© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|151 |
| Gene name | |
| Location | scaffold_1010:482..2304 |
| Strand | + |
| Gene length (bp) | 1822 |
| Transcript length (bp) | 1671 |
| Coding sequence length (bp) | 1668 |
| Protein length (aa) | 556 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q84W55|IP5PF_ARATH | Type II inositol polyphosphate 5-phosphatase 15 OS=Arabidopsis thaliana GN=IP5P15 PE=1 SV=2 | 174 | 464 | 8.0E-13 |
| sp|O14306|YE8A_SCHPO | Probable inositol polyphosphate 5-phosphatase C9G1.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9G1.10c PE=1 SV=2 | 69 | 447 | 1.0E-11 |
| sp|Q9FUR2|IP5P2_ARATH | Type I inositol polyphosphate 5-phosphatase 2 OS=Arabidopsis thaliana GN=IP5P2 PE=1 SV=2 | 136 | 470 | 6.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 58 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 534 | 553 | 19 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 38.28 | 20.75 | 55.82 |
| CcL | In ants, during behavior modification | 27.35 | 13.86 | 40.85 |
| CcD | In ants, recently dead | 34.33 | 18.38 | 50.29 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.170958 | no |
| SC16a | CcD | 0.673903 | no |
| CcL | CcD | 0.369394 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|151 MATCDARVSTPLSGGEDLLTSSSSSSSSSSSSAAATVDLLVLTFNCAKQLISPGVFGRHLRWAMGRNAGGLPEVV VLSLQEVAPLSKAFVGEYFLDGYLERFGEAVNGAAVRKKKKKEKKKKGGEATTTTTGSTTETTDTPPYTLVKARN VGYTAMMLFARHPARLSAVLEAEMGFGAADMGNKGAVGMRTLYSDPDGKTTELTFVATHLAAMEWNLPRRNANWA AIMRGLTFANPEQVFARDDEGNVDGDEMDEDEADDAPLLPRGDHQGEDEGDGQQHARLRRRLHDLSVYKPSSHLF VAGDLNYRIATTPPPPGAALPSLDRRSHHHFGAFLPLDQLTRERRAGRTLHGLVEAPVEFPPTYKYVPLGDKAHD NEDDDGGFCDERQHYEDEDGDEDEDKDVVRWRFASHRWPAWTDRILYLDVPPWVRAQNGPRIRVRAYDALPVVRT SDHRAVFLRVDVPLVGPRELAPPSSLSSDVTSPPSWAHDATATDPRLRLPVEIDPEAWARRRAARQKEKLVGWTM LLWSSSEGAWVLLASLVVAAGGAYWFYYSGV |
| Coding | >Ophio5|151 ATGGCGACGTGCGACGCTCGAGTTTCCACTCCCCTGTCAGGCGGCGAGGACCTGCTGACGTCGTCGTCGTCGTCG TCGTCGTCGTCGTCGTCGTCGGCGGCGGCGACGGTCGACCTGCTGGTTCTCACCTTCAACTGCGCGAAGCAGCTC ATCAGCCCGGGGGTGTTTGGTCGGCATCTTCGGTGGGCGATGGGAAGGAATGCGGGGGGGTTGCCGGAGGTGGTT GTGCTGTCTTTGCAGGAGGTGGCGCCGCTTAGCAAGGCGTTTGTGGGTGAGTATTTCTTGGATGGGTATTTGGAG AGGTTTGGGGAGGCAGTTAATGGTGCGGCGGTGAGGAAAAAGAAAAAGAAGGAGAAGAAGAAGAAGGGGGGGGAG GCGACGACAACGACGACGGGAAGCACGACAGAAACCACCGACACCCCCCCATATACGCTCGTCAAAGCCCGCAAC GTCGGCTACACAGCCATGATGCTCTTTGCGCGGCACCCGGCGCGGCTGAGCGCCGTGCTCGAGGCCGAGATGGGC