© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophio5|139 |
| Gene name | |
| Location | scaffold_101:9495..11449 |
| Strand | - |
| Gene length (bp) | 1954 |
| Transcript length (bp) | 1890 |
| Coding sequence length (bp) | 1887 |
| Protein length (aa) | 629 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1374 | 0.0996 | 0.8639 | 0.1373 | 0.2865 | 0.1397 | 0.1308 | 0.2181 | 0.2756 | 0.0325 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 17 | 0.995369 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 249 | 271 | 22 |
| 2 | 281 | 303 | 22 |
| 3 | 329 | 351 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 8314 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-rufipedis | Ophun1|6714 |
| Ophiocordyceps kimflemingae | Ophio5|139 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|139 MRVVTWLLVARAGQATASSRRTEGHSELATEALRQPLALNSTWTSLFSSSNTIQGPKLVLVGDNGQSNHTQEEKV RRQHISEGQSEATTMKLPSTARSRRTREARQKADGSETDYDAVVDAEFRQKEVEYRMRLIQKYRDDQERYLPHYR VFWDQAPLTDVLGGILHKRDEEAQPKALEAMWKTMGKFFEFDQLKDFQDGTLGPRMAKRMEQQRADFVTKTNQLA SKTAGKAVKPIPSINPRNVKAWSLKAWAAFGSLLYGYWAYAIGDAVNDVVWHNGTYIEVGAAVASIVPLVGCAAN AAADDIARGEFGKVQKVDFAACIAIDSAILIGVAIATAAGTPVAGMIVGMAGLALHIFGRHYLVKWIADQEQRRQ AEYLEQRDVLGNMLVKEWIVHVGEQLAQDSRPNSVQGKKLIETFRREAAGATYNAASDLDKVKRALASPTTSADT KKQLEGYVPLIQNDICDALRVMKELSIDSVYNNVRISTHVVKTETYYAVSRAIKEYWKTDYEERTKKVKQILNHK VQNDILPLALSEIENYMDRVMMDCVSNAVKVKVEQRSRSSSALWWEVAAKEKLIPPHPERLLTPDLKVWEDARMK ELWKQLRKYELEKNTTIPNMGEFWNEDPA |
| Coding | >Ophio5|139 ATGCGGGTCGTGACTTGGCTCCTTGTTGCCCGTGCAGGGCAGGCTACTGCGAGTTCAAGACGGACTGAAGGGCAT TCGGAACTGGCTACCGAAGCTCTAAGACAACCACTTGCCCTGAATTCAACATGGACTAGCCTGTTCTCGTCGTCG AATACCATCCAGGGGCCTAAGCTTGTTTTAGTTGGGGATAACGGGCAATCCAATCACACGCAGGAGGAGAAGGTT CGGCGACAACACATTTCAGAAGGACAAAGCGAAGCGACAACTATGAAGCTTCCAAGCACGGCCAGGTCGAGGAGA ACTAGAGAGGCGAGGCAAAAGGCAGACGGTTCAGAAACAGACTACGATGCCGTTGTGGACGCAGAGTTCCGACAG AAAGAAGTCGAGTATAGGATGCGACTGATACAGAAATATCGCGATGATCAAGAGCGCTACCTCCCTCATTACAGA GTCTTTTGGGATCAAGCACCGCTGACAGATGTGCTGGGTGGGATCCTACACAAACGGGACGAAGAGGCGCAGCCG AAAGCGTTGGAGGCCATGTGGAAGACCATGGGCAAGTTCTTCGAATTCGACCAGTTGAAGGATTTCCAAGATGGA ACTCTCGGGCCTCGAATGGCGAAACGGATGGAACAGCAACGGGCCGATTTCGTCACCAAGACGAATCAGCTCGCC AGCAAAACGGCAGGCAAAGCCGTCAAGCCCATCCCTTCCATCAATCCAAGGAACGTGAAAGCCTGGAGCTTGAAG GCCTGGGCCGCTTTCGGCTCTCTTCTCTACGGCTATTGGGCTTACGCCATCGGCGACGCAGTAAACGACGTGGTG TGGCATAACGGGACATATATCGAAGTTGGTGCCGCCGTGGCCAGCATCGTCCCCTTGGTCGGATGCGCCGCCAAC GCGGCAGCAGACGATATTGCCAGGGGCGAGTTCGGCAAAGTGCAGAAAGTCGACTTTGCCGCATGCATCGCCATC