Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1488
Gene name
Locationscaffold_152:14922..15516
Strand+
Gene length (bp)594
Transcript length (bp)594
Coding sequence length (bp)591
Protein length (aa) 197

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10306 FLILHELTA Hypothetical protein FLILHELTA 1.5E-28 32 116

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 56 78 22
2 172 194 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1488
MLRRRPLLLSRPLPAPRLLPKTRLSSTSRIDRLASKLPARWQKHATRLRNAPVSHVAAFLILHEITAVVPLLALF
ALFHYTAVVPVEWVAGRFAAYTDEGVARAERYFRRKDWFGFRAEEGEAKGKEEGDNPGQDHTKLAIKRWERGDGG
YQILVEVALAYAVTKALLPLRIVASLLATPWFARVITSIGSSLFRKP
Coding >Ophio5|1488
ATGCTCCGCCGCCGTCCCCTCCTCCTCAGCAGGCCTCTTCCAGCCCCTCGCCTCCTCCCAAAGACACGCCTCTCG
TCAACGTCACGCATCGACCGACTGGCCTCGAAGCTCCCAGCTCGATGGCAAAAGCACGCGACGCGTCTACGCAAC
GCGCCCGTGTCCCACGTCGCCGCCTTTCTCATCCTGCACGAGATCACCGCCGTCGTTCCGCTCTTGGCGCTCTTC
GCCTTGTTTCATTATACTGCTGTCGTGCCGGTTGAGTGGGTGGCTGGCAGGTTCGCTGCGTATACGGATGAGGGT
GTTGCCAGGGCTGAGCGTTACTTTCGCCGCAAGGACTGGTTTGGCTTTCGTGCGGAAGAGGGAGAGGCAAAGGGG
AAGGAAGAAGGAGACAATCCTGGCCAAGACCATACGAAATTGGCCATCAAGAGGTGGGAGAGAGGCGATGGTGGT
TATCAGATACTCGTTGAAGTGGCACTGGCGTACGCTGTGACCAAGGCGCTGCTACCGCTTCGCATCGTTGCTAGT
CTGTTGGCTACGCCTTGGTTCGCCCGCGTCATCACGAGCATTGGCAGCTCACTGTTTCGCAAGCCA
Transcript >Ophio5|1488
ATGCTCCGCCGCCGTCCCCTCCTCCTCAGCAGGCCTCTTCCAGCCCCTCGCCTCCTCCCAAAGACACGCCTCTCG
TCAACGTCACGCATCGACCGACTGGCCTCGAAGCTCCCAGCTCGATGGCAAAAGCACGCGACGCGTCTACGCAAC
GCGCCCGTGTCCCACGTCGCCGCCTTTCTCATCCTGCACGAGATCACCGCCGTCGTTCCGCTCTTGGCGCTCTTC
GCCTTGTTTCATTATACTGCTGTCGTGCCGGTTGAGTGGGTGGCTGGCAGGTTCGCTGCGTATACGGATGAGGGT
GTTGCCAGGGCTGAGCGTTACTTTCGCCGCAAGGACTGGTTTGGCTTTCGTGCGGAAGAGGGAGAGGCAAAGGGG
AAGGAAGAAGGAGACAATCCTGGCCAAGACCATACGAAATTGGCCATCAAGAGGTGGGAGAGAGGCGATGGTGGT
TATCAGATACTCGTTGAAGTGGCACTGGCGTACGCTGTGACCAAGGCGCTGCTACCGCTTCGCATCGTTGCTAGT
CTGTTGGCTACGCCTTGGTTCGCCCGCGTCATCACGAGCATTGGCAGCTCACTGTTTCGCAAGCCATGA
Gene >Ophio5|1488
ATGCTCCGCCGCCGTCCCCTCCTCCTCAGCAGGCCTCTTCCAGCCCCTCGCCTCCTCCCAAAGACACGCCTCTCG
TCAACGTCACGCATCGACCGACTGGCCTCGAAGCTCCCAGCTCGATGGCAAAAGCACGCGACGCGTCTACGCAAC
GCGCCCGTGTCCCACGTCGCCGCCTTTCTCATCCTGCACGAGATCACCGCCGTCGTTCCGCTCTTGGCGCTCTTC
GCCTTGTTTCATTATACTGCTGTCGTGCCGGTTGAGTGGGTGGCTGGCAGGTTCGCTGCGTATACGGATGAGGGT
GTTGCCAGGGCTGAGCGTTACTTTCGCCGCAAGGACTGGTTTGGCTTTCGTGCGGAAGAGGGAGAGGCAAAGGGG
AAGGAAGAAGGAGACAATCCTGGCCAAGACCATACGAAATTGGCCATCAAGAGGTGGGAGAGAGGCGATGGTGGT
TATCAGATACTCGTTGAAGTGGCACTGGCGTACGCTGTGACCAAGGCGCTGCTACCGCTTCGCATCGTTGCTAGT
CTGTTGGCTACGCCTTGGTTCGCCCGCGTCATCACGAGCATTGGCAGCTCACTGTTTCGCAAGCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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