TTTGGCGCGGCGGATATGGGCAACAAGGGCGCCGTCGGCATGCGAACCCTCTACTCAGACCCTGACGGCAAGACG ACGGAGCTGACGTTTGTGGCGACGCACCTGGCGGCCATGGAGTGGAACCTGCCGCGGCGGAATGCGAATTGGGCA GCTATTATGCGTGGACTGACGTTTGCGAATCCGGAGCAGGTTTTTGCCCGAGATGATGAGGGCAACGTTGATGGT GATGAGATGGACGAGGACGAGGCCGACGATGCCCCTCTGCTACCGCGCGGTGACCACCAAGGAGAAGACGAGGGC GACGGCCAGCAGCACGCACGTCTGCGCCGACGGCTTCACGACCTCTCAGTCTACAAGCCCTCGTCGCACCTCTTC GTCGCCGGCGACCTCAACTACCGTATCGCCACGACGCCGCCTCCGCCCGGCGCGGCGCTGCCGAGCCTCGACCGG CGATCGCATCATCACTTCGGAGCCTTCTTGCCGTTGGATCAGCTGACGCGCGAGAGGCGGGCCGGCAGGACGCTG CACGGGTTGGTGGAAGCGCCGGTGGAATTTCCGCCGACATACAAGTATGTGCCTCTGGGGGACAAGGCACATGAT AACGAGGACGACGATGGTGGCTTTTGCGACGAGAGGCAGCATTACGAGGACGAGGACGGGGACGAGGATGAAGAC AAGGACGTGGTTCGTTGGCGTTTCGCCTCTCATCGCTGGCCGGCCTGGACGGATCGAATTCTCTACCTCGACGTG CCGCCGTGGGTACGGGCGCAGAACGGTCCGCGGATCCGAGTGCGCGCATACGACGCCCTGCCCGTGGTGCGGACG AGCGATCACCGGGCCGTCTTCCTACGCGTCGACGTGCCCCTCGTCGGACCGAGGGAACTCGCGCCTCCGTCCTCA CTCTCGTCTGACGTGACGTCGCCGCCATCTTGGGCGCACGATGCCACGGCCACGGACCCTCGTCTCCGGCTCCCC GTCGAGATCGACCCGGAGGCCTGGGCGCGACGAAGGGCGGCGCGGCAGAAGGAGAAGCTGGTCGGTTGGACGATG CTCCTCTGGAGTTCGAGCGAGGGGGCTTGGGTGCTACTCGCCTCGTTGGTAGTTGCCGCGGGAGGGGCGTATTGG TTTTACTATTCCGGGGTT |
| Transcript | >Ophio5|151 ATGGCGACGTGCGACGCTCGAGTTTCCACTCCCCTGTCAGGCGGCGAGGACCTGCTGACGTCGTCGTCGTCGTCG TCGTCGTCGTCGTCGTCGTCGGCGGCGGCGACGGTCGACCTGCTGGTTCTCACCTTCAACTGCGCGAAGCAGCTC ATCAGCCCGGGGGTGTTTGGTCGGCATCTTCGGTGGGCGATGGGAAGGAATGCGGGGGGGTTGCCGGAGGTGGTT GTGCTGTCTTTGCAGGAGGTGGCGCCGCTTAGCAAGGCGTTTGTGGGTGAGTATTTCTTGGATGGGTATTTGGAG AGGTTTGGGGAGGCAGTTAATGGTGCGGCGGTGAGGAAAAAGAAAAAGAAGGAGAAGAAGAAGAAGGGGGGGGAG GCGACGACAACGACGACGGGAAGCACGACAGAAACCACCGACACCCCCCCATATACGCTCGTCAAAGCCCGCAAC GTCGGCTACACAGCCATGATGCTCTTTGCGCGGCACCCGGCGCGGCTGAGCGCCGTGCTCGAGGCCGAGATGGGC TTTGGCGCGGCGGATATGGGCAACAAGGGCGCCGTCGGCATGCGAACCCTCTACTCAGACCCTGACGGCAAGACG ACGGAGCTGACGTTTGTGGCGACGCACCTGGCGGCCATGGAGTGGAACCTGCCGCGGCGGAATGCGAATTGGGCA GCTATTATGCGTGGACTGACGTTTGCGAATCCGGAGCAGGTTTTTGCCCGAGATGATGAGGGCAACGTTGATGGT GATGAGATGGACGAGGACGAGGCCGACGATGCCCCTCTGCTACCGCGCGGTGACCACCAAGGAGAAGACGAGGGC GACGGCCAGCAGCACGCACGTCTGCGCCGACGGCTTCACGACCTCTCAGTCTACAAGCCCTCGTCGCACCTCTTC GTCGCCGGCGACCTCAACTACCGTATCGCCACGACGCCGCCTCCGCCCGGCGCGGCGCTGCCGAGCCTCGACCGG CGATCGCATCATCACTTCGGAGCCTTCTTGCCGTTGGATCAGCTGACGCGCGAGAGGCGGGCCGGCAGGACGCTG CACGGGTTGGTGGAAGCGCCGGTGGAATTTCCGCCGACATACAAGTATGTGCCTCTGGGGGACAAGGCACATGAT AACGAGGACGACGATGGTGGCTTTTGCGACGAGAGGCAGCATTACGAGGACGAGGACGGGGACGAGGATGAAGAC