Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1532
Gene name
Locationscaffold_155:223..950
Strand+
Gene length (bp)727
Transcript length (bp)669
Coding sequence length (bp)666
Protein length (aa) 222

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02301 HORMA HORMA domain 6.2E-06 18 163

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q0E7J8|REV7_SCHPO DNA polymerase zeta processivity subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rev7 PE=3 SV=1 12 220 2.0E-26
sp|Q568H3|MD2L2_DANRE Mitotic spindle assembly checkpoint protein MAD2B OS=Danio rerio GN=mad2l2 PE=2 SV=1 18 220 2.0E-10
sp|Q4KWZ6|MD2L2_CHICK Mitotic spindle assembly checkpoint protein MAD2B OS=Gallus gallus GN=MAD2L2 PE=1 SV=1 15 219 8.0E-10
sp|Q9Z1B5|MD2L1_MOUSE Mitotic spindle assembly checkpoint protein MAD2A OS=Mus musculus GN=Mad2l1 PE=1 SV=2 18 188 9.0E-10
sp|Q2KIP7|MD2L2_BOVIN Mitotic spindle assembly checkpoint protein MAD2B OS=Bos taurus GN=MAD2L2 PE=2 SV=1 18 219 1.0E-09
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Swissprot ID Swissprot Description Start End E-value
sp|Q0E7J8|REV7_SCHPO DNA polymerase zeta processivity subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rev7 PE=3 SV=1 12 220 2.0E-26
sp|Q568H3|MD2L2_DANRE Mitotic spindle assembly checkpoint protein MAD2B OS=Danio rerio GN=mad2l2 PE=2 SV=1 18 220 2.0E-10
sp|Q4KWZ6|MD2L2_CHICK Mitotic spindle assembly checkpoint protein MAD2B OS=Gallus gallus GN=MAD2L2 PE=1 SV=1 15 219 8.0E-10
sp|Q9Z1B5|MD2L1_MOUSE Mitotic spindle assembly checkpoint protein MAD2A OS=Mus musculus GN=Mad2l1 PE=1 SV=2 18 188 9.0E-10
sp|Q2KIP7|MD2L2_BOVIN Mitotic spindle assembly checkpoint protein MAD2B OS=Bos taurus GN=MAD2L2 PE=2 SV=1 18 219 1.0E-09
sp|Q8QFR4|MD2L2_XENLA Mitotic spindle assembly checkpoint protein MAD2B OS=Xenopus laevis GN=mad2l2 PE=1 SV=1 18 219 1.0E-09
sp|Q94FL5|REV7_ARATH DNA polymerase zeta processivity subunit OS=Arabidopsis thaliana GN=REV7 PE=2 SV=1 5 219 3.0E-09
sp|Q28H85|MD2L2_XENTR Mitotic spindle assembly checkpoint protein MAD2B OS=Xenopus tropicalis GN=mad2l2 PE=2 SV=1 18 219 3.0E-09
sp|Q556Y9|MD2L1_DICDI Mitotic spindle assembly checkpoint protein MAD2A OS=Dictyostelium discoideum GN=mad2l1-1 PE=3 SV=1 18 209 3.0E-09
sp|D3Z8D9|MD2L2_RAT Mitotic spindle assembly checkpoint protein MAD2B OS=Rattus norvegicus GN=Mad2l2 PE=2 SV=1 15 219 3.0E-09
sp|Q9D752|MD2L2_MOUSE Mitotic spindle assembly checkpoint protein MAD2B OS=Mus musculus GN=Mad2l2 PE=1 SV=2 15 219 3.0E-09
sp|Q9UI95|MD2L2_HUMAN Mitotic spindle assembly checkpoint protein MAD2B OS=Homo sapiens GN=MAD2L2 PE=1 SV=2 18 219 8.0E-09
sp|Q9LU93|MAD2_ARATH Mitotic spindle checkpoint protein MAD2 OS=Arabidopsis thaliana GN=MAD2 PE=1 SV=1 8 188 8.0E-08
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal|Nuclear export signal 0.6548 0.7712 0.0229 0.015 0.2145 0.0012 0.069 0.4008 0.2148 0.0025

