Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|1385
Gene name
Location	scaffold_147:29280..30336
Strand	-
Gene length (bp)	1056
Transcript length (bp)	1056
Coding sequence length (bp)	1053
Protein length (aa)	351

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05637	Glyco_transf_34	galactosyl transferase GMA12/MNN10 family	2.9E-16	142	309

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P78817\|YFE6_SCHPO	Uncharacterized alpha-1,2-galactosyltransferase C637.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC637.06 PE=2 SV=2	76	307	2.0E-06
sp\|O94622\|YBKD_SCHPO	Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1289.13c PE=3 SV=1	153	306	4.0E-06

GO

GO Term	Description	Terminal node
GO:0016021	integral component of membrane	Yes
GO:0016757	glycosyltransferase activity	Yes
GO:0110165	cellular anatomical entity	No
GO:0031224	intrinsic component of membrane	No
GO:0003824	catalytic activity	No
GO:0016740	transferase activity	No
GO:0005575	cellular_component	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 18	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|1385 MAIFLVYQLFATLDTSSVSPAKTPFHFRQDAKLKSRRLRVYGDDDCVSDIDPWALVPEAVAIRKSCRKSHSALSS LEMKRPKVATVSAHITKAKNSDRFYQKAIQTHLLHRIVHRSHLKLLCSPLVDALWNKEAFILSILTEELVKPPER RLEWIFWADRDSVILDYCRDATDFLPRSEVDDSSASAGSPHAKQINLLIANDRNGLNDGTFLLRVGKWAIDLLSD TLAFPRFKPDVHLTFTEQSAMENLLREDRYKDGVRYVPQHWFNAWPQQEGRSGEYATLDNTTKLDKWAVRRGDFL VHFAGCSDKEREVTGFTETARQVGNVWESGRALRDVSAEIAEFWSNSSRTP
Coding	>Ophio5\|1385 ATGGCCATCTTTCTGGTTTATCAACTATTTGCAACACTCGACACCTCCTCTGTCTCTCCCGCCAAAACGCCATTT CACTTTCGTCAAGATGCAAAACTGAAGTCACGTCGACTACGAGTCTACGGTGACGATGACTGCGTTTCCGATATA GACCCTTGGGCTCTTGTCCCTGAAGCTGTCGCTATCCGGAAATCTTGTCGAAAATCACACTCGGCCCTAAGCTCA CTGGAAATGAAGAGGCCGAAAGTTGCAACTGTGAGCGCCCACATTACAAAGGCCAAGAATTCAGACAGATTCTAT CAAAAGGCCATTCAGACTCACCTCCTGCACCGTATCGTCCATCGTTCACACTTGAAGCTGCTTTGTTCGCCGCTG GTTGACGCCCTTTGGAATAAAGAAGCTTTTATCCTATCTATTCTAACAGAGGAGTTGGTCAAGCCGCCGGAGAGG CGCCTAGAATGGATTTTTTGGGCAGATCGAGACAGCGTTATACTCGACTACTGTCGAGATGCCACCGACTTCCTC CCTCGGTCCGAAGTCGACGATTCCTCCGCCTCTGCAGGGTCACCGCACGCAAAACAGATTAACCTCTTGATAGCC AACGACCGCAACGGGTTAAATGACGGCACCTTTCTCCTGCGTGTTGGGAAATGGGCCATCGACCTTTTGAGCGAC ACGCTTGCGTTTCCTCGCTTCAAGCCCGACGTTCACCTGACATTCACGGAGCAAAGCGCGATGGAGAATCTTCTT CGCGAAGACAGATACAAAGACGGCGTTCGATACGTTCCGCAACACTGGTTCAACGCGTGGCCCCAACAAGAAGGT CGGTCCGGGGAATACGCAACACTAGATAATACGACAAAGCTGGATAAATGGGCTGTTCGACGAGGTGACTTTCTT GTGCACTTTGCTGGTTGCTCGGACAAGGAACGTGAGGTCACCGGCTTTACTGAGACTGCACGGCAAGTCGGTAAC GTGTGGGAATCGGGTCGAGCGTTGAGAGATGTCAGTGCGGAAATTGCAGAGTTCTGGTCGAATAGTTCTCGAACG CCC
Transcript	>Ophio5\|1385 ATGGCCATCTTTCTGGTTTATCAACTATTTGCAACACTCGACACCTCCTCTGTCTCTCCCGCCAAAACGCCATTT CACTTTCGTCAAGATGCAAAACTGAAGTCACGTCGACTACGAGTCTACGGTGACGATGACTGCGTTTCCGATATA GACCCTTGGGCTCTTGTCCCTGAAGCTGTCGCTATCCGGAAATCTTGTCGAAAATCACACTCGGCCCTAAGCTCA CTGGAAATGAAGAGGCCGAAAGTTGCAACTGTGAGCGCCCACATTACAAAGGCCAAGAATTCAGACAGATTCTAT CAAAAGGCCATTCAGACTCACCTCCTGCACCGTATCGTCCATCGTTCACACTTGAAGCTGCTTTGTTCGCCGCTG GTTGACGCCCTTTGGAATAAAGAAGCTTTTATCCTATCTATTCTAACAGAGGAGTTGGTCAAGCCGCCGGAGAGG CGCCTAGAATGGATTTTTTGGGCAGATCGAGACAGCGTTATACTCGACTACTGTCGAGATGCCACCGACTTCCTC CCTCGGTCCGAAGTCGACGATTCCTCCGCCTCTGCAGGGTCACCGCACGCAAAACAGATTAACCTCTTGATAGCC AACGACCGCAACGGGTTAAATGACGGCACCTTTCTCCTGCGTGTTGGGAAATGGGCCATCGACCTTTTGAGCGAC ACGCTTGCGTTTCCTCGCTTCAAGCCCGACGTTCACCTGACATTCACGGAGCAAAGCGCGATGGAGAATCTTCTT CGCGAAGACAGATACAAAGACGGCGTTCGATACGTTCCGCAACACTGGTTCAACGCGTGGCCCCAACAAGAAGGT CGGTCCGGGGAATACGCAACACTAGATAATACGACAAAGCTGGATAAATGGGCTGTTCGACGAGGTGACTTTCTT GTGCACTTTGCTGGTTGCTCGGACAAGGAACGTGAGGTCACCGGCTTTACTGAGACTGCACGGCAAGTCGGTAAC GTGTGGGAATCGGGTCGAGCGTTGAGAGATGTCAGTGCGGAAATTGCAGAGTTCTGGTCGAATAGTTCTCGAACG CCCTGA
Gene	>Ophio5\|1385 ATGGCCATCTTTCTGGTTTATCAACTATTTGCAACACTCGACACCTCCTCTGTCTCTCCCGCCAAAACGCCATTT CACTTTCGTCAAGATGCAAAACTGAAGTCACGTCGACTACGAGTCTACGGTGACGATGACTGCGTTTCCGATATA GACCCTTGGGCTCTTGTCCCTGAAGCTGTCGCTATCCGGAAATCTTGTCGAAAATCACACTCGGCCCTAAGCTCA CTGGAAATGAAGAGGCCGAAAGTTGCAACTGTGAGCGCCCACATTACAAAGGCCAAGAATTCAGACAGATTCTAT CAAAAGGCCATTCAGACTCACCTCCTGCACCGTATCGTCCATCGTTCACACTTGAAGCTGCTTTGTTCGCCGCTG GTTGACGCCCTTTGGAATAAAGAAGCTTTTATCCTATCTATTCTAACAGAGGAGTTGGTCAAGCCGCCGGAGAGG CGCCTAGAATGGATTTTTTGGGCAGATCGAGACAGCGTTATACTCGACTACTGTCGAGATGCCACCGACTTCCTC CCTCGGTCCGAAGTCGACGATTCCTCCGCCTCTGCAGGGTCACCGCACGCAAAACAGATTAACCTCTTGATAGCC AACGACCGCAACGGGTTAAATGACGGCACCTTTCTCCTGCGTGTTGGGAAATGGGCCATCGACCTTTTGAGCGAC ACGCTTGCGTTTCCTCGCTTCAAGCCCGACGTTCACCTGACATTCACGGAGCAAAGCGCGATGGAGAATCTTCTT CGCGAAGACAGATACAAAGACGGCGTTCGATACGTTCCGCAACACTGGTTCAACGCGTGGCCCCAACAAGAAGGT CGGTCCGGGGAATACGCAACACTAGATAATACGACAAAGCTGGATAAATGGGCTGTTCGACGAGGTGACTTTCTT GTGCACTTTGCTGGTTGCTCGGACAAGGAACGTGAGGTCACCGGCTTTACTGAGACTGCACGGCAAGTCGGTAAC GTGTGGGAATCGGGTCGAGCGTTGAGAGATGTCAGTGCGGAAATTGCAGAGTTCTGGTCGAATAGTTCTCGAACG CCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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