Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1411
Gene name
Locationscaffold_149:10185..11635
Strand+
Gene length (bp)1450
Transcript length (bp)1245
Coding sequence length (bp)1242
Protein length (aa) 414

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 63 0.5

Transmembrane Domains

Domain # Start End Length
1 45 62 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1411
MAVSSVPASRESPEYLEAGLLSTGDEDKIRSLAPPPRSMSPLRRLMLAVVLGIFLGFGLSLAKDYVTKPCLSEAA
NVDRVVVVQQRLDSTDLLRRVLHSWFPANLANNLGRSAAGPPVFAGLARRQDDGAGGSNATSRATSSFQPQTSTD
ASSSSASSSADTSSAPVTSSLPSVDTSSATATSSLVGSSSSQALPETSSATSAEPTSLVTAPAITTVSSTPRRQP
TSSFATSSATPEESSSSAAGTSLTNDSTLVATSSSSSAPASLPPSFTSSSSLSTSSVEDSFSSLTTTSPTTTASR
SRFLWQSPSMTMSPGTPTKEESSSPTPTEANRRTVTTGRVSTSSAVRTTWTTTLSDGGVTTLTSTSWVAVVPSET
AAPSSRSREADLQNAAPQMQVEATLFAMVAAFAGAIILI
Coding >Ophio5|1411
ATGGCCGTCTCCTCCGTTCCCGCGAGCCGTGAGAGCCCCGAATATCTCGAAGCTGGGCTGCTGAGCACTGGAGAC
GAGGACAAGATCCGTTCACTTGCACCACCGCCTCGCAGCATGTCGCCCCTGCGGAGGCTGATGCTGGCCGTCGTC
CTTGGCATCTTCCTTGGATTTGGTCTTTCCCTGGCCAAGGATTACGTTACGAAACCGTGTCTCTCTGAAGCTGCC
AACGTTGATCGAGTCGTCGTGGTTCAGCAACGGCTCGACTCGACCGACCTCCTCCGCAGGGTGCTCCATTCTTGG
TTCCCGGCCAACTTGGCCAATAATCTCGGTCGGTCGGCTGCCGGGCCTCCGGTTTTTGCTGGGCTGGCCAGGCGA
CAGGACGATGGTGCGGGCGGAAGCAATGCTACGTCTCGCGCCACGTCCAGCTTCCAGCCCCAGACTTCGACTGAC
GCTTCTTCGTCGTCTGCCTCATCCTCTGCCGACACCTCTTCCGCCCCCGTAACATCGTCTCTGCCTTCTGTCGAC
ACCTCCTCGGCAACCGCCACCTCTTCCCTTGTCGGCTCGTCAAGCAGTCAAGCTCTGCCGGAGACATCGTCTGCC
ACGAGCGCGGAACCGACATCGTTAGTCACGGCCCCGGCTATCACGACCGTCTCCTCCACTCCTCGGCGTCAACCG
ACTTCGTCATTTGCAACGTCGTCTGCGACCCCCGAGGAATCGTCTTCTTCAGCAGCCGGTACGTCCTTGACAAAC
GATTCGACTCTGGTGGCGACGTCCTCGTCCTCCAGTGCTCCAGCCTCTTTGCCTCCTTCTTTCACATCTTCCTCT
TCTCTAAGCACTTCCTCGGTGGAAGACTCTTTTTCATCCTTGACCACTACCTCCCCTACAACGACAGCCTCCAGG
AGCAGGTTCCTATGGCAATCGCCGTCAATGACCATGAGCCCCGGCACGCCGACTAAAGAGGAATCCAGCTCGCCG
ACCCCAACGGAGGCGAATCGCAGGACCGTCACGACGGGACGTGTGTCGACGTCGAGTGCCGTGCGGACGACGTGG
ACGACGACTTTGAGCGACGGGGGCGTTACGACTCTCACGTCGACGTCGTGGGTCGCCGTCGTCCCCTCGGAAACA
GCGGCCCCGTCCAGCCGTTCCAGAGAAGCCGACTTGCAAAACGCTGCGCCACAAATGCAAGTCGAGGCTACACTG
TTCGCAATGGTGGCCGCTTTCGCCGGCGCTATCATACTGATC
Transcript >Ophio5|1411
ATGGCCGTCTCCTCCGTTCCCGCGAGCCGTGAGAGCCCCGAATATCTCGAAGCTGGGCTGCTGAGCACTGGAGAC
GAGGACAAGATCCGTTCACTTGCACCACCGCCTCGCAGCATGTCGCCCCTGCGGAGGCTGATGCTGGCCGTCGTC
CTTGGCATCTTCCTTGGATTTGGTCTTTCCCTGGCCAAGGATTACGTTACGAAACCGTGTCTCTCTGAAGCTGCC
AACGTTGATCGAGTCGTCGTGGTTCAGCAACGGCTCGACTCGACCGACCTCCTCCGCAGGGTGCTCCATTCTTGG
TTCCCGGCCAACTTGGCCAATAATCTCGGTCGGTCGGCTGCCGGGCCTCCGGTTTTTGCTGGGCTGGCCAGGCGA
