Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|1575
Gene name
Location	scaffold_157:8319..10600
Strand	+
Gene length (bp)	2281
Transcript length (bp)	2073
Coding sequence length (bp)	2070
Protein length (aa)	690

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06011	TRP	Transient receptor potential (TRP) ion channel	1.0E-130	212	623
PF14558	TRP_N	ML-like domain	9.2E-39	67	207

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P39719\|FLC2_YEAST	Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2	64	663	1.0E-117
sp\|P53121\|FLC3_YEAST	Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1	50	662	5.0E-112
sp\|Q08967\|FLC1_YEAST	Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1	50	665	2.0E-111
sp\|Q08844\|YO365_YEAST	Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1	60	624	4.0E-96
sp\|Q09917\|PKD2_SCHPO	TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1	64	651	4.0E-82

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P39719\|FLC2_YEAST	Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2	64	663	1.0E-117
sp\|P53121\|FLC3_YEAST	Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1	50	662	5.0E-112
sp\|Q08967\|FLC1_YEAST	Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1	50	665	2.0E-111
sp\|Q08844\|YO365_YEAST	Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1	60	624	4.0E-96
sp\|Q09917\|PKD2_SCHPO	TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1	64	651	4.0E-82
sp\|O74520\|YCPE_SCHPO	Uncharacterized membrane protein C663.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.14c PE=3 SV=2	74	561	4.0E-23

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 63	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	43	62	19
2	361	383	22
3	412	434	22
4	444	466	22
5	486	508	22
6	512	531	19
7	543	565	22
8	575	597	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	96.33	50.73	141.94
CcL	In ants, during behavior modification	3.98	0.99	6.97
CcD	In ants, recently dead	9.94	4.19	15.69

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.000286	yes
SC16a	CcD	0.000286	yes
CcL	CcD	0.005848	yes

