Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1433
Gene name
Locationscaffold_15:19009..20188
Strand-
Gene length (bp)1179
Transcript length (bp)1179
Coding sequence length (bp)1176
Protein length (aa) 392

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 235 257 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1433
MVPSPAVLLLVMVTLASPTSSHTLPTLGLDSSPSNKAPTPTRKAGLRRRDGGTVCGYIGGDAALPATCIAGSHCA
LDVAHGVVGCCPDQGPCSTGVFTGCVDANSGLQTVADPYLFTCTAGHVCYRNVFDGGYYQFGCGTASRLATSVAT
SPPEGMDALALMRVTLAMTESVTPLATPLNVASLTSTASSSFSSSETTTTGSSGVGKAADDPSSTPPSGPASAPP
RDPASPRTGAIVGGTIGGIAAMTALLALVVFLCRRHRRRPLKEALINSNNNNNNNNSSVNNERKPLAEDGIRPIP
SSNPEPYHVNSAGKPSLVITSATPPRFANGGLDPHRIPLATGPLAFDSPRPAPRPDVEAETEASSAYPGPRRNGS
GALWQQNRRQRRNLAWI
Coding >Ophio5|1433
ATGGTACCATCACCAGCTGTACTGCTGCTGGTGATGGTCACCTTGGCAAGCCCAACGTCCAGCCACACGTTACCA
ACACTCGGACTCGACTCGTCCCCCTCGAACAAAGCACCGACACCGACGAGAAAAGCAGGGCTACGAAGACGAGAT
GGCGGCACCGTCTGCGGATACATAGGAGGAGACGCGGCTCTGCCGGCAACATGCATCGCCGGATCGCATTGCGCT
CTCGACGTGGCGCACGGCGTGGTGGGATGTTGTCCCGATCAAGGCCCTTGCTCGACGGGTGTCTTCACCGGTTGT
GTTGATGCCAATAGCGGCTTGCAGACGGTGGCTGATCCCTATCTTTTCACCTGTACTGCTGGACACGTCTGCTAC
CGAAATGTTTTTGATGGTGGTTATTATCAGTTTGGCTGTGGTACGGCTTCGCGGCTTGCTACGTCGGTTGCTACT
TCGCCGCCTGAGGGTATGGATGCTTTGGCTCTTATGCGTGTTACGTTGGCTATGACGGAGTCGGTTACACCCTTG
GCTACGCCTCTGAACGTTGCTTCGCTCACTTCCACCGCCTCCTCCTCCTTCTCTTCTTCTGAAACGACAACAACG
GGCAGTAGTGGCGTCGGCAAAGCTGCTGATGATCCTTCTTCGACACCCCCCTCCGGCCCCGCCTCGGCCCCGCCA
CGGGACCCCGCCTCTCCCCGAACCGGAGCCATTGTTGGTGGTACCATCGGCGGCATCGCAGCTATGACCGCTCTA
CTCGCTCTTGTCGTCTTCCTGTGCCGCCGTCATCGCCGTCGACCGCTCAAGGAGGCGCTCATCAACAGCAACAAC
AACAACAACAACAACAACAGCAGCGTCAACAACGAGCGCAAACCCCTAGCCGAAGACGGTATCCGACCCATTCCA
TCCTCCAATCCGGAGCCTTACCATGTCAACTCAGCCGGAAAACCGTCTCTTGTCATCACGTCGGCCACTCCACCA
CGCTTCGCTAACGGTGGCCTCGATCCCCATCGCATCCCGTTGGCGACCGGCCCTTTGGCTTTTGACTCTCCGAGG
CCGGCGCCGAGGCCCGATGTCGAGGCTGAGACGGAAGCCAGCTCGGCGTATCCCGGACCGCGCAGGAATGGCAGC
GGAGCGTTATGGCAGCAGAATCGGAGACAGCGGCGTAATCTGGCGTGGATA
Transcript >Ophio5|1433
ATGGTACCATCACCAGCTGTACTGCTGCTGGTGATGGTCACCTTGGCAAGCCCAACGTCCAGCCACACGTTACCA
ACACTCGGACTCGACTCGTCCCCCTCGAACAAAGCACCGACACCGACGAGAAAAGCAGGGCTACGAAGACGAGAT
GGCGGCACCGTCTGCGGATACATAGGAGGAGACGCGGCTCTGCCGGCAACATGCATCGCCGGATCGCATTGCGCT
CTCGACGTGGCGCACGGCGTGGTGGGATGTTGTCCCGATCAAGGCCCTTGCTCGACGGGTGTCTTCACCGGTTGT