CAGGACGATGGTGCGGGCGGAAGCAATGCTACGTCTCGCGCCACGTCCAGCTTCCAGCCCCAGACTTCGACTGAC
GCTTCTTCGTCGTCTGCCTCATCCTCTGCCGACACCTCTTCCGCCCCCGTAACATCGTCTCTGCCTTCTGTCGAC
ACCTCCTCGGCAACCGCCACCTCTTCCCTTGTCGGCTCGTCAAGCAGTCAAGCTCTGCCGGAGACATCGTCTGCC
ACGAGCGCGGAACCGACATCGTTAGTCACGGCCCCGGCTATCACGACCGTCTCCTCCACTCCTCGGCGTCAACCG
ACTTCGTCATTTGCAACGTCGTCTGCGACCCCCGAGGAATCGTCTTCTTCAGCAGCCGGTACGTCCTTGACAAAC
GATTCGACTCTGGTGGCGACGTCCTCGTCCTCCAGTGCTCCAGCCTCTTTGCCTCCTTCTTTCACATCTTCCTCT
TCTCTAAGCACTTCCTCGGTGGAAGACTCTTTTTCATCCTTGACCACTACCTCCCCTACAACGACAGCCTCCAGG
AGCAGGTTCCTATGGCAATCGCCGTCAATGACCATGAGCCCCGGCACGCCGACTAAAGAGGAATCCAGCTCGCCG
ACCCCAACGGAGGCGAATCGCAGGACCGTCACGACGGGACGTGTGTCGACGTCGAGTGCCGTGCGGACGACGTGG
ACGACGACTTTGAGCGACGGGGGCGTTACGACTCTCACGTCGACGTCGTGGGTCGCCGTCGTCCCCTCGGAAACA
GCGGCCCCGTCCAGCCGTTCCAGAGAAGCCGACTTGCAAAACGCTGCGCCACAAATGCAAGTCGAGGCTACACTG
TTCGCAATGGTGGCCGCTTTCGCCGGCGCTATCATACTGATCTAG
Gene >Ophio5|1411
ATGGCCGTCTCCTCCGTTCCCGCGAGCCGTGAGAGCCCCGAATATCTCGAAGCTGGGCTGCTGAGCACTGGAGAC
GAGGACAAGATCCGTTCACTTGCACCACCGCCTCGCAGCATGTCGCCCCTGCGGAGGCTGATGCTGGCCGTCGTC
CTTGGCATCTTCCTTGGATTTGGTCTTTCCCTGGCCAAGGATTACGTTACGAAACCGTGTCTCTCTGAAGCTGCC
AACGTTGATCGAGTCGTCGTGGTTCAGCAACGGCTCGACTCGACCGACCTCCTCCGCAGGGTGCTCCATTCTTGG
TTCCCGGCCAACTTGGCCAATAATCTCGGTCGGTCGGCTGCCGGGCCTCCGGTTTTTGCTGGGCTGGCCAGGCGA
CAGGACGATGGTGCGGGCGGAAGCAATGCTACGTCTCGCGCCACGTCCAGCTTCCAGCCCCAGACTTCGACTGAC
GCTTCTTCGTCGTCTGCCTCATCCTCTGCCGACACCTCTTCCGCCCCCGTAACATCGTCTCTGCCTTCTGTCGAC
ACCTCCTCGGCAACCGCCACCTCTTCCCTTGGTACGTGTCATGTTGCTTGTGTCGGCACCTCGTCCGTCCACTGA
CATCATATCTAGTCGGCTCGTCAAGCAGTCAAGCTCTGCCGGAGACATCGTCTGCCACGAGCGCGGAACCGACAT
CGTTAGTCACGGCCCCGGCTATCACGACCGTCTCCTCCACTCCTCGGCGTCAACCGACTTCGTCATTTGCAACGT
CGTCTGCGACCCCCGAGGAATCGTCTTCTTCAGCAGCCGGTACGTCCTTGACAAACGATTCGACTCTGGTGGCGA
CGTCCTCGTCCTCCAGTGCTCCAGCCTCTTTGCCTCCTTCTTTCACATCTTCCTCTTCTCTAAGCACTTCCTCGG
TGGAAGACTCTTTTTCATCCTTGACCACTACCTCCCCTACAACGACAGCCTCCAGGAGCAGGTTCCTATGGCAAT
CGCCGTCAATGACCATGAGCCCCGGCACGCCGACTAAAGGTGACTGCGAGCTGCATGGCCGTTACATACCATCCC
CCATGAGCAGCTCACTATTGCTCGCCGCAAGTGTGGCTGAACGTTGAATCACTACATTTATATCTGGCACCCATA
CTGCTTACCCCCGAGTCTTATTGCTGACAATGTAGCAGAGGAATCCAGCTCGCCGACCCCAACGGAGGCGAATCG
CAGGACCGTCACGACGGGACGTGTGTCGACGTCGAGTGCCGTGCGGACGACGTGGACGACGACTTTGAGCGACGG
GGGCGTTACGACTCTCACGTCGACGTCGTGGGTCGCCGTCGTCCCCTCGGAAACAGCGGCCCCGTCCAGCCGTTC
CAGAGAAGCCGACTTGCAAAACGCTGCGCCACAAATGCAAGTCGAGGCTACACTGTTCGCAATGGTGGCCGCTTT
CGCCGGCGCTATCATACTGATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail