Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1557
Gene name
Locationscaffold_156:10713..11934
Strand+
Gene length (bp)1221
Transcript length (bp)882
Coding sequence length (bp)879
Protein length (aa) 293

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1557
MSVGLLSRALCRSAFGFLCLPARLCIRRPKVGPPTDPLHVAPLNLASINWEQVACDPVLTQPIPNGHAARMRFFR
FRKSIDKQCAQSRSSASGSSHLVTSSGGSEHATAAVLKREPAVQLSPRFQCPPTPAVSNASPNLNNIANGFNSPF
MESCADLAAAPTASNAWPDFNAMPSLSDFPCWEPRNFPLIKSPADATAQAFKPDCYDGPSSFERRYMEAEGDQSL
FNMLETIVDENRQHIKVELDQTQPAAEGGQQVRNGKVLAPFDSQSRRTSSEEENFMEDPSIHPLPPKT
Coding >Ophio5|1557
ATGAGCGTCGGCCTTTTGTCTCGAGCTCTGTGTCGGTCGGCCTTTGGTTTTCTCTGCCTGCCGGCCCGTCTGTGC
ATCCGACGCCCAAAGGTAGGGCCACCTACAGACCCTCTACACGTCGCACCCTTGAACTTGGCAAGTATCAACTGG
GAGCAGGTTGCTTGCGATCCCGTCCTGACGCAACCCATTCCCAACGGACACGCCGCTAGGATGCGATTCTTTCGC
TTCAGGAAAAGCATCGACAAGCAGTGTGCGCAAAGTCGCTCCAGCGCCAGCGGCAGTTCTCATCTCGTCACGTCC
AGCGGTGGCTCGGAGCACGCGACCGCCGCAGTTCTGAAACGAGAACCGGCCGTCCAACTCTCGCCTCGCTTTCAG
TGCCCGCCTACTCCAGCCGTCTCGAACGCGTCGCCCAACCTCAATAATATCGCCAACGGGTTCAACTCTCCATTC
ATGGAGAGTTGCGCCGACTTGGCTGCAGCCCCAACCGCCTCGAACGCGTGGCCCGATTTCAATGCAATGCCGAGC
CTATCCGATTTTCCGTGCTGGGAGCCTCGCAACTTCCCCCTGATCAAGTCCCCAGCCGACGCCACCGCCCAGGCC
TTCAAACCCGACTGCTACGACGGCCCCAGCAGTTTCGAGCGTCGATACATGGAAGCTGAGGGCGACCAATCGCTG
TTCAACATGTTGGAGACCATTGTCGACGAGAACAGGCAGCACATAAAAGTTGAGCTCGATCAGACTCAACCCGCC
GCCGAGGGTGGCCAGCAAGTCCGGAACGGCAAAGTGTTGGCACCATTCGATTCACAATCAAGGCGAACCAGCTCC
GAAGAAGAGAATTTCATGGAGGACCCTTCGATACACCCTTTGCCGCCGAAGACC
Transcript >Ophio5|1557
ATGAGCGTCGGCCTTTTGTCTCGAGCTCTGTGTCGGTCGGCCTTTGGTTTTCTCTGCCTGCCGGCCCGTCTGTGC
ATCCGACGCCCAAAGGTAGGGCCACCTACAGACCCTCTACACGTCGCACCCTTGAACTTGGCAAGTATCAACTGG
GAGCAGGTTGCTTGCGATCCCGTCCTGACGCAACCCATTCCCAACGGACACGCCGCTAGGATGCGATTCTTTCGC
TTCAGGAAAAGCATCGACAAGCAGTGTGCGCAAAGTCGCTCCAGCGCCAGCGGCAGTTCTCATCTCGTCACGTCC
AGCGGTGGCTCGGAGCACGCGACCGCCGCAGTTCTGAAACGAGAACCGGCCGTCCAACTCTCGCCTCGCTTTCAG