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 10 32 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup5915
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|51
Ophiocordyceps australis map64 (Brazil) OphauB2|5914
Ophiocordyceps camponoti-floridani Ophcf2|03082
Ophiocordyceps camponoti-rufipedis Ophun1|5355
Ophiocordyceps kimflemingae Ophio5|1532 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1532
MQVPSSQATALISSFGAFLTIAIHTILYHRSLYPRSSFLLARAYNLPVRQSRHPAVCGWVRDAVAAVTLELRRAA
VRRVVLSVHEPGRHRLVLERWVFDLDGFPAESLPPPPGEMMGLPLEAAEEAGVVNWDDVHQSWRAALHALALRAD
MLPPTPEDCSFALALELRLDAKPPTRHPQLWIPSEPQLQPPSGPALPTGSTVPVRSVQAGPMFFECWLERAE
Coding >Ophio5|1532
ATGCAAGTCCCCAGCTCCCAAGCGACAGCCCTCATCTCCTCCTTCGGCGCCTTCCTCACCATCGCCATCCACACC
ATCCTCTACCATCGCAGCCTCTACCCACGCAGCAGCTTCCTGCTAGCGCGCGCCTACAATCTCCCCGTGCGCCAA
TCGCGTCATCCGGCCGTATGCGGCTGGGTTCGCGACGCCGTCGCCGCCGTGACGCTTGAGCTTCGTCGCGCCGCC
GTCCGTCGGGTCGTGCTCTCGGTTCATGAACCGGGTCGTCATAGGCTTGTGCTCGAGCGTTGGGTCTTTGATCTT
GATGGCTTCCCCGCCGAATCCCTTCCCCCCCCCCCTGGCGAGATGATGGGTCTTCCCCTCGAGGCTGCTGAGGAA
GCTGGGGTCGTGAATTGGGACGATGTTCATCAGTCGTGGAGGGCTGCCTTGCATGCTTTGGCTCTGAGGGCCGAC
ATGTTGCCCCCCACGCCCGAGGACTGCTCTTTTGCTCTGGCGCTGGAGTTGCGCCTCGATGCGAAGCCTCCGACA
CGACATCCTCAGCTTTGGATCCCCTCGGAGCCGCAGCTTCAACCCCCATCGGGCCCTGCTCTCCCCACCGGCTCG
ACCGTTCCCGTTCGCTCCGTCCAGGCTGGACCCATGTTCTTCGAGTGCTGGCTTGAGCGGGCCGAG
Transcript >Ophio5|1532
ATGCAAGTCCCCAGCTCCCAAGCGACAGCCCTCATCTCCTCCTTCGGCGCCTTCCTCACCATCGCCATCCACACC
ATCCTCTACCATCGCAGCCTCTACCCACGCAGCAGCTTCCTGCTAGCGCGCGCCTACAATCTCCCCGTGCGCCAA
TCGCGTCATCCGGCCGTATGCGGCTGGGTTCGCGACGCCGTCGCCGCCGTGACGCTTGAGCTTCGTCGCGCCGCC
GTCCGTCGGGTCGTGCTCTCGGTTCATGAACCGGGTCGTCATAGGCTTGTGCTCGAGCGTTGGGTCTTTGATCTT
GATGGCTTCCCCGCCGAATCCCTTCCCCCCCCCCCTGGCGAGATGATGGGTCTTCCCCTCGAGGCTGCTGAGGAA
GCTGGGGTCGTGAATTGGGACGATGTTCATCAGTCGTGGAGGGCTGCCTTGCATGCTTTGGCTCTGAGGGCCGAC
ATGTTGCCCCCCACGCCCGAGGACTGCTCTTTTGCTCTGGCGCTGGAGTTGCGCCTCGATGCGAAGCCTCCGACA
CGACATCCTCAGCTTTGGATCCCCTCGGAGCCGCAGCTTCAACCCCCATCGGGCCCTGCTCTCCCCACCGGCTCG
ACCGTTCCCGTTCGCTCCGTCCAGGCTGGACCCATGTTCTTCGAGTGCTGGCTTGAGCGGGCCGAGTGA
Gene >Ophio5|1532
ATGCAAGTCCCCAGCTCCCAAGCGACAGCCCTCATCTCCTCCTTCGGCGCCTTCCTCACCATCGCCATCCACACC
ATCCTCTACCATCGCAGCCTCTACCCACGCAGCAGCTTCCTGCTAGCGCGCGCCTACAATCTCCCCGTGCGCCAA
TCGCGTCATCCGGCCGTATGCGGCTGGGTTCGCGACGCCGTCGCCGCCGTGACGCTTGAGCTTCGTCGCGCCGCC
GTCCGTCGGGTCGTGCTCTCGGTTCATGAACCGGGTCGTCATAGGCTTGTGCTCGAGCGTTGGGTCTTTGATCTT
GATGGCTTCCCCGCCGAATCCCTTCCCCCCCCCCCTGGCGAGATGATGGGTCTTCCCCTCGAGGCTGCTGAGGAA
GCTGGGGTCGTGAATTGGGACGATGTTCATCAGTCGTGGAGGGCTGCCTTGCATGCTTTGGCTCTGAGGGCCGAC
ATGTTGCCCCCCACGCCCGAGGACTGCTCTTTTGCTCTGGCGCTGGAGTTGCGCCTCGATGCGAAGCCTCCGACA
CGAGTGAGTCCGCTGCCTACCTTCTTGAATTCTTCTTTTTTTTTTTCTCAATCCCCTTCAGCATCCTCAGCTTTG
GATCCCCTCGGAGCCGCAGCTTCAACCCCCATCGGGCCCTGCTCTCCCCACCGGCTCGACCGTTCCCGTTCGCTC
CGTCCAGGCTGGACCCATGTTCTTCGAGTGCTGGCTTGAGCGGGCCGAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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