© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|1546 |
| Gene name | |
| Location | scaffold_155:30037..32460 |
| Strand | + |
| Gene length (bp) | 2423 |
| Transcript length (bp) | 1776 |
| Coding sequence length (bp) | 1773 |
| Protein length (aa) | 591 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00018 | SH3_1 | SH3 domain | 1.0E-05 | 58 | 93 |
| PF00018 | SH3_1 | SH3 domain | 4.2E-06 | 162 | 202 |
| PF00787 | PX | PX domain | 4.0E-08 | 352 | 438 |
| PF00564 | PB1 | PB1 domain | 8.6E-06 | 513 | 584 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40996|SCD2_SCHPO | Protein scd2/ral3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=scd2 PE=3 SV=1 | 19 | 589 | 1.0E-89 |
| sp|P29366|BEM1_YEAST | Bud emergence protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BEM1 PE=1 SV=1 | 27 | 545 | 8.0E-67 |
| sp|O89032|SPD2A_MOUSE | SH3 and PX domain-containing protein 2A OS=Mus musculus GN=Sh3pxd2a PE=1 SV=2 | 342 | 442 | 9.0E-14 |
| sp|Q5TCZ1|SPD2A_HUMAN | SH3 and PX domain-containing protein 2A OS=Homo sapiens GN=SH3PXD2A PE=1 SV=1 | 342 | 442 | 1.0E-13 |
| sp|A1X283|SPD2B_HUMAN | SH3 and PX domain-containing protein 2B OS=Homo sapiens GN=SH3PXD2B PE=1 SV=3 | 342 | 442 | 1.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40996|SCD2_SCHPO | Protein scd2/ral3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=scd2 PE=3 SV=1 | 19 | 589 | 1.0E-89 |
| sp|P29366|BEM1_YEAST | Bud emergence protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BEM1 PE=1 SV=1 | 27 | 545 | 8.0E-67 |
| sp|O89032|SPD2A_MOUSE | SH3 and PX domain-containing protein 2A OS=Mus musculus GN=Sh3pxd2a PE=1 SV=2 | 342 | 442 | 9.0E-14 |
| sp|Q5TCZ1|SPD2A_HUMAN | SH3 and PX domain-containing protein 2A OS=Homo sapiens GN=SH3PXD2A PE=1 SV=1 | 342 | 442 | 1.0E-13 |
| sp|A1X283|SPD2B_HUMAN | SH3 and PX domain-containing protein 2B OS=Homo sapiens GN=SH3PXD2B PE=1 SV=3 | 342 | 442 | 1.0E-12 |
| sp|A2AAY5|SPD2B_MOUSE | SH3 and PX domain-containing protein 2B OS=Mus musculus GN=Sh3pxd2b PE=1 SV=1 | 342 | 442 | 1.0E-12 |
| sp|Q1LYG0|SPD2A_DANRE | SH3 and PX domain-containing protein 2A OS=Danio rerio GN=sh3pxd2a PE=3 SV=2 | 342 | 442 | 2.0E-10 |
| sp|O77774|NCF1_BOVIN | Neutrophil cytosol factor 1 OS=Bos taurus GN=NCF1 PE=2 SV=1 | 340 | 457 | 3.0E-09 |
| sp|F1M707|NCF1_RAT | Neutrophil cytosolic factor 1 OS=Rattus norvegicus GN=Ncf1 PE=1 SV=2 | 340 | 455 | 8.0E-09 |
