Protein ID | Ophio5|1432 |
Gene name | |
Location | scaffold_15:17500..18319 |
Strand | + |
Gene length (bp) | 819 |
Transcript length (bp) | 819 |
Coding sequence length (bp) | 816 |
Protein length (aa) | 272 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 3062.89 | 848.79 | 5276.99 |
CcL | In ants, during behavior modification | 51.04 | 23.91 | 78.17 |
CcD | In ants, recently dead | 19.30 | 7.21 | 31.39 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.000286 | yes |
SC16a | CcD | 0.000286 | yes |
CcL | CcD | 0.000535 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|1432 MVHKSAIALGVLGIATSVAAKVKPWYEPRWFECMISENSEKCLGTERFCTSLAVTRHFSPEICFNEREPNPNPNH DLKPWRNPGASVECNANAQSEACLGTEAYCSGDEGRKEYGSSDDCFGNHKAKPHVQKPDAQLKPWRQGQRNKGAF DCRVSPNGEACVGTDEFCRGDQGRRQFGTADACFGAHEPKPQAAQATPQPQPQPQPQPQPLPSRPSVVQKPAMAW KERDPKACLFVPNEACLGTEEFCNTEVRGIQGFKTPQECFDAHEPRP |
Coding | >Ophio5|1432 ATGGTTCACAAGTCAGCCATTGCCCTGGGCGTTCTCGGCATCGCCACCAGCGTCGCGGCCAAGGTGAAGCCCTGG TACGAGCCGCGATGGTTCGAATGCATGATCAGCGAGAACTCGGAGAAGTGCCTCGGCACGGAAAGGTTCTGCACC AGCCTGGCCGTGACGAGGCACTTTTCGCCCGAGATATGCTTCAACGAGCGAGAGCCGAACCCGAATCCCAATCAC GACCTTAAGCCGTGGCGCAATCCAGGAGCTTCAGTCGAGTGCAACGCCAACGCGCAAAGTGAAGCTTGCCTCGGC ACAGAAGCCTATTGCTCCGGCGATGAGGGGAGAAAGGAATACGGATCGAGCGACGATTGCTTCGGCAACCACAAA GCCAAGCCTCATGTCCAGAAACCGGATGCTCAGCTGAAACCATGGCGGCAAGGTCAGAGGAACAAGGGTGCTTTC GACTGCCGAGTATCGCCCAATGGCGAAGCCTGCGTCGGCACCGACGAGTTTTGCCGCGGCGACCAGGGACGTCGA CAGTTCGGAACTGCCGATGCCTGCTTTGGCGCGCACGAGCCGAAGCCTCAAGCTGCTCAGGCCACGCCTCAACCT CAGCCTCAGCCTCAGCCTCAGCCTCAGCCGCTTCCCAGTCGGCCAAGTGTGGTGCAGAAGCCGGCTATGGCCTGG AAGGAGCGAGACCCAAAGGCCTGTCTGTTCGTCCCGAACGAGGCCTGTCTCGGCACCGAGGAATTTTGCAACACC GAGGTGCGTGGAATACAAGGCTTCAAGACTCCGCAGGAGTGCTTCGATGCGCATGAGCCCAGACCT |
Transcript | >Ophio5|1432 ATGGTTCACAAGTCAGCCATTGCCCTGGGCGTTCTCGGCATCGCCACCAGCGTCGCGGCCAAGGTGAAGCCCTGG TACGAGCCGCGATGGTTCGAATGCATGATCAGCGAGAACTCGGAGAAGTGCCTCGGCACGGAAAGGTTCTGCACC AGCCTGGCCGTGACGAGGCACTTTTCGCCCGAGATATGCTTCAACGAGCGAGAGCCGAACCCGAATCCCAATCAC GACCTTAAGCCGTGGCGCAATCCAGGAGCTTCAGTCGAGTGCAACGCCAACGCGCAAAGTGAAGCTTGCCTCGGC ACAGAAGCCTATTGCTCCGGCGATGAGGGGAGAAAGGAATACGGATCGAGCGACGATTGCTTCGGCAACCACAAA GCCAAGCCTCATGTCCAGAAACCGGATGCTCAGCTGAAACCATGGCGGCAAGGTCAGAGGAACAAGGGTGCTTTC GACTGCCGAGTATCGCCCAATGGCGAAGCCTGCGTCGGCACCGACGAGTTTTGCCGCGGCGACCAGGGACGTCGA CAGTTCGGAACTGCCGATGCCTGCTTTGGCGCGCACGAGCCGAAGCCTCAAGCTGCTCAGGCCACGCCTCAACCT CAGCCTCAGCCTCAGCCTCAGCCTCAGCCGCTTCCCAGTCGGCCAAGTGTGGTGCAGAAGCCGGCTATGGCCTGG AAGGAGCGAGACCCAAAGGCCTGTCTGTTCGTCCCGAACGAGGCCTGTCTCGGCACCGAGGAATTTTGCAACACC GAGGTGCGTGGAATACAAGGCTTCAAGACTCCGCAGGAGTGCTTCGATGCGCATGAGCCCAGACCTTGA |
Gene | >Ophio5|1432 ATGGTTCACAAGTCAGCCATTGCCCTGGGCGTTCTCGGCATCGCCACCAGCGTCGCGGCCAAGGTGAAGCCCTGG TACGAGCCGCGATGGTTCGAATGCATGATCAGCGAGAACTCGGAGAAGTGCCTCGGCACGGAAAGGTTCTGCACC AGCCTGGCCGTGACGAGGCACTTTTCGCCCGAGATATGCTTCAACGAGCGAGAGCCGAACCCGAATCCCAATCAC GACCTTAAGCCGTGGCGCAATCCAGGAGCTTCAGTCGAGTGCAACGCCAACGCGCAAAGTGAAGCTTGCCTCGGC ACAGAAGCCTATTGCTCCGGCGATGAGGGGAGAAAGGAATACGGATCGAGCGACGATTGCTTCGGCAACCACAAA GCCAAGCCTCATGTCCAGAAACCGGATGCTCAGCTGAAACCATGGCGGCAAGGTCAGAGGAACAAGGGTGCTTTC GACTGCCGAGTATCGCCCAATGGCGAAGCCTGCGTCGGCACCGACGAGTTTTGCCGCGGCGACCAGGGACGTCGA CAGTTCGGAACTGCCGATGCCTGCTTTGGCGCGCACGAGCCGAAGCCTCAAGCTGCTCAGGCCACGCCTCAACCT CAGCCTCAGCCTCAGCCTCAGCCTCAGCCGCTTCCCAGTCGGCCAAGTGTGGTGCAGAAGCCGGCTATGGCCTGG AAGGAGCGAGACCCAAAGGCCTGTCTGTTCGTCCCGAACGAGGCCTGTCTCGGCACCGAGGAATTTTGCAACACC GAGGTGCGTGGAATACAAGGCTTCAAGACTCCGCAGGAGTGCTTCGATGCGCATGAGCCCAGACCTTGA |