Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|1406
Gene name
Location	scaffold_1481:201..1530
Strand	+
Gene length (bp)	1329
Transcript length (bp)	999
Coding sequence length (bp)	996
Protein length (aa)	332

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07264	EI24	Etoposide-induced protein 2.4 (EI24)	2.2E-16	71	285

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Endoplasmic reticulum	Transmembrane domain	0.1959	0.2101	0.191	0.1254	0.5313	0.1432	0.6438	0.4708	0.5227	0.1213

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	207	229	22
2	264	286	22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	194.45	103.85	285.04
CcL	In ants, during behavior modification	143.07	75.14	211.00
CcD	In ants, recently dead	80.70	44.05	117.36

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.202498	no
SC16a	CcD	0.000286	yes
CcL	CcD	0.010753	yes

Orthologs

Orthofinder run ID	4
Orthogroup	6692
Change Orthofinder run

Species	Protein ID
Ophiocordyceps camponoti-floridani	Ophcf2\|03259
Ophiocordyceps camponoti-rufipedis	Ophun1\|2874
Ophiocordyceps kimflemingae	Ophio5\|1406 (this protein)
Ophiocordyceps subramaniannii	Hirsu2\|6073

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|1406 MKFDQHVAWISRPWNENCKLQKYLDISHFSPNTIFRGVQLTFVGAYRALQNPALFTSDHYRHAAYAVVAGILIRL LVEVPILCVKALTCLISLLYTTDAMPWVTSLGNSVEFIGEHVLQLPLFFMAMMRHFFPTLDNLFMQSLRWVDMTY TKKHELQNDVPDTARPMYYANLKEYSRVSAGYDASATGTHVLSKIPLRYFRKGLVSIILFWLSSVPVIGRLVLPV ASFYTFKRTLTRELLVPYFSRVQFTQDERRNWFRSREGVLFGFGLGFYALTRVPLFGVLIYGIAEASTAYLITKI TDPPPPPGKNIRTYAKHQQKWTSQQKFLSMPI
Coding	>Ophio5\|1406 ATGAAATTTGACCAGCACGTCGCTTGGATTTCTCGTCCTTGGAACGAAAATTGCAAGCTTCAAAAATACCTGGAC ATATCCCACTTCAGTCCGAACACTATTTTCCGCGGCGTTCAGCTTACGTTTGTCGGAGCCTATCGTGCTTTGCAA AACCCGGCATTGTTTACGAGTGATCACTATCGCCATGCAGCATATGCTGTTGTGGCAGGAATACTTATTCGGCTT CTGGTGGAAGTACCGATTTTATGTGTCAAAGCCTTGACATGCTTGATCTCGCTTCTATACACTACAGATGCGATG CCCTGGGTCACGTCTTTGGGCAACAGTGTTGAATTTATCGGTGAACATGTGTTGCAGCTTCCCCTATTCTTCATG GCTATGATGCGTCACTTCTTTCCTACCCTTGACAATCTATTCATGCAATCTCTCCGGTGGGTTGACATGACCTAT ACTAAGAAGCATGAGCTCCAAAACGATGTTCCCGATACGGCGCGACCTATGTACTATGCCAACCTGAAAGAGTAT TCTCGAGTCAGTGCTGGCTACGACGCTTCGGCCACTGGCACCCATGTTCTGTCCAAGATTCCACTTCGATACTTT CGCAAGGGTCTGGTCTCGATCATCTTGTTCTGGTTGTCTTCCGTTCCGGTTATAGGACGACTAGTGCTGCCAGTT GCCAGCTTTTACACCTTCAAAAGGACCCTGACGAGGGAACTATTAGTACCCTACTTCTCCCGTGTCCAGTTTACT CAAGATGAGAGAAGAAATTGGTTTCGAAGTCGAGAAGGTGTTTTATTTGGCTTCGGCCTCGGATTCTACGCTCTA ACCAGAGTCCCGCTCTTTGGGGTACTCATCTATGGGATTGCCGAGGCCTCAACCGCTTATCTGATTACGAAAATC ACAGATCCGCCACCCCCGCCTGGAAAAAATATACGAACGTATGCTAAACATCAGCAGAAGTGGACAAGTCAGCAG AAGTTTCTTAGTATGCCTATA
Transcript	>Ophio5\|1406 ATGAAATTTGACCAGCACGTCGCTTGGATTTCTCGTCCTTGGAACGAAAATTGCAAGCTTCAAAAATACCTGGAC ATATCCCACTTCAGTCCGAACACTATTTTCCGCGGCGTTCAGCTTACGTTTGTCGGAGCCTATCGTGCTTTGCAA AACCCGGCATTGTTTACGAGTGATCACTATCGCCATGCAGCATATGCTGTTGTGGCAGGAATACTTATTCGGCTT CTGGTGGAAGTACCGATTTTATGTGTCAAAGCCTTGACATGCTTGATCTCGCTTCTATACACTACAGATGCGATG CCCTGGGTCACGTCTTTGGGCAACAGTGTTGAATTTATCGGTGAACATGTGTTGCAGCTTCCCCTATTCTTCATG GCTATGATGCGTCACTTCTTTCCTACCCTTGACAATCTATTCATGCAATCTCTCCGGTGGGTTGACATGACCTAT ACTAAGAAGCATGAGCTCCAAAACGATGTTCCCGATACGGCGCGACCTATGTACTATGCCAACCTGAAAGAGTAT TCTCGAGTCAGTGCTGGCTACGACGCTTCGGCCACTGGCACCCATGTTCTGTCCAAGATTCCACTTCGATACTTT CGCAAGGGTCTGGTCTCGATCATCTTGTTCTGGTTGTCTTCCGTTCCGGTTATAGGACGACTAGTGCTGCCAGTT GCCAGCTTTTACACCTTCAAAAGGACCCTGACGAGGGAACTATTAGTACCCTACTTCTCCCGTGTCCAGTTTACT CAAGATGAGAGAAGAAATTGGTTTCGAAGTCGAGAAGGTGTTTTATTTGGCTTCGGCCTCGGATTCTACGCTCTA ACCAGAGTCCCGCTCTTTGGGGTACTCATCTATGGGATTGCCGAGGCCTCAACCGCTTATCTGATTACGAAAATC ACAGATCCGCCACCCCCGCCTGGAAAAAATATACGAACGTATGCTAAACATCAGCAGAAGTGGACAAGTCAGCAG AAGTTTCTTAGTATGCCTATATAA
Gene	>Ophio5\|1406 ATGAAATTTGACCAGCACGTCGCTTGGATTTCTCGTCCTTGGAACGAAAATTGCAAGCTTCAAAAATACCTGGAC ATATCCCACTTCAGTCCGAACACTATTTTCCGCGGCGTTCAGCTTACGTTTGTCGGAGGCCAGTGACGCCTTTTC AAAAGGGAAATATAGATCTAATACTGATTTTCCACGCGCAGCCTATCGTGCTTTGCAAAACCCGGCATTGTTTAC GAGTGATCACTATCGCCATGCAGCATATGCTGTTGTGGCAGGAATACTTATTCGGCTTCTGGTGGAAGTACCGGT AAGCAATTTTGATTTGCCGATAATACCCGCCCAGGTTGCCGACTATCGACCGACTCATGCACCCACTCATGCCAC CCACGCATATATAGATTTTATGTGTCAAAGCCTTGACATGCTTGATCTCGCTTCTATACACTACAGATGCGATGC CCTGGGTCACGTCTTTGGGCAACAGTGTTGAATTTATCGGTGAACATGTGTTGCAGCTTCCCCTATTCTTCATGG CTATGATGCGTCACTTCTTTCCTACCCTTGACAATCTGTAAGTCCGTCTTATCTGATTTTCCCTAATTATTCGTT TCCCATGACTCTATAAGTGCTCGACTGACCTCGATTATTTGTAGATTCATGCAATCTCTCCGGTGGGTTGACATG ACCTATACTAAGAAGCATGAGCTCCAAAACGATGTTCCCGATACGGCGCGACCTATGTACTATGCCAACCTGAAA GAGTATTCTCGAGTCAGTGCTGGCTACGACGCTTCGGCCACTGGCACCCATGTTCTGTCCAAGATTCCACTTCGA TACTTTCGCAAGGGTCTGGTCTCGATCATCTTGTTCTGGTTGTCTTCCGTTCCGGTTATAGGACGACTAGTGCTG CCAGTTGCCAGCTTTTACACCTTCAAAAGGTCTGTCGGTGTCGGCCTAGCCAGCCTCATCTTCGGGTCGAGTGTA TTTTTGCCGAGACGATATATTGTTGTTTTCTTACAGGCCTACTTTTCAACCAGGACCCTGACGAGGGAACTATTA GTACCCTACTTCTCCCGTGTCCAGTTTACTCAAGATGAGAGAAGAAATTGGTTTCGAAGTCGAGAAGGTGTTTTA TTTGGCTTCGGCCTCGGATTCTACGCTCTAACCAGAGTCCCGCTCTTTGGGGTACTCATCTATGGGATTGCCGAG GCCTCAACCGCTTATCTGATTACGAAAATCACAGATCCGCCACCCCCGCCTGGAAAAAATATACGAACGTATGCT AAACATCAGCAGAAGTGGACAAGTCAGCAGAAGTTTCTTAGTATGCCTATATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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