| sp|Q09014|NCF1_MOUSE | Neutrophil cytosol factor 1 OS=Mus musculus GN=Ncf1 PE=1 SV=3 | 340 | 455 | 1.0E-07 |
| sp|P14598|NCF1_HUMAN | Neutrophil cytosol factor 1 OS=Homo sapiens GN=NCF1 PE=1 SV=3 | 340 | 445 | 4.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0035091 | phosphatidylinositol binding | Yes |
| GO:0005488 | binding | No |
| GO:0005543 | phospholipid binding | No |
| GO:0003674 | molecular_function | No |
| GO:0008289 | lipid binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1546 MKALRRSMKGEKHKQTPSIGSKSAVAIVPPKKVIRATDDYQPDEALMQNFAKAGVQILSFSKGDFFHVIGREDDA HWYEACNPALPDARGLVPVTYFQVLGRTERDSADGGRQPMAKNPDHDSGYGETAIQQSAAPAQRNSKSSRTAGTV YAKVRHSFTAHPTRPDELSAEKDENLIIIAQSNHEWVVAKPIMRLGGPGLIPIDFIYVYDEVPLGTDASNSPVPV ADPLEALRKAGVPSVEEWKRMAAQYKNSSITLGKFDGSKSPGGQQPSLEQGMGRLSLQPDARQSSGNDSHHTGEY HSSPGAGPSPVSQDAYDSRSASQVYAPIWARIPRYCYAEQKYWFVIDTELEDGRCWELSRYYQDFYDFQIALLAE FPVEAGNTGTQKRTLPYMPGPVSYVTDAITEGRLYNLDAYVKNLLNQPPHISRCDLVKLFFAPREGDYEIDSHVN GDDEYRLSEGSHQSSVESHANATSRRSSPNNGNGYGYSGSSATPRQGNGAMQSSAQSGQPAAMKIKVRFKDEVFA MRVPKDVQFQDLHDKIRDRVKAVPGEQIQLYYQDELSGVLQSLLSDNHLDYALQRHEKLTLYVEVV |
| Coding | >Ophio5|1546 ATGAAGGCCCTCCGTCGGTCTATGAAGGGCGAAAAGCACAAGCAAACACCTTCGATAGGCTCCAAATCCGCCGTC GCCATCGTTCCACCTAAAAAGGTCATACGAGCGACCGACGACTACCAGCCCGATGAGGCTTTGATGCAGAACTTC GCCAAAGCAGGCGTCCAGATTCTCAGCTTCTCCAAGGGCGACTTCTTCCACGTCATTGGCCGCGAAGACGATGCG CATTGGTACGAGGCATGCAATCCCGCCCTTCCCGATGCCCGCGGGCTCGTGCCCGTCACCTACTTTCAGGTGCTG GGCCGCACCGAACGCGACAGCGCCGACGGCGGCAGGCAGCCCATGGCCAAGAATCCCGACCACGACTCTGGCTAT GGTGAAACTGCCATACAGCAATCTGCCGCACCCGCTCAGCGCAACTCCAAATCCTCCAGGACGGCCGGCACAGTC TATGCCAAAGTTCGCCACAGCTTCACCGCCCACCCGACTCGTCCGGACGAACTCTCGGCAGAAAAGGACGAGAAC CTTATCATCATCGCCCAGTCCAACCACGAATGGGTCGTTGCGAAGCCTATAATGCGGCTGGGAGGTCCCGGCCTG ATCCCGATAGATTTCATTTACGTCTATGACGAAGTTCCGCTTGGTACCGACGCCTCCAACTCTCCCGTACCCGTC GCGGATCCTCTTGAAGCCCTGCGGAAGGCTGGTGTGCCGAGCGTCGAAGAGTGGAAGCGCATGGCTGCCCAGTAC AAGAACAGCAGTATCACTCTCGGAAAGTTCGACGGCAGCAAATCTCCCGGCGGCCAGCAGCCCTCCCTCGAACAG GGAATGGGCCGCCTGAGTCTCCAGCCAGACGCGCGGCAAAGCAGCGGGAATGATTCTCATCATACCGGCGAGTAT CACAGCTCACCGGGTGCGGGCCCATCGCCGGTTTCTCAGGATGCGTACGATTCTCGATCGGCCTCGCAGGTCTAT GCACCGATCTGGGCGAGAATACCGCGGTACTGTTACGCCGAGCAGAAGTATTGGTTCGTCATCGACACGGAGCTC GAGGATGGTCGGTGCTGGGAGCTGTCCAGATACTATCAGGACTTCTACGACTTCCAAATTGCCCTCCTCGCCGAG TTCCCCGTCGAGGCCGGCAACACGGGCACCCAGAAGCGAACCTTGCCCTACATGCCGGGACCTGTGAGCTACGTC ACCGACGCCATCACCGAGGGCCGCCTCTACAACCTGGACGCCTACGTCAAAAACCTGCTCAATCAACCGCCGCAC