACCTCCGAGCTACGGTCAGGGACAACATGGTGCTCCTGACGGGCCGCCTCCG GGCCGTTTCGAAGCCGATTACGGGGGCCACGCACCGCAGGAGAAGCAGAGCGGCGGCAAAGGCGGCATGCTCCTC GGCGCCGCCGGAGGACTCGCCGCCGGGGCAGCCGGAGGCGCTCTCCTTCACCGTATGAATAGCGACAGGCACGAC CAAGACGAAAATTACGCGTCGTACGGCCAGCAAATTCCACCGTCTGAGTCGTACGGCCACGCCACGGCAACTGAG GAGGAGTCCGGCCGTCACGACGAAAACCAAGAAAGCAGCTCCTCCTCCTCCTCATCCAGCGATGACCGCGGACGG CGCGACGAACGCGACGAATCCAGCTCCAGCAGCAGTGACGACGACCGGCGCGAGGACAGATATGACGATGATCGA TATGATAGTGGTAGCGATGACGACTAC |
| Transcript | >Ophio5|1640 ATGTCTTTTCTCAAGAACTTTACCAAGGACCTAGACAGGTTCGGCCTTGGCGATAAGAAGCAGGACCAACCTCCG CAGAACCAGCAGTCCAGTTCCGGATACGGCTATCACGGTGGATACGGTAATGACCGACCCCCTTCTCCGGCCGCT CAATATCATGCCGCGCCTCCGCAGCCGGCCTACCAGCCGCCGTCCGACAAGCCGCCTCTGCCGGCCGGCTGGAGG CCTCTATTCGACCAGGAGAACCAGCGATGGTACTACCTCGAAGAGGACAGCGGTCGCACCCAGTGGGAAGCCCCT GGCTACAACGCGCCATCGCCCCCCATGGGCGGCTTCGCGCCTCCCGTCGGTCCGCCCCCGGGCCACGCTCATGCG AGTTACGGGCCGCCTGACGGGCCACCTCCGAGCTACGGTCAGGGACAACATGGTGCTCCTGACGGGCCGCCTCCG GGCCGTTTCGAAGCCGATTACGGGGGCCACGCACCGCAGGAGAAGCAGAGCGGCGGCAAAGGCGGCATGCTCCTC GGCGCCGCCGGAGGACTCGCCGCCGGGGCAGCCGGAGGCGCTCTCCTTCACCGTATGAATAGCGACAGGCACGAC CAAGACGAAAATTACGCGTCGTACGGCCAGCAAATTCCACCGTCTGAGTCGTACGGCCACGCCACGGCAACTGAG GAGGAGTCCGGCCGTCACGACGAAAACCAAGAAAGCAGCTCCTCCTCCTCCTCATCCAGCGATGACCGCGGACGG CGCGACGAACGCGACGAATCCAGCTCCAGCAGCAGTGACGACGACCGGCGCGAGGACAGATATGACGATGATCGA TATGATAGTGGTAGCGATGACGACTACTGA |
| Gene | >Ophio5|1640 ATGTCTTTTCTCAAGAACTTTACCAAGGACCTAGACAGGTTCGGCCTTGGCGATAAGAAGCAGGACCAACCTCCG CAGAGTATGAATACCCCATCGTCACCACACACCGACGTCATCTTCCAACCCCCCCCTCCCCCCGCCGACTCACGC CCCCCCCCCCCCCCCCCCCCCCCCCTTCCCCCCTTTCCCTCTCTCTCTCTCCGTCACGAAGAAACTCGTTGACAG AAACACCCGTGTTGATCCCTTTCTCAGACCAGCAGTCCAGTTCCGGATACGGCTATCACGGTGGATACGGTAATG ACCGACCCCCTTCTCCGGCCGCTCAATATCATGCCGCGCCTCCGCAGCCGGCCTACCAGCCGCCGTCCGACAAGC CGCCTCTGCCGGCCGGCTGGAGGCCTCTATTCGACCAGGAGAACCAGCGATGGTACTACCTCGAAGAGGACAGCG GTCGCACCCAGTGGGAAGCCCCTGGCTACAACGCGCCATCGCCCCCCATGGGCGGCTTCGCGCCTCCCGTCGGTC CGCCCCCGGGCCACGCTCATGCGAGTTACGGGCCGCCTGACGGGCCACCTCCGAGCTACGGTCAGGGACAACATG GTGCTCCTGACGGGCCGCCTCCGGGCCGTTTCGAAGCCGATTACGGGGGCCACGCACCGCAGGAGAAGCAGAGCG GCGGCAAAGGCGGCATGCTCCTCGGCGCCGCCGGAGGACTCGCCGCCGGGGCAGCCGGAGGCGCTCTCCTTCACC GTATGAATAGCGACAGGCACGACCAAGACGAAAATTACGCGTCGTACGGCCAGCAAATTCCACCGTCTGAGTCGT ACGGCCACGCCACGGCAACTGAGGAGGAGTCCGGCCGTCACGACGAAAACCAAGAAAGCAGCTCCTCCTCCTCCT CATCCAGCGATGACCGCGGACGGCGCGACGAACGCGACGAATCCAGCTCCAGCAGCAGTGACGACGACCGGCGCG AGGACAGATATGACGATGATCGATATGATAGTGGTAGCGATGACGACTACTGA |