TGCCCGCCTACTCCAGCCGTCTCGAACGCGTCGCCCAACCTCAATAATATCGCCAACGGGTTCAACTCTCCATTC
ATGGAGAGTTGCGCCGACTTGGCTGCAGCCCCAACCGCCTCGAACGCGTGGCCCGATTTCAATGCAATGCCGAGC
CTATCCGATTTTCCGTGCTGGGAGCCTCGCAACTTCCCCCTGATCAAGTCCCCAGCCGACGCCACCGCCCAGGCC
TTCAAACCCGACTGCTACGACGGCCCCAGCAGTTTCGAGCGTCGATACATGGAAGCTGAGGGCGACCAATCGCTG
TTCAACATGTTGGAGACCATTGTCGACGAGAACAGGCAGCACATAAAAGTTGAGCTCGATCAGACTCAACCCGCC
GCCGAGGGTGGCCAGCAAGTCCGGAACGGCAAAGTGTTGGCACCATTCGATTCACAATCAAGGCGAACCAGCTCC
GAAGAAGAGAATTTCATGGAGGACCCTTCGATACACCCTTTGCCGCCGAAGACCTGA
Gene >Ophio5|1557
ATGAGCGTCGGCCTTTTGTCTCGAGCTCTGTGTCGGTCGGCCTTTGGTTTTCTCTGCCTGCCGGCCCGTCTGTGC
ATCCGACGCCCAAAGGTGCGAATCTCTGCCTCTCCCCATCTTTCTCTGTCGCGCCCCCCTTTTCTCCTCTCAACT
AACTCACCTCATACCTTAGGTAGGGCCACCTACAGACCCTCTACACGTCGCACCCGTCCTGTCTCGAATCTCTCA
ACCCTTTTCGATTTTTGTCCTGGCATCTTTCGGCTTCGAATCCCCTTCGCTTCGGTACCGTCGCCATGACGCCAC
ACGGGAAAAACGAGACGGCCATCTTCTTGTACGCCATACTGAAGCAGTTGAACTTGGCAAGTGTGAGGCGTCGGT
GTCAAACACAGACGTTGGGGGCTTTTGGTCGCTGACACTCTCTTCGCAGATCAACTGGGAGCAGGTTGCTTGCGA
TCCCGTCCTGACGCAACCCATTCCCAACGGACACGCCGCTAGGATGCGATTCTTTCGCTTCAGGAAAAGCATCGA
CAAGCAGTGTGCGCAAAGTCGCTCCAGCGCCAGCGGCAGTTCTCATCTCGTCACGTCCAGCGGTGGCTCGGAGCA
CGCGACCGCCGCAGTTCTGAAACGAGAACCGGCCGTCCAACTCTCGCCTCGCTTTCAGGTACGAAATATACGGAC
AAGATGTTCTTGTCGTTGCTGACCGCGTCGTCTTCGCAGTGCCCGCCTACTCCAGCCGTCTCGAACGCGTCGCCC
AACCTCAATAATATCGCCAACGGGTTCAACTCTCCATTCATGGAGAGTTGCGCCGACTTGGCTGCAGCCCCAACC
GCCTCGAACGCGTGGCCCGATTTCAATGCAATGCCGAGCCTATCCGATTTTCCGTGCTGGGAGCCTCGCAACTTC
CCCCTGATCAAGTCCCCAGCCGACGCCACCGCCCAGGCCTTCAAACCCGACTGCTACGACGGCCCCAGCAGTTTC
GAGCGTCGATACATGGAAGCTGAGGGCGACCAATCGCTGTTCAACATGTTGGAGACCATTGTCGACGAGAACAGG
CAGCACATAAAAGTTGAGCTCGATCAGACTCAACCCGCCGCCGAGGGTGGCCAGCAAGTCCGGAACGGCAAAGTG
TTGGCACCATTCGATTCACAATCAAGGCGAACCAGCTCCGAAGAAGAGAATTTCATGGAGGACCCTTCGATACAC
CCTTTGCCGCCGAAGACCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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