ATCTCTCGGTGCGACCTGGTCAAGCTCTTCTTCGCCCCTCGAGAGGGCGACTACGAAATCGATTCCCACGTGAAT GGTGACGACGAGTATCGACTGTCCGAGGGCTCGCATCAGTCGTCTGTTGAGTCGCACGCCAACGCCACGTCGCGA CGGTCTTCTCCCAACAACGGTAATGGCTACGGCTACTCGGGCTCGTCCGCCACACCGAGGCAGGGCAACGGCGCA ATGCAGAGTTCAGCCCAGTCGGGACAGCCGGCCGCGATGAAGATCAAGGTGCGCTTCAAGGACGAGGTGTTCGCC ATGAGGGTGCCGAAAGACGTACAGTTCCAAGATTTGCACGACAAGATCCGAGATCGAGTCAAGGCGGTTCCGGGC GAGCAGATTCAGCTATACTACCAGGACGAGCTGTCAGGGGTGCTGCAGAGCTTGTTGAGCGACAATCACCTCGAT TACGCGCTGCAACGACACGAAAAGCTCACGTTATATGTCGAAGTCGTC |
| Transcript | >Ophio5|1546 ATGAAGGCCCTCCGTCGGTCTATGAAGGGCGAAAAGCACAAGCAAACACCTTCGATAGGCTCCAAATCCGCCGTC GCCATCGTTCCACCTAAAAAGGTCATACGAGCGACCGACGACTACCAGCCCGATGAGGCTTTGATGCAGAACTTC GCCAAAGCAGGCGTCCAGATTCTCAGCTTCTCCAAGGGCGACTTCTTCCACGTCATTGGCCGCGAAGACGATGCG CATTGGTACGAGGCATGCAATCCCGCCCTTCCCGATGCCCGCGGGCTCGTGCCCGTCACCTACTTTCAGGTGCTG GGCCGCACCGAACGCGACAGCGCCGACGGCGGCAGGCAGCCCATGGCCAAGAATCCCGACCACGACTCTGGCTAT GGTGAAACTGCCATACAGCAATCTGCCGCACCCGCTCAGCGCAACTCCAAATCCTCCAGGACGGCCGGCACAGTC TATGCCAAAGTTCGCCACAGCTTCACCGCCCACCCGACTCGTCCGGACGAACTCTCGGCAGAAAAGGACGAGAAC CTTATCATCATCGCCCAGTCCAACCACGAATGGGTCGTTGCGAAGCCTATAATGCGGCTGGGAGGTCCCGGCCTG ATCCCGATAGATTTCATTTACGTCTATGACGAAGTTCCGCTTGGTACCGACGCCTCCAACTCTCCCGTACCCGTC GCGGATCCTCTTGAAGCCCTGCGGAAGGCTGGTGTGCCGAGCGTCGAAGAGTGGAAGCGCATGGCTGCCCAGTAC AAGAACAGCAGTATCACTCTCGGAAAGTTCGACGGCAGCAAATCTCCCGGCGGCCAGCAGCCCTCCCTCGAACAG GGAATGGGCCGCCTGAGTCTCCAGCCAGACGCGCGGCAAAGCAGCGGGAATGATTCTCATCATACCGGCGAGTAT CACAGCTCACCGGGTGCGGGCCCATCGCCGGTTTCTCAGGATGCGTACGATTCTCGATCGGCCTCGCAGGTCTAT GCACCGATCTGGGCGAGAATACCGCGGTACTGTTACGCCGAGCAGAAGTATTGGTTCGTCATCGACACGGAGCTC GAGGATGGTCGGTGCTGGGAGCTGTCCAGATACTATCAGGACTTCTACGACTTCCAAATTGCCCTCCTCGCCGAG TTCCCCGTCGAGGCCGGCAACACGGGCACCCAGAAGCGAACCTTGCCCTACATGCCGGGACCTGTGAGCTACGTC ACCGACGCCATCACCGAGGGCCGCCTCTACAACCTGGACGCCTACGTCAAAAACCTGCTCAATCAACCGCCGCAC ATCTCTCGGTGCGACCTGGTCAAGCTCTTCTTCGCCCCTCGAGAGGGCGACTACGAAATCGATTCCCACGTGAAT GGTGACGACGAGTATCGACTGTCCGAGGGCTCGCATCAGTCGTCTGTTGAGTCGCACGCCAACGCCACGTCGCGA CGGTCTTCTCCCAACAACGGTAATGGCTACGGCTACTCGGGCTCGTCCGCCACACCGAGGCAGGGCAACGGCGCA ATGCAGAGTTCAGCCCAGTCGGGACAGCCGGCCGCGATGAAGATCAAGGTGCGCTTCAAGGACGAGGTGTTCGCC ATGAGGGTGCCGAAAGACGTACAGTTCCAAGATTTGCACGACAAGATCCGAGATCGAGTCAAGGCGGTTCCGGGC GAGCAGATTCAGCTATACTACCAGGACGAGCTGTCAGGGGTGCTGCAGAGCTTGTTGAGCGACAATCACCTCGAT TACGCGCTGCAACGACACGAAAAGCTCACGTTATATGTCGAAGTCGTCTGA |