GACTCGGCCATCCTCATCGGCGTAGCCATCGCCACGGCAGCAGGGACTCCCGTTGCCGGTATGATTGTGGGCATG GCTGGTCTCGCTTTGCACATATTCGGCCGCCACTATCTCGTCAAATGGATCGCCGACCAGGAGCAAAGGAGACAA GCAGAATATCTCGAGCAACGAGACGTGCTCGGAAATATGCTCGTCAAGGAATGGATTGTTCACGTCGGCGAGCAG CTTGCCCAAGACTCGAGGCCCAATTCCGTCCAAGGCAAGAAACTTATCGAGACGTTCCGGAGGGAGGCGGCTGGG GCTACCTACAACGCAGCATCCGACCTCGACAAGGTAAAGAGGGCGCTTGCTTCTCCGACGACGTCGGCCGACACC AAGAAGCAACTTGAGGGATACGTCCCCCTGATTCAGAACGATATATGCGATGCTCTCAGGGTGATGAAGGAGCTT AGCATCGACTCCGTCTATAACAACGTCCGCATCTCGACTCATGTTGTCAAGACCGAGACCTATTATGCCGTGTCC CGAGCCATTAAAGAGTACTGGAAAACCGACTACGAAGAGCGGACGAAAAAGGTAAAACAAATCCTCAACCACAAG GTCCAGAATGATATATTACCCCTGGCACTGAGTGAAATCGAAAACTACATGGACAGAGTCATGATGGATTGCGTG AGCAACGCCGTCAAGGTCAAAGTCGAACAGCGCTCTCGCTCGTCGTCGGCCTTGTGGTGGGAAGTCGCTGCGAAG GAAAAGCTGATACCGCCGCACCCGGAGCGACTACTGACGCCCGATCTTAAAGTATGGGAGGACGCTCGGATGAAG GAGCTCTGGAAACAGCTCCGGAAGTATGAACTGGAGAAGAACACGACGATTCCAAACATGGGCGAGTTCTGGAAC GAAGACCCGGCT |
| Transcript | >Ophio5|139 ATGCGGGTCGTGACTTGGCTCCTTGTTGCCCGTGCAGGGCAGGCTACTGCGAGTTCAAGACGGACTGAAGGGCAT TCGGAACTGGCTACCGAAGCTCTAAGACAACCACTTGCCCTGAATTCAACATGGACTAGCCTGTTCTCGTCGTCG AATACCATCCAGGGGCCTAAGCTTGTTTTAGTTGGGGATAACGGGCAATCCAATCACACGCAGGAGGAGAAGGTT CGGCGACAACACATTTCAGAAGGACAAAGCGAAGCGACAACTATGAAGCTTCCAAGCACGGCCAGGTCGAGGAGA ACTAGAGAGGCGAGGCAAAAGGCAGACGGTTCAGAAACAGACTACGATGCCGTTGTGGACGCAGAGTTCCGACAG AAAGAAGTCGAGTATAGGATGCGACTGATACAGAAATATCGCGATGATCAAGAGCGCTACCTCCCTCATTACAGA GTCTTTTGGGATCAAGCACCGCTGACAGATGTGCTGGGTGGGATCCTACACAAACGGGACGAAGAGGCGCAGCCG AAAGCGTTGGAGGCCATGTGGAAGACCATGGGCAAGTTCTTCGAATTCGACCAGTTGAAGGATTTCCAAGATGGA ACTCTCGGGCCTCGAATGGCGAAACGGATGGAACAGCAACGGGCCGATTTCGTCACCAAGACGAATCAGCTCGCC AGCAAAACGGCAGGCAAAGCCGTCAAGCCCATCCCTTCCATCAATCCAAGGAACGTGAAAGCCTGGAGCTTGAAG GCCTGGGCCGCTTTCGGCTCTCTTCTCTACGGCTATTGGGCTTACGCCATCGGCGACGCAGTAAACGACGTGGTG TGGCATAACGGGACATATATCGAAGTTGGTGCCGCCGTGGCCAGCATCGTCCCCTTGGTCGGATGCGCCGCCAAC GCGGCAGCAGACGATATTGCCAGGGGCGAGTTCGGCAAAGTGCAGAAAGTCGACTTTGCCGCATGCATCGCCATC GACTCGGCCATCCTCATCGGCGTAGCCATCGCCACGGCAGCAGGGACTCCCGTTGCCGGTATGATTGTGGGCATG GCTGGTCTCGCTTTGCACATATTCGGCCGCCACTATCTCGTCAAATGGATCGCCGACCAGGAGCAAAGGAGACAA GCAGAATATCTCGAGCAACGAGACGTGCTCGGAAATATGCTCGTCAAGGAATGGATTGTTCACGTCGGCGAGCAG CTTGCCCAAGACTCGAGGCCCAATTCCGTCCAAGGCAAGAAACTTATCGAGACGTTCCGGAGGGAGGCGGCTGGG GCTACCTACAACGCAGCATCCGACCTCGACAAGGTAAAGAGGGCGCTTGCTTCTCCGACGACGTCGGCCGACACC AAGAAGCAACTTGAGGGATACGTCCCCCTGATTCAGAACGATATATGCGATGCTCTCAGGGTGATGAAGGAGCTT