GTTGATGCCAATAGCGGCTTGCAGACGGTGGCTGATCCCTATCTTTTCACCTGTACTGCTGGACACGTCTGCTAC
CGAAATGTTTTTGATGGTGGTTATTATCAGTTTGGCTGTGGTACGGCTTCGCGGCTTGCTACGTCGGTTGCTACT
TCGCCGCCTGAGGGTATGGATGCTTTGGCTCTTATGCGTGTTACGTTGGCTATGACGGAGTCGGTTACACCCTTG
GCTACGCCTCTGAACGTTGCTTCGCTCACTTCCACCGCCTCCTCCTCCTTCTCTTCTTCTGAAACGACAACAACG
GGCAGTAGTGGCGTCGGCAAAGCTGCTGATGATCCTTCTTCGACACCCCCCTCCGGCCCCGCCTCGGCCCCGCCA
CGGGACCCCGCCTCTCCCCGAACCGGAGCCATTGTTGGTGGTACCATCGGCGGCATCGCAGCTATGACCGCTCTA
CTCGCTCTTGTCGTCTTCCTGTGCCGCCGTCATCGCCGTCGACCGCTCAAGGAGGCGCTCATCAACAGCAACAAC
AACAACAACAACAACAACAGCAGCGTCAACAACGAGCGCAAACCCCTAGCCGAAGACGGTATCCGACCCATTCCA
TCCTCCAATCCGGAGCCTTACCATGTCAACTCAGCCGGAAAACCGTCTCTTGTCATCACGTCGGCCACTCCACCA
CGCTTCGCTAACGGTGGCCTCGATCCCCATCGCATCCCGTTGGCGACCGGCCCTTTGGCTTTTGACTCTCCGAGG
CCGGCGCCGAGGCCCGATGTCGAGGCTGAGACGGAAGCCAGCTCGGCGTATCCCGGACCGCGCAGGAATGGCAGC
GGAGCGTTATGGCAGCAGAATCGGAGACAGCGGCGTAATCTGGCGTGGATATGA
Gene >Ophio5|1433
ATGGTACCATCACCAGCTGTACTGCTGCTGGTGATGGTCACCTTGGCAAGCCCAACGTCCAGCCACACGTTACCA
ACACTCGGACTCGACTCGTCCCCCTCGAACAAAGCACCGACACCGACGAGAAAAGCAGGGCTACGAAGACGAGAT
GGCGGCACCGTCTGCGGATACATAGGAGGAGACGCGGCTCTGCCGGCAACATGCATCGCCGGATCGCATTGCGCT
CTCGACGTGGCGCACGGCGTGGTGGGATGTTGTCCCGATCAAGGCCCTTGCTCGACGGGTGTCTTCACCGGTTGT
GTTGATGCCAATAGCGGCTTGCAGACGGTGGCTGATCCCTATCTTTTCACCTGTACTGCTGGACACGTCTGCTAC
CGAAATGTTTTTGATGGTGGTTATTATCAGTTTGGCTGTGGTACGGCTTCGCGGCTTGCTACGTCGGTTGCTACT
TCGCCGCCTGAGGGTATGGATGCTTTGGCTCTTATGCGTGTTACGTTGGCTATGACGGAGTCGGTTACACCCTTG
GCTACGCCTCTGAACGTTGCTTCGCTCACTTCCACCGCCTCCTCCTCCTTCTCTTCTTCTGAAACGACAACAACG
GGCAGTAGTGGCGTCGGCAAAGCTGCTGATGATCCTTCTTCGACACCCCCCTCCGGCCCCGCCTCGGCCCCGCCA
CGGGACCCCGCCTCTCCCCGAACCGGAGCCATTGTTGGTGGTACCATCGGCGGCATCGCAGCTATGACCGCTCTA
CTCGCTCTTGTCGTCTTCCTGTGCCGCCGTCATCGCCGTCGACCGCTCAAGGAGGCGCTCATCAACAGCAACAAC
AACAACAACAACAACAACAGCAGCGTCAACAACGAGCGCAAACCCCTAGCCGAAGACGGTATCCGACCCATTCCA
TCCTCCAATCCGGAGCCTTACCATGTCAACTCAGCCGGAAAACCGTCTCTTGTCATCACGTCGGCCACTCCACCA
CGCTTCGCTAACGGTGGCCTCGATCCCCATCGCATCCCGTTGGCGACCGGCCCTTTGGCTTTTGACTCTCCGAGG
CCGGCGCCGAGGCCCGATGTCGAGGCTGAGACGGAAGCCAGCTCGGCGTATCCCGGACCGCGCAGGAATGGCAGC
GGAGCGTTATGGCAGCAGAATCGGAGACAGCGGCGTAATCTGGCGTGGATATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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