| Gene | >Ophio5|1546 ATGAAGGTTCGTCGCTGCCCCGTCGCCTTTCCCCTCCCCCCTTTCCTCTCCTTTCGTCTCTTTTGGCCCTCTCAT CAGTCACTCTTTCCTGCCTTGCCGCTTCGTCTGCCATCACCCGTGGCGAGCCGACGCCTACCTGCATCCTGCCCT TTCTCCCCTTTCAGCCGTCCTCCCCTCCTGGCCGTCTCTGTCTTTGCCCCTACAGATTTTTTTGGGTTACCCATC CTGAGCGTGACCGATGGCGGTACCCTTCCATGTCCCCTCACCCTCTTTTCCCTGTCCCGCATCGCCGAAACAAAC TTCCGCTTCGAGTCCCGAGCCCGTCGGGCCCCTATTTCAGCCCTGAGGAGCTAACGCCATGGACTTGATCAAGGC CCTCCGTCGGTCTATGAAGGGCGAAAAGCACAAGCAAACACCTTCGATAGGCTCCAAATCCGCCGTCGCCATCGT TCCACCTAAAAAGGTTGGTTTTCGCCCTACTCCGCCCTGTCCCAACCGTCTGCCACGGCTTGAGACAACCGCGCT CGCCGCATCGGCCCACCGTCGACGCGCCGTGACGCGGTTACTCGAGGGACGGGCAGCTGGACACTGCGAGAGGCC GCTGCTGATGCGGACATGCCTTGACAGGTCATACGAGCGACCGACGACTACCAGCCCGATGAGGCTTTGATGCAG AACTTCGCCAAAGCAGGCGTCCAGATTCTCAGCTTCTCCAAGGGCGACTTCTTCCACGTCATTGGCCGCGAAGAC GATGCGCATTGGTACGAGGCATGCAATCCCGCCCTTCCCGATGCCCGCGGGCTCGTGCCCGTCACCTACTTTCAG GTGCTGGGCCGCACCGAACGCGACAGCGCCGACGGCGGCAGGCAGCCCATGGCCAAGAATCCCGACCACGACTCT GGCTATGGTGAAACTGCCATACAGCAATCTGCCGCACCCGCTCAGCGCAACTCCAAATCCTCCAGGACGGCCGGC ACAGTCTATGCCAAAGTTCGCCACAGCTTCACCGCCCACCCGACTCGTCCGGACGAACTCTCGGCAGAAAAGGAC GAGAACCTTATCATCATCGCCCAGTCCAACCACGAATGGGTCGTTGCGAAGCCTATAATGCGGCTGGGAGGTCCC GGCCTGATCCCGATAGATTTCATTTACGTCTATGACGAAGTTCCGCTTGGTACCGACGCCTCCAACTCTCCCGTA CCCGTCGCGGATCCTCTTGAAGCCCTGCGGAAGGCTGGTGTGCCGAGCGTCGAAGAGTGGAAGCGCATGGCTGCC CAGTACAAGAACAGCAGTATCACTCTCGGAAAGTTCGACGGCAGCAAATCTCCCGGCGGCCAGCAGCCCTCCCTC GAACAGGGAATGGGCCGCCTGAGTCTCCAGCCAGACGCGCGGCAAAGCAGCGGGAATGATTCTCATGTAAGTCGC CGGCGAGCTATTCCCTCGGCCGCGAAACTGACGTCTCGGTGGCGCCAGCATACCGGCGAGTATCACAGCTCACCG GGTGCGGGCCCATCGCCGGTTTCTCAGGATGCGTACGATTCTCGATCGGCCTCGCAGGTCTATGCACCGATCTGG GCGAGAATACCGCGGTACTGTTACGCCGAGCAGAAGTATTGGTTCGTCATCGACACGGAGCTCGAGGATGGTCGG TGCTGGGAGCTGTCCAGATACTATCAGGACTTCTACGACTTCCAAATTGCCCTCCTCGCCGAGTTCCCCGTCGAG GCCGGCAACACGGGCACCCAGAAGCGAACCTTGCCCTACATGCCGGGACCTGTGAGCTACGTCACCGACGCCATC ACCGAGGGCCGCCTCTACAACCTGGACGCCTACGTCAAAAACCTGCTCAATCAACCGCCGCACATCTCTCGGTGC GACCTGGTCAAGCTCTTCTTCGCCCCTCGAGAGGGCGACTACGAAATCGATTCCCACGTGAATGGTGACGACGAG TATCGACTGTCCGAGGGCTCGCATCAGTCGTCTGTTGAGTCGCACGCCAACGCCACGTCGCGACGGTCTTCTCCC AACAACGGTAATGGCTACGGCTACTCGGGCTCGTCCGCCACACCGAGGCAGGGCAACGGCGCAATGCAGAGTACG TCCCCGATGGCGCATATGTACCCCCTGGCGCACTTTGGCGCTGACCGTGAATAGGTTCAGCCCAGTCGGGACAGC CGGCCGCGATGAAGATCAAGGTGCGCTTCAAGGACGAGGTGTTCGCCATGAGGGTGCCGAAAGACGTACAGTTCC AAGATTTGCACGACAAGATCCGAGATCGAGTCAAGGCGGTTCCGGGCGAGCAGATTCAGCTATACTACCAGGACG AGCTGTCAGGGGTGCTGCAGAGCTTGTTGAGCGACAATCACCTCGATTACGCGCTGCAACGACACGAAAAGCTCA CGTTATATGTCGAAGTCGTCTGA |