AAGGACGTGGTTCGTTGGCGTTTCGCCTCTCATCGCTGGCCGGCCTGGACGGATCGAATTCTCTACCTCGACGTG CCGCCGTGGGTACGGGCGCAGAACGGTCCGCGGATCCGAGTGCGCGCATACGACGCCCTGCCCGTGGTGCGGACG AGCGATCACCGGGCCGTCTTCCTACGCGTCGACGTGCCCCTCGTCGGACCGAGGGAACTCGCGCCTCCGTCCTCA CTCTCGTCTGACGTGACGTCGCCGCCATCTTGGGCGCACGATGCCACGGCCACGGACCCTCGTCTCCGGCTCCCC GTCGAGATCGACCCGGAGGCCTGGGCGCGACGAAGGGCGGCGCGGCAGAAGGAGAAGCTGGTCGGTTGGACGATG CTCCTCTGGAGTTCGAGCGAGGGGGCTTGGGTGCTACTCGCCTCGTTGGTAGTTGCCGCGGGAGGGGCGTATTGG TTTTACTATTCCGGGGTTTGA |
| Gene | >Ophio5|151 ATGGCGACGTGCGACGCTCGAGTTTCCACTCCCCTGTCAGGCGGCGAGGACCTGCTGACGTCGTCGTCGTCGTCG TCGTCGTCGTCGTCGTCGTCGGCGGCGGCGACGGTCGACCTGCTGGTTCTCACCTTCAACTGCGCGAAGCAGCTC ATCAGCCCGGGGGTGTTTGGTCGGCATCTTCGGTGGGCGATGGGAAGGAATGCGGGGGGGTTGCCGGAGGTGGTT GTGCTGTGAGAAAACCCATTTCCCCCCCTCCACCCTCCTCGAAATACAAAGTGGTGAGAAGTGAAAAAAAAATAA AAATAAAAAAAATAAGATAAGGGAGATTTCTTATTTACTTTGATTGGTTGGTTGCTGATGAGTCGAGCGTGAGTG AAATAGGTCTTTGCAGGAGGTGGCGCCGCTTAGCAAGGCGTTTGTGGGTGAGTATTTCTTGGATGGGTATTTGGA GAGGTTTGGGGAGGCAGTTAATGGTGCGGCGGTGAGGAAAAAGAAAAAGAAGGAGAAGAAGAAGAAGGGGGGGGA GGCGACGACAACGACGACGGGAAGCACGACAGAAACCACCGACACCCCCCCATATACGCTCGTCAAAGCCCGCAA CGTCGGCTACACAGCCATGATGCTCTTTGCGCGGCACCCGGCGCGGCTGAGCGCCGTGCTCGAGGCCGAGATGGG CTTTGGCGCGGCGGATATGGGCAACAAGGGCGCCGTCGGCATGCGAACCCTCTACTCAGACCCTGACGGCAAGAC GACGGAGCTGACGTTTGTGGCGACGCACCTGGCGGCCATGGAGTGGAACCTGCCGCGGCGGAATGCGAATTGGGC AGCTATTATGCGTGGACTGACGTTTGCGAATCCGGAGCAGGTTTTTGCCCGAGATGATGAGGGCAACGTTGATGG TGATGAGATGGACGAGGACGAGGCCGACGATGCCCCTCTGCTACCGCGCGGTGACCACCAAGGAGAAGACGAGGG CGACGGCCAGCAGCACGCACGTCTGCGCCGACGGCTTCACGACCTCTCAGTCTACAAGCCCTCGTCGCACCTCTT CGTCGCCGGCGACCTCAACTACCGTATCGCCACGACGCCGCCTCCGCCCGGCGCGGCGCTGCCGAGCCTCGACCG GCGATCGCATCATCACTTCGGAGCCTTCTTGCCGTTGGATCAGCTGACGCGCGAGAGGCGGGCCGGCAGGACGCT GCACGGGTTGGTGGAAGCGCCGGTGGAATTTCCGCCGACATACAAGTATGTGCCTCTGGGGGACAAGGCACATGA TAACGAGGACGACGATGGTGGCTTTTGCGACGAGAGGCAGCATTACGAGGACGAGGACGGGGACGAGGATGAAGA CAAGGACGTGGTTCGTTGGCGTTTCGCCTCTCATCGCTGGCCGGCCTGGACGGATCGAATTCTCTACCTCGACGT GCCGCCGTGGGTACGGGCGCAGAACGGTCCGCGGATCCGAGTGCGCGCATACGACGCCCTGCCCGTGGTGCGGAC GAGCGATCACCGGGCCGTCTTCCTACGCGTCGACGTGCCCCTCGTCGGACCGAGGGAACTCGCGCCTCCGTCCTC ACTCTCGTCTGACGTGACGTCGCCGCCATCTTGGGCGCACGATGCCACGGCCACGGACCCTCGTCTCCGGCTCCC CGTCGAGATCGACCCGGAGGCCTGGGCGCGACGAAGGGCGGCGCGGCAGAAGGAGAAGCTGGTCGGTTGGACGAT GCTCCTCTGGAGTTCGAGCGAGGGGGCTTGGGTGCTACTCGCCTCGTTGGTAGTTGCCGCGGGAGGGGCGTATTG GTTTTACTATTCCGGGGTTTGA |