Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1611
Gene name
Locationscaffold_159:25254..26332
Strand+
Gene length (bp)1078
Transcript length (bp)960
Coding sequence length (bp)957
Protein length (aa) 319

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13472 Lipase_GDSL_2 GDSL-like Lipase/Acylhydrolase family 1.7E-17 72 259
PF00657 Lipase_GDSL GDSL-like Lipase/Acylhydrolase 1.1E-06 71 264

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016788 hydrolase activity, acting on ester bonds Yes
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1611
MRAPLLAVACCLLRLTVAAAVGLEVALERDLAPRLVARTNTSSSSVLNPRQNLTAPGNGRGIQSGPQLRLLCAGD
SITAGTFSETDGGDGNGYRLRLRDDLSADRVVFAGTETAPNGTMNDGFFAAWPGKTIKFITDNIGPSLQQRPNVI
LLHAGTNDMNPDPAISTEGNNPAEAVKRLGVLVDRMVETCPDAVVLVAMIINTCNETQAPATQEFQRQIPDMVRQ
RFEDGRRVLAANITSFPSDQLRDCIHPNNDGYRLLGDYWSDFVRQVPEDWLHDPEEANNAGEPSASASMRLAPLP
SMWPMTVAAAIVAGSIVGW
Coding >Ophio5|1611
ATGCGGGCTCCTCTGCTGGCGGTCGCCTGCTGCCTGCTCAGGCTTACCGTCGCCGCCGCGGTTGGCCTAGAAGTC
GCGCTTGAGAGAGATCTGGCCCCGAGGCTGGTGGCAAGGACCAACACTTCTTCCAGCTCGGTATTAAATCCGCGG
CAGAACCTGACGGCGCCGGGCAATGGCCGTGGGATACAATCCGGGCCGCAGCTGCGCCTCCTGTGTGCCGGCGAT
TCAATCACGGCCGGGACGTTCAGCGAAACCGATGGCGGCGACGGAAATGGCTATAGGCTTCGGCTACGAGACGAC
TTGTCGGCCGACAGGGTTGTCTTTGCAGGAACCGAGACGGCCCCGAACGGGACGATGAACGACGGCTTCTTTGCG
GCCTGGCCCGGCAAGACGATCAAATTCATCACCGACAACATCGGACCGTCGCTGCAGCAGCGCCCAAACGTGATT
CTCTTGCACGCGGGAACCAATGACATGAATCCCGACCCCGCCATCTCGACCGAGGGCAACAATCCGGCCGAGGCG
GTGAAACGACTGGGCGTGCTGGTGGACCGCATGGTCGAGACGTGCCCCGACGCCGTCGTGCTCGTGGCCATGATC
ATCAACACGTGCAACGAGACGCAGGCGCCGGCGACGCAGGAGTTCCAGAGGCAGATCCCAGACATGGTGCGGCAG
AGGTTCGAGGACGGGAGGCGCGTGCTGGCAGCCAACATAACATCCTTTCCCTCGGACCAGCTCAGGGACTGCATC
CACCCGAACAACGACGGGTACCGGCTGCTGGGAGACTACTGGTCCGACTTTGTGAGGCAAGTTCCCGAGGACTGG
CTGCATGATCCTGAGGAGGCCAACAACGCCGGAGAACCGTCGGCGTCAGCTAGTATGCGCCTTGCGCCGTTGCCG
TCAATGTGGCCGATGACGGTGGCCGCGGCCATCGTGGCAGGGAGCATCGTGGGCTGG
Transcript >Ophio5|1611
ATGCGGGCTCCTCTGCTGGCGGTCGCCTGCTGCCTGCTCAGGCTTACCGTCGCCGCCGCGGTTGGCCTAGAAGTC
GCGCTTGAGAGAGATCTGGCCCCGAGGCTGGTGGCAAGGACCAACACTTCTTCCAGCTCGGTATTAAATCCGCGG