AGCATCGACTCCGTCTATAACAACGTCCGCATCTCGACTCATGTTGTCAAGACCGAGACCTATTATGCCGTGTCC CGAGCCATTAAAGAGTACTGGAAAACCGACTACGAAGAGCGGACGAAAAAGGTAAAACAAATCCTCAACCACAAG GTCCAGAATGATATATTACCCCTGGCACTGAGTGAAATCGAAAACTACATGGACAGAGTCATGATGGATTGCGTG AGCAACGCCGTCAAGGTCAAAGTCGAACAGCGCTCTCGCTCGTCGTCGGCCTTGTGGTGGGAAGTCGCTGCGAAG GAAAAGCTGATACCGCCGCACCCGGAGCGACTACTGACGCCCGATCTTAAAGTATGGGAGGACGCTCGGATGAAG GAGCTCTGGAAACAGCTCCGGAAGTATGAACTGGAGAAGAACACGACGATTCCAAACATGGGCGAGTTCTGGAAC GAAGACCCGGCTTAG |
| Gene | >Ophio5|139 ATGCGGGTCGTGACTTGGCTCCTTGTTGCCCGTGCAGGGCAGGCTACTGCGAGTTCAAGACGGACTGAAGGGCAT TCGGAACTGGCTACCGAAGCTCTAAGACAACCACTTGCCCTGAATTCAACATGGACTAGCCTGTTCTCGTCGTCG AATACCATCCAGGGGCCTAAGCTTGTTTTAGTTGGGGATAACGGGCAATCCAATCACACGCAGGAGGAGAAGGTT CGGCGACAACACATTTCAGAAGGACAAAGCGAAGCGACAACTATGAAGCTTCCAAGCACGGCCAGGTCGAGGAGA ACTAGAGAGGCGAGGCAAAAGGCAGACGGTTCAGAAACAGACTACGATGCCGTTGTGGACGCAGAGTTCCGACAG AAAGAAGTCGAGTATAGGATGCGACTGATACAGAAATATCGCGATGATCAAGAGCGCTACCTCCCTCATTACAGA GTCTTTTGGGATCAAGCACCGCTGACAGATGTGCTGGGTGGGATCCTACACAAACGGGACGAAGAGGCGCAGCCG AAAGCGTTGGAGGCCATGTGGAAGACCATGGGCAAGTTCTTCGAATTCGACCAGTTGAAGGATTTCCAAGATGGA ACTCTCGGGCCTCGAATGGCGAAACGGATGGAACAGCAACGGGCCGATTTCGTCACCAAGACGAATCAGCTCGCC AGCAAAACGGCAGGCAAAGCCGTCAAGCCCATCCCTTCCATCAATCCAAGGAACGTGAAAGCCTGGAGCTTGAAG GCCTGGGCCGCTTTCGGCTCTCTTCTCTACGGCTATTGGGCTTACGCCATCGGCGACGCAGTAAACGACGTGGTG TGGCATAACGGGACATATATCGAAGTTGGTGCCGCCGTGGCCAGCATCGTCCCCTTGGTCGGATGCGCCGCCAAC GCGGCAGCAGACGATATTGCCAGGGGCGAGTTCGGCAAAGTGCAGAAAGTCGACTTTGCCGCATGCATCGCCATC GACTCGGCCATCCTCATCGGCGTAGCCATCGCCACGGCAGCAGGGACTCCCGTTGCCGGTATGATTGTGGGCATG GCTGGTCTCGCTTTGCACATATTCGGCCGCCACTATCTCGTCAAATGGATCGCCGACCAGGAGCAAAGGAGACAA GCAGAATATCTCGAGCAACGAGACGTGCTCGGAAATATGCTCGTCAAGGAATGGATTGTTCACGTCGGCGAGCAG CTTGCCCAAGACTCGAGGCCCAATTCCGTCCAAGGCAAGAAACTTATCGAGACGTTCCGGAGGGAGGCGGCTGGG GCTACCTACAACGCAGCATCCGACCTCGACAAGGTAAAGAGGGCGCTTGCTTCTCCGACGACGTCGGCCGACACC AAGAAGCAACTTGAGGGATACGTCCCCCTGATTCAGAACGATATATGCGATGCTCTCAGGGTGATGAAGGAGCTT AGCATCGACTCCGTCTATAACAACGTCCGCATCTCGACTCATGTTGTCAAGACCGAGACCTATTATGCCGTGTCC CGAGCCATTAAAGAGTACTGGAAAACCGACTACGAAGAGCGGACGAAAAAGGTAAAACAAATCCTCAACCACAAG GTCCAGAATGATATATTACCCCTGGCACTGAGTGAAATCGAAAACTACATGGACAGAGTCATGATGGATTGCGTG AGCAACGCCGTCAAGGTCAAAGTCGAACAGCGCTCTCGCTCGTCGTCGGCCTTGTGGTGGGAAGTCGCTGCGAAG GAAAAGCTGATACCGCCGCACCCGGAGCGACTACTGACGCCCGATCTTAAAGTATGGGAGGACGCTCGGATGAAG GAGCTCTGGAAACAGCTCCGGAAGTATGAACTGGAGAAGAACACGACGATTCCAAACATGTAAGTCAACCTTGTT GTTGCCGAAAAGGGGGAAGGGCGACTGACTGAGACGGATCGTGAATAGGGGCGAGTTCTGGAACGAAGACCCGGC TTAG |