Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1561
Gene name
Locationscaffold_156:17369..18877
Strand-
Gene length (bp)1508
Transcript length (bp)1038
Coding sequence length (bp)1035
Protein length (aa) 345

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1561
MFSDLSSIFWWLVRVAWEIPPPSSVASVYLYSSPRGLGDPKTLAPLMPTTSIVGRPIQARLRRAVLFPLLDEFLN
GGGLVTVVRLALVAEGSLESFERLLMRSHDLIERGLCGFGDGFVDGLVDGAFHGFIDRFGLGVHQIALRVDKCRS
ICRLMTGVAEVLDDETQWSQRRCHLFLYRLLHRFLNGLADIIDIQPPCQILSAGTRRVRGLPKRQVHGARAAETS
LSRRSIGCCRHREAAFCLQLLHGPLEARSPSIAIPHIVGQVLAHSGRCFGRQCAIQTSLSHNRSLSGFGGGKPSP
HKTSASFGPQPLSSMLARSARFAFDEVRGYMIASGRPDLLANVLY
Coding >Ophio5|1561
ATGTTTTCCGACCTCAGTTCAATTTTCTGGTGGTTGGTCCGCGTCGCTTGGGAAATTCCGCCTCCCTCTTCTGTA
GCCAGTGTTTATTTGTATTCTTCTCCACGCGGCCTTGGCGATCCCAAAACTCTTGCGCCTCTCATGCCGACTACC
TCCATTGTAGGACGACCGATTCAAGCTCGGCTCAGACGCGCTGTCTTGTTTCCGCTGCTCGATGAATTCCTGAAC
GGTGGCGGCCTGGTAACCGTCGTGAGACTTGCTCTGGTAGCTGAAGGAAGCCTGGAAAGCTTCGAGCGACTTCTG
ATGCGCAGCCACGACCTGATTGAGCGCGGACTGTGTGGCTTTGGTGACGGCTTCGTTGACGGCTTGGTCGACGGC
GCTTTTCACGGTTTTATCGATAGATTTGGTTTGGGAGTTCACCAGATTGCTCTGAGAGTCGACAAGTGTAGGTCG
ATCTGCCGGCTCATGACCGGCGTCGCTGAGGTCCTTGACGATGAGACGCAGTGGTCCCAGCGCCGCTGCCACCTG
TTTCTCTACCGCCTCCTCCACCGCTTCCTCAACGGCCTCGCGGATATCATCGACATCCAGCCGCCCTGCCAGATT
CTCAGCGCCGGCACTCGTCGCGTCCGAGGATTGCCGAAGCGTCAGGTCCACGGTGCCCGAGCCGCCGAGACCTCT
CTGAGCCGTCGGAGCATTGGATGCTGCCGCCACAGAGAGGCGGCTTTCTGCCTTCAACTCCTGCATGGCCCGCTC
GAAGCCCGGAGTCCAAGCATCGCTATTCCGCACATTGTCGGGCAGGTCCTTGCCCACAGCGGGCGCTGCTTCGGC
CGCCAATGCGCTATTCAAACGAGCCTGAGCCACAACCGATCTCTGAGTGGTTTCGGAGGCGGCAAGCCCTCTCCT
CATAAAACGAGTGCCTCCTTCGGGCCGCAACCTCTTAGTAGCATGCTGGCCCGATCTGCGAGGTTCGCCTTTGAC
GAAGTGCGCGGCTACATGATAGCTTCTGGCCGACCGGATCTCTTGGCTAACGTACTTTAT
Transcript >Ophio5|1561
ATGTTTTCCGACCTCAGTTCAATTTTCTGGTGGTTGGTCCGCGTCGCTTGGGAAATTCCGCCTCCCTCTTCTGTA
GCCAGTGTTTATTTGTATTCTTCTCCACGCGGCCTTGGCGATCCCAAAACTCTTGCGCCTCTCATGCCGACTACC
TCCATTGTAGGACGACCGATTCAAGCTCGGCTCAGACGCGCTGTCTTGTTTCCGCTGCTCGATGAATTCCTGAAC
GGTGGCGGCCTGGTAACCGTCGTGAGACTTGCTCTGGTAGCTGAAGGAAGCCTGGAAAGCTTCGAGCGACTTCTG
ATGCGCAGCCACGACCTGATTGAGCGCGGACTGTGTGGCTTTGGTGACGGCTTCGTTGACGGCTTGGTCGACGGC
GCTTTTCACGGTTTTATCGATAGATTTGGTTTGGGAGTTCACCAGATTGCTCTGAGAGTCGACAAGTGTAGGTCG
ATCTGCCGGCTCATGACCGGCGTCGCTGAGGTCCTTGACGATGAGACGCAGTGGTCCCAGCGCCGCTGCCACCTG
TTTCTCTACCGCCTCCTCCACCGCTTCCTCAACGGCCTCGCGGATATCATCGACATCCAGCCGCCCTGCCAGATT
CTCAGCGCCGGCACTCGTCGCGTCCGAGGATTGCCGAAGCGTCAGGTCCACGGTGCCCGAGCCGCCGAGACCTCT
CTGAGCCGTCGGAGCATTGGATGCTGCCGCCACAGAGAGGCGGCTTTCTGCCTTCAACTCCTGCATGGCCCGCTC
GAAGCCCGGAGTCCAAGCATCGCTATTCCGCACATTGTCGGGCAGGTCCTTGCCCACAGCGGGCGCTGCTTCGGC
CGCCAATGCGCTATTCAAACGAGCCTGAGCCACAACCGATCTCTGAGTGGTTTCGGAGGCGGCAAGCCCTCTCCT
CATAAAACGAGTGCCTCCTTCGGGCCGCAACCTCTTAGTAGCATGCTGGCCCGATCTGCGAGGTTCGCCTTTGAC
GAAGTGCGCGGCTACATGATAGCTTCTGGCCGACCGGATCTCTTGGCTAACGTACTTTATTGA
Gene >Ophio5|1561
ATGTTTTCCGACCTCGTCTCGATTGTTCCAGGACGAGCCTGAACTTCTTCATCTCTAGTAGTGTCCATAAAATGC
CGTATTTGAGTACAAACGGTATTGACGAGCGAGCTTGTCTGTGGAGCTAAGAAGTCAAGTGCTACAGAGTTCAAT
TTTCTGGTGGTTGGTCCGCGTCGCTTGGGAAATTCCGCCTCCCTCTTCTGTAGCCAGTGTTTATTTGTATGTACG
TGCATCATTATCGCATCTTCGTTTCTTCTATGTATTATTCCCTGCCTCTTATCCGACTCATCAGTCTTCTCCACG
CGGCCTTGGCGATCCCAAAACTCTTGCGCCTCTCATGCCGACTACCTCCATTGTAGGACGACCGATTCAAGCTCG
GCTCAGACGCGCTGTCTTGTTTCCGCTGCTCGATGAATTCCTGAACGGTGGCGGCCTGGTAACCGTCGTGAGACT
TGCTCTGGTAGCTGAAGGAAGCCTGGAAAGCTTCGAGCGACTTCTGATGCGCAGCCACGACCTGATTGAGCGCGG
ACTGTGTGGCTTTGGTGACGGCTTCGTTGACGGCTTGGTCGACGGCGCTTTTCACGGTTTTATCGATAGAGTTGG
GCAAGTTGACGATGACTTGCGATAGATGGCTGACGAGCTTGCACGTCACGGCAAGGTTGTCGTTGGCTGACTGGT
TGATCTTCGTATGGGCGTCCACCAGTTTGGTTTGGGAGTTCACCAGATTGCTCTGAGAGTCGACAAGGTTGGTCT
GGGCTCTCAATTGAGCACTGGCCAAATCAGAGTGCTGAAGGATGTCGCGGTAGTGTAGGTCGATCTGCCGGCTCA
TGACGTCGTTTTGCTCTTTCAGATCCGAGTTCTCGTGAACCGCTTCTTCAGCGGCGTCGCTGAGGTCCTTGACGA
TGAGACGCAGTGGTCCCAGCGCCGCTGCCACCTGTTTCTCTACCGCCTCCTCCACCGCTTCCTCAACGGCCTCGC
GGATATCATCGACATCCAGCCGCCCTGCCAGATTCTCAGCGCCGGCACTCGTCGCGTCCGAGGATTGCCGAAGCG
TCAGGTCCACGGTGCCCGAGCCGCCGAGACCTCTCTGAGCCGTCGGAGCATTGGATGCTGCCGCCACAGAGAGGC
GGCTTTCTGCCTTCAACTCCTGCATGGCCCGCTCGAAGCCCGGAGTCCAAGCATCGCTATTCCGCACATTGTCGG
GCAGGTCCTTGCCCACAGCGGGCGCTGCTTCGGCCGCCAATGCGCTATTCAAACGAGCCTGAGCCACAACCGATC
TCTGAGTGGTTTCGGAGGCGGCAAGCCCTCTCCTCATAAAACGAGTGCCTCCTTCGGGCCGCAACCTCTTAGTAG
CATGCTGGCCCGATCTGCGAGGTTCGCCTTTGACGAAGTGCGCGGCTGTAAGGAGATAGCCGTCGCCGCCATTGG
AGCCCTGACCGGCCGCTGACGTCGTCTTGATAGACATGATAGCTTCTGGCCGACCGGATCTCTTGGCTAACGTAC
TTTATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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