CAGAACCTGACGGCGCCGGGCAATGGCCGTGGGATACAATCCGGGCCGCAGCTGCGCCTCCTGTGTGCCGGCGAT
TCAATCACGGCCGGGACGTTCAGCGAAACCGATGGCGGCGACGGAAATGGCTATAGGCTTCGGCTACGAGACGAC
TTGTCGGCCGACAGGGTTGTCTTTGCAGGAACCGAGACGGCCCCGAACGGGACGATGAACGACGGCTTCTTTGCG
GCCTGGCCCGGCAAGACGATCAAATTCATCACCGACAACATCGGACCGTCGCTGCAGCAGCGCCCAAACGTGATT
CTCTTGCACGCGGGAACCAATGACATGAATCCCGACCCCGCCATCTCGACCGAGGGCAACAATCCGGCCGAGGCG
GTGAAACGACTGGGCGTGCTGGTGGACCGCATGGTCGAGACGTGCCCCGACGCCGTCGTGCTCGTGGCCATGATC
ATCAACACGTGCAACGAGACGCAGGCGCCGGCGACGCAGGAGTTCCAGAGGCAGATCCCAGACATGGTGCGGCAG
AGGTTCGAGGACGGGAGGCGCGTGCTGGCAGCCAACATAACATCCTTTCCCTCGGACCAGCTCAGGGACTGCATC
CACCCGAACAACGACGGGTACCGGCTGCTGGGAGACTACTGGTCCGACTTTGTGAGGCAAGTTCCCGAGGACTGG
CTGCATGATCCTGAGGAGGCCAACAACGCCGGAGAACCGTCGGCGTCAGCTAGTATGCGCCTTGCGCCGTTGCCG
TCAATGTGGCCGATGACGGTGGCCGCGGCCATCGTGGCAGGGAGCATCGTGGGCTGGTGA
Gene >Ophio5|1611
ATGCGGGCTCCTCTGCTGGCGGTCGCCTGCTGCCTGCTCAGGCTTACCGTCGCCGCCGCGGTTGGCCTAGAAGTC
GCGCTTGAGAGAGATCTGGCCCCGAGGCTGGTGGCAAGGACCAACACTTCTTCCAGCTCGGTATTAAATCCGCGG
CAGAACCTGACGGCGCCGGGCAATGGCCGTGGGATACAATCCGGGCCGCAGCTGCGCCTCCTGTGTGCCGGCGAT
TCAATCACGGCCGGGACGTTCAGCGAAACCGATGGCGGCGACGGAAATGGCTATAGGCTTCGGCTACGAGACGAC
TTGTCGGGTGAGTCGTGTGCGACGCAGTGACGTTGGGGCGCGAGTGCCAACTGACAGCGGATGTCTCAGCCGACA
GGGTTGTCTTTGCAGGAACCGAGACGGCCCCGAACGGGACGATGAACGACGGCTTCTTTGTAAGTCGACATTGAC
GAGCTTGGTGGCAGGATGCTGACACTCTCGTCTCCTAAAGGCGGCCTGGCCCGGCAAGACGATCAAATTCATCAC
CGACAACATCGGACCGTCGCTGCAGCAGCGCCCAAACGTGATTCTCTTGCACGCGGGAACCAATGACATGAATCC
CGACCCCGCCATCTCGACCGAGGGCAACAATCCGGCCGAGGCGGTGAAACGACTGGGCGTGCTGGTGGACCGCAT
GGTCGAGACGTGCCCCGACGCCGTCGTGCTCGTGGCCATGATCATCAACACGTGCAACGAGACGCAGGCGCCGGC
GACGCAGGAGTTCCAGAGGCAGATCCCAGACATGGTGCGGCAGAGGTTCGAGGACGGGAGGCGCGTGCTGGCAGC
CAACATAACATCCTTTCCCTCGGACCAGCTCAGGGACTGCATCCACCCGAACAACGACGGGTACCGGCTGCTGGG
AGACTACTGGTCCGACTTTGTGAGGCAAGTTCCCGAGGACTGGCTGCATGATCCTGAGGAGGCCAACAACGCCGG
AGAACCGTCGGCGTCAGCTAGTATGCGCCTTGCGCCGTTGCCGTCAATGTGGCCGATGACGGTGGCCGCGGCCAT
CGTGGCAGGGAGCATCGTGGGCTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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