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|1575 MRARPERKLQGGKKRQRLPACSKCQLPGRRPFRRHLSFQDRDAISSWSTLLLAVATLPLAMGERLLMSKSLNACQ QESSFTASLFHVVYTPSNSSATVEMSITSSIRGKVVFDLAISAYGYQFLRRTVDPCDMDLAGLCPMVAGKTSFQF NLPVDKKNADQIPSIAYNIPDLDAAVRVYVNRTSADAGSPGISVACLEAAISNGRTVNLLGVKWATAVTAGLALL SSAVVNGLGHFNAAAHVAANSLSLFSYFQAQAIIGLASVRLPPIVQAWTLNFQWSMGIIRINFIRNLCTWYQRST GGAPSQVFNALSTVSVQVAKRSLAGAKQPFKRGDITIGTGAYIVYGIQRVAFQSNIESTNLFMTGLICFYILIIG TILAVAAFRGVCGLCARQNWTNKFLEFRNGWRTILKGILLRLALIAYPQMSILCLWEFTQVDSPAEVVLAVFGFF SLTLTLFWGATYILFADPKVLNKWGFLYIQFRASAYYFIFPTLGYILAKSMLIAFGQHGSGGIAQAVGLVIIEAA ALISASVMRPWMDKSTNSFNIAICAVNFFNAICLMVFTNVLGAPTLIVGIFSIILFIVNAAFSLTLLIMLIISTT ITVFRKDPDARYQIMADDRASFVKSMTQLTATNIELEALAATARGQEGRSSRADEENEALHQDGRHRMAYRKMHS ESPSLCNRSGSSLAY
Coding	>Ophio5\|1575 ATGCGAGCGCGTCCCGAACGCAAACTCCAGGGCGGCAAGAAACGTCAGCGCCTGCCAGCTTGTTCAAAGTGCCAG CTTCCAGGAAGACGTCCTTTTCGTCGACATCTTTCCTTTCAGGATCGCGACGCTATCTCCTCTTGGTCCACGCTG CTGCTGGCCGTGGCTACGCTTCCACTGGCCATGGGAGAGCGGTTGCTCATGTCCAAGTCGCTCAACGCCTGCCAG CAGGAAAGCAGCTTCACGGCGTCACTCTTCCATGTCGTCTATACGCCAAGCAATAGTTCAGCTACAGTGGAGATG TCCATCACTTCATCGATAAGGGGCAAAGTCGTGTTTGACCTAGCGATTTCTGCCTATGGTTACCAATTCCTTCGC CGTACCGTCGACCCATGTGATATGGATCTTGCTGGCCTCTGTCCGATGGTCGCCGGGAAAACTTCGTTTCAGTTC AACCTTCCCGTCGATAAAAAAAATGCCGATCAGATACCCAGCATTGCATATAACATACCAGACCTGGATGCTGCC GTCCGGGTTTACGTCAACCGAACGTCAGCCGATGCGGGTTCACCTGGCATTAGCGTGGCATGCCTCGAGGCTGCC ATCTCAAACGGAAGGACTGTCAACCTGCTCGGTGTCAAGTGGGCTACTGCCGTTACTGCGGGCTTGGCCCTTCTA TCATCCGCTGTTGTCAACGGGCTTGGACACTTTAATGCAGCTGCTCACGTTGCCGCAAACTCGCTATCCCTATTT AGTTATTTCCAGGCCCAGGCTATCATTGGTCTTGCAAGTGTTCGCCTCCCCCCTATCGTTCAAGCCTGGACTCTC AACTTTCAGTGGTCTATGGGCATCATTCGTATCAACTTCATACGGAACCTGTGCACTTGGTATCAAAGATCTACC GGGGGCGCTCCATCCCAGGTCTTTAATGCGTTGAGTACTGTTTCGGTTCAAGTCGCTAAGCGATCTCTGGCTGGC GCAAAGCAACCCTTCAAACGAGGCGACATCACCATAGGCACGGGGGCTTATATCGTATATGGCATCCAGCGCGTG GCGTTTCAGTCAAATATCGAATCCACTAACCTATTCATGACGGGCCTGATATGTTTTTACATCTTAATCATAGGT ACCATTTTGGCTGTCGCCGCTTTCAGGGGAGTATGCGGGCTCTGCGCCCGGCAGAACTGGACGAACAAATTCCTC GAGTTTCGCAACGGCTGGCGGACTATCCTCAAGGGGATTCTTCTCCGTTTAGCTCTTATCGCCTACCCGCAGATG AGCATTCTCTGCCTTTGGGAATTCACCCAGGTCGACTCGCCCGCTGAAGTTGTTCTTGCCGTGTTCGGCTTCTTC AGTCTAACTCTAACCCTATTCTGGGGGGCGACCTATATCTTGTTTGCCGATCCGAAGGTCTTGAATAAGTGGGGA TTTCTTTACATCCAGTTTCGTGCTTCTGCCTACTATTTTATCTTTCCTACTCTAGGCTACATCTTGGCCAAGTCA ATGTTGATCGCTTTCGGACAACATGGCAGTGGCGGCATCGCCCAGGCCGTTGGACTTGTTATCATCGAAGCGGCC GCCTTGATATCTGCGTCGGTTATGCGGCCGTGGATGGATAAGAGCACCAACTCTTTCAACATCGCCATCTGCGCG GTCAATTTCTTCAACGCTATTTGCCTCATGGTATTTACGAATGTTCTCGGGGCACCTACTCTAATAGTCGGCATT TTCAGTATTATTCTTTTCATTGTCAACGCCGCTTTCTCACTAACTCTACTTATCATGCTCATAATATCGACAACA ATTACAGTCTTCCGGAAGGACCCGGACGCCCGCTATCAGATTATGGCCGACGATCGCGCCTCGTTTGTCAAGTCA ATGACACAGCTGACGGCAACGAACATAGAACTCGAGGCCCTGGCTGCTACTGCACGGGGCCAGGAAGGCAGAAGC TCGCGCGCCGACGAGGAGAACGAGGCGCTGCATCAGGATGGTCGCCATCGCATGGCATATCGTAAGATGCATTCG GAATCGCCGAGCCTCTGCAATCGATCTGGATCTTCGCTGGCCTAT
Transcript	>Ophio5\|1575 ATGCGAGCGCGTCCCGAACGCAAACTCCAGGGCGGCAAGAAACGTCAGCGCCTGCCAGCTTGTTCAAAGTGCCAG CTTCCAGGAAGACGTCCTTTTCGTCGACATCTTTCCTTTCAGGATCGCGACGCTATCTCCTCTTGGTCCACGCTG CTGCTGGCCGTGGCTACGCTTCCACTGGCCATGGGAGAGCGGTTGCTCATGTCCAAGTCGCTCAACGCCTGCCAG CAGGAAAGCAGCTTCACGGCGTCACTCTTCCATGTCGTCTATACGCCAAGCAATAGTTCAGCTACAGTGGAGATG TCCATCACTTCATCGATAAGGGGCAAAGTCGTGTTTGACCTAGCGATTTCTGCCTATGGTTACCAATTCCTTCGC CGTACCGTCGACCCATGTGATATGGATCTTGCTGGCCTCTGTCCGATGGTCGCCGGGAAAACTTCGTTTCAGTTC AACCTTCCCGTCGATAAAAAAAATGCCGATCAGATACCCAGCATTGCATATAACATACCAGACCTGGATGCTGCC GTCCGGGTTTACGTCAACCGAACGTCAGCCGATGCGGGTTCACCTGGCATTAGCGTGGCATGCCTCGAGGCTGCC ATCTCAAACGGAAGGACTGTCAACCTGCTCGGTGTCAAGTGGGCTACTGCCGTTACTGCGGGCTTGGCCCTTCTA TCATCCGCTGTTGTCAACGGGCTTGGACACTTTAATGCAGCTGCTCACGTTGCCGCAAACTCGCTATCCCTATTT AGTTATTTCCAGGCCCAGGCTATCATTGGTCTTGCAAGTGTTCGCCTCCCCCCTATCGTTCAAGCCTGGACTCTC AACTTTCAGTGGTCTATGGGCATCATTCGTATCAACTTCATACGGAACCTGTGCACTTGGTATCAAAGATCTACC GGGGGCGCTCCATCCCAGGTCTTTAATGCGTTGAGTACTGTTTCGGTTCAAGTCGCTAAGCGATCTCTGGCTGGC GCAAAGCAACCCTTCAAACGAGGCGACATCACCATAGGCACGGGGGCTTATATCGTATATGGCATCCAGCGCGTG GCGTTTCAGTCAAATATCGAATCCACTAACCTATTCATGACGGGCCTGATATGTTTTTACATCTTAATCATAGGT ACCATTTTGGCTGTCGCCGCTTTCAGGGGAGTATGCGGGCTCTGCGCCCGGCAGAACTGGACGAACAAATTCCTC GAGTTTCGCAACGGCTGGCGGACTATCCTCAAGGGGATTCTTCTCCGTTTAGCTCTTATCGCCTACCCGCAGATG AGCATTCTCTGCCTTTGGGAATTCACCCAGGTCGACTCGCCCGCTGAAGTTGTTCTTGCCGTGTTCGGCTTCTTC AGTCTAACTCTAACCCTATTCTGGGGGGCGACCTATATCTTGTTTGCCGATCCGAAGGTCTTGAATAAGTGGGGA TTTCTTTACATCCAGTTTCGTGCTTCTGCCTACTATTTTATCTTTCCTACTCTAGGCTACATCTTGGCCAAGTCA ATGTTGATCGCTTTCGGACAACATGGCAGTGGCGGCATCGCCCAGGCCGTTGGACTTGTTATCATCGAAGCGGCC GCCTTGATATCTGCGTCGGTTATGCGGCCGTGGATGGATAAGAGCACCAACTCTTTCAACATCGCCATCTGCGCG GTCAATTTCTTCAACGCTATTTGCCTCATGGTATTTACGAATGTTCTCGGGGCACCTACTCTAATAGTCGGCATT TTCAGTATTATTCTTTTCATTGTCAACGCCGCTTTCTCACTAACTCTACTTATCATGCTCATAATATCGACAACA ATTACAGTCTTCCGGAAGGACCCGGACGCCCGCTATCAGATTATGGCCGACGATCGCGCCTCGTTTGTCAAGTCA ATGACACAGCTGACGGCAACGAACATAGAACTCGAGGCCCTGGCTGCTACTGCACGGGGCCAGGAAGGCAGAAGC TCGCGCGCCGACGAGGAGAACGAGGCGCTGCATCAGGATGGTCGCCATCGCATGGCATATCGTAAGATGCATTCG GAATCGCCGAGCCTCTGCAATCGATCTGGATCTTCGCTGGCCTATTGA
Gene	>Ophio5\|1575 ATGCGAGCGCGTCCCGAACGCAAACTCCAGGGCGGCAAGAAACGTCAGCGCCTGCCAGCTTGTTCAAAGTGCCAG CTTCCAGGAAGACGTCCTTTTCGTCGACATCTTTCCTTTCAGGTGGGTCTGGAGTCTACCCCGTTGACTTGGGAC GTACACGATCTGGTAACTGTCGTTTGTGCTGACTGGTGGATCAAATTCCTGCGCAGGATCGCGACGCTATCTCCT CTTGGTCCACGGTTCGAAGCTTCGAAACACCCAGTTTGCTACAGATAGGTGAATCATGAGGCCGCTCCTCGGGCG ACAGCTGCTGCTGGCCGTGGCTACGCTTCCACTGGCCATGGGAGAGCGGTTGCTCATGTCCAAGTCGCTCAACGC CTGCCAGCAGGAAAGCAGCTTCACGGCGTCACTCTTCCATGTCGTCTATACGCCAAGCAATAGTTCAGCTACAGT GGAGATGTCCATCACTTCATCGATAAGGGGCAAAGTCGTGTTTGACCTAGCGATTTCTGCCTATGGTTACCAATT CCTTCGCCGTACCGTCGACCCATGTGATATGGATCTTGCTGGCCTCTGTCCGATGGTCGCCGGGAAAACTTCGTT TCAGTTCAACCTTCCCGTCGATAAAAAAAATGCCGATCAGATACCCAGCATTGCATATAACATACCAGACCTGGA TGCTGCCGTCCGGGTTTACGTCAACCGAACGTCAGCCGATGCGGGTTCACCTGGCATTAGCGTGGCATGCCTCGA GGCTGCCATCTCAAACGGAAGGACTGTCAACCTGCTCGGTGTCAAGTGGGCTACTGCCGTTACTGCGGGCTTGGC CCTTCTATCATCCGCTGTTGTCAACGGGCTTGGACACTTTAATGCAGCTGCTCACGTTGCCGCAAACTCGCTATC CCTATTTAGTTATTTCCAGGCCCAGGCTATCATTGGTCTTGCAAGTGTTCGCCTCCCCCCTATCGTTCAAGCCTG GACTCTCAACTTTCAGTGGTCTATGGGCATCATTCGTATCAACTTCATACGGAACCTGTGCACTTGGTATCAAAG ATCTACCGGGGGCGCTCCATCCCAGGTCTTTAATGCGTTGAGTACTGTTTCGGTTCAAGTCGCTAAGCGATCTCT GGCTGGCGCAAAGCAACCCTTCAAACGAGGCGACATCACCATAGGCACGGGGGCTTATATCGTATATGGCATCCA GCGCGTGGCGTTTCAGTCAAATATCGAATCCACTAACCTATTCATGACGGGCCTGATATGTTTTTACATCTTAAT CATAGGTACCATTTTGGCTGTCGCCGCTTTCAGGGGAGTATGCGGGCTCTGCGCCCGGCAGAACTGGACGAACAA ATTCCTCGAGTTTCGCAACGGCTGGCGGACTATCCTCAAGGGGATTCTTCTCCGTTTAGCTCTTATCGCCTACCC GCAGATGAGCATTCTCTGCCTTTGGGAATTCACCCAGGTCGACTCGCCCGCTGAAGTTGTTCTTGCCGTGTTCGG CTTCTTCAGTCTAACTCTAACCCTATTCTGGGGGGCGAGTAGGCTTATTTGTATCGCCCGTCGATCTGTTTCTCT GCATAGAAACCCAGCCTATATCTTGTTTGCCGATCCGAAGGTCTTGAATAAGTGGGGATTTCTTTACATCCAGTT TCGTGCTTCTGCCTACTATTTTATCTTTCCTACTCTAGGCTACATCTTGGCCAAGTCAATGTTGATCGCTTTCGG ACAACATGGCAGTGGCGGCATCGCCCAGGCCGTTGGACTTGTTATCATCGAAGCGGCCGCCTTGATATCTGCGTC GGTTATGCGGCCGTGGATGGATAAGAGCACCAACTCTTTCAACATCGCCATCTGCGCGGTCAATTTCTTCAACGC TATTTGCCTCATGGTATTTACGAATGTTCTCGGGGCACCTACTCTAATAGTCGGCATTTTCAGTATTATTCTTTT CATTGTCAACGCCGCTTTCTCACTAACTCTACTTATCATGCTCATAATATCGACAACAATTACAGTCTTCCGGAA GGACCCGGACGCCCGCTATCAGATTATGGCCGACGATCGCGCCTCGTTTGTCAAGTCAATGACACAGCTGACGGC AACGAACATAGAACTCGAGGCCCTGGCTGCTACTGCACGGGGCCAGGAAGGCAGAAGCTCGCGCGCCGACGAGGA GAACGAGGCGCTGCATCAGGATGGTCGCCATCGCATGGCATATCGTAAGATGCATTCGGAATCGCCGAGCCTCTG CAATCGATCTGGATCTTCGCTGGCCTATTGA

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