© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|1619 |
| Gene name | |
| Location | scaffold_16:2116..2615 |
| Strand | + |
| Gene length (bp) | 499 |
| Transcript length (bp) | 402 |
| Coding sequence length (bp) | 399 |
| Protein length (aa) | 133 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P42117|NDUA3_NEUCR | NADH-ubiquinone oxidoreductase 9.5 kDa subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo9.5 PE=1 SV=3 | 42 | 117 | 1.0E-24 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Mitochondrial transit peptide | 0.2134 | 0.1377 | 0.0737 | 0.0661 | 0.8389 | 0.2679 | 0.2416 | 0.0894 | 0.1025 | 0.0598 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 64 | 83 | 19 |
| Orthofinder run ID | 4 |
| Orthogroup | 2742 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1619 MGSFIRATTIAPTSLAFGSSPHHHRTHFTERKPEQLKLLAMSSAPYFWSAPIGYCRWALRERPAIFWSIVIGAAG PIAMPIVPPLRRYFGDVDAPQVPVTYPVPPGPRKVLSGFDDEEPVLSVRRPSKPAAEQ |
| Coding | >Ophio5|1619 ATGGGGAGCTTCATACGAGCCACCACCATAGCTCCGACGTCTCTCGCCTTCGGGAGCTCACCGCATCACCACCGC ACTCATTTCACCGAGAGAAAGCCTGAACAGCTAAAACTCCTCGCCATGTCCTCGGCACCCTACTTCTGGTCCGCG CCCATCGGATACTGCCGCTGGGCCTTACGCGAGCGCCCCGCCATCTTCTGGTCCATCGTCATCGGCGCCGCTGGT CCCATTGCCATGCCAATTGTGCCTCCTCTGCGCCGCTACTTTGGCGACGTCGATGCGCCGCAGGTTCCCGTCACC TATCCCGTTCCTCCCGGTCCGCGCAAGGTCCTGTCCGGCTTCGACGATGAAGAGCCGGTCTTGTCTGTCCGTCGC CCGTCAAAACCCGCCGCTGAACAA |
| Transcript | >Ophio5|1619 ATGGGGAGCTTCATACGAGCCACCACCATAGCTCCGACGTCTCTCGCCTTCGGGAGCTCACCGCATCACCACCGC ACTCATTTCACCGAGAGAAAGCCTGAACAGCTAAAACTCCTCGCCATGTCCTCGGCACCCTACTTCTGGTCCGCG CCCATCGGATACTGCCGCTGGGCCTTACGCGAGCGCCCCGCCATCTTCTGGTCCATCGTCATCGGCGCCGCTGGT CCCATTGCCATGCCAATTGTGCCTCCTCTGCGCCGCTACTTTGGCGACGTCGATGCGCCGCAGGTTCCCGTCACC TATCCCGTTCCTCCCGGTCCGCGCAAGGTCCTGTCCGGCTTCGACGATGAAGAGCCGGTCTTGTCTGTCCGTCGC CCGTCAAAACCCGCCGCTGAACAATGA |
| Gene | >Ophio5|1619 ATGGGGAGCTTCATACGAGCCACCACCATAGCTCCGACGTCTCTCGCCTTCGGGAGCTCACCGCATCACCACCGC ACTCATTTCACCGAGAGAAAGCCTGAACAGCTAAAACTCCTCGCCATGTCCTCGGCACCCTACTTCTGGTCCGCG CCCATCGGATACTGCCGCTGGGCCTTACGCGAGCGCCCCGCCATCTTCTGGTCCATCGTCATCGGCGCCGCTGGT CCCATTGCCATGCCAATTGTGCCTCCTCTGCGCCGCTACTTTGGCGACGTCGATGCGCCGCAGGTTCCCGTCACC TATCCCGGTAATGCCCAGGCTTCCTCTGGCCTTTTCCCGTCTTTGACATCGTCGCTTGACCACTGCTTCCCTCGT CCCGTCCTGCTGATGCCACTTTTCTCCAGTTCCTCCCGGTCCGCGCAAGGTCCTGTCCGGCTTCGACGATGAAGA GCCGGTCTTGTCTGTCCGTCGCCCGTCAAAACCCGCCGCTGAACAATGA |