Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1340
Gene name
Locationscaffold_144:28092..30597
Strand-
Gene length (bp)2505
Transcript length (bp)2352
Coding sequence length (bp)2349
Protein length (aa) 783

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09359 VTC VTC domain 8.5E-97 205 478
PF02656 DUF202 Domain of unknown function (DUF202) 3.4E-12 678 742

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P47075|VTC4_YEAST Vacuolar transporter chaperone 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC4 PE=1 SV=2 1 773 0.0E+00
sp|P78810|VTC4_SCHPO Vacuolar transporter chaperone 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc4 PE=1 SV=2 1 772 0.0E+00
sp|O13718|VTC2_SCHPO Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 1 515 2.0E-80
sp|Q02725|VTC3_YEAST Vacuolar transporter chaperone 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC3 PE=1 SV=1 1 498 2.0E-68
sp|P43585|VTC2_YEAST Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 1 498 3.0E-67
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Swissprot ID Swissprot Description Start End E-value
sp|P47075|VTC4_YEAST Vacuolar transporter chaperone 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC4 PE=1 SV=2 1 773 0.0E+00
sp|P78810|VTC4_SCHPO Vacuolar transporter chaperone 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc4 PE=1 SV=2 1 772 0.0E+00
sp|O13718|VTC2_SCHPO Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 1 515 2.0E-80
sp|Q02725|VTC3_YEAST Vacuolar transporter chaperone 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC3 PE=1 SV=1 1 498 2.0E-68
sp|P43585|VTC2_YEAST Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 1 498 3.0E-67
sp|Q9UR17|VTC1_SCHPO Vacuolar transporter chaperone 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nrf1 PE=2 SV=1 658 775 5.0E-30
sp|P40046|VTC1_YEAST Vacuolar transporter chaperone 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC1 PE=1 SV=3 665 773 2.0E-24
sp|O13718|VTC2_SCHPO Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 651 779 4.0E-14
sp|Q8LBH4|SPX1_ARATH SPX domain-containing protein 1 OS=Arabidopsis thaliana GN=SPX1 PE=2 SV=2 1 178 3.0E-09
sp|P43585|VTC2_YEAST Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 646 778 6.0E-09
sp|Q7Y0F6|SPX5_ORYSJ SPX domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=SPX5 PE=2 SV=1 1 176 2.0E-07
sp|A2XHU0|SPX5_ORYSI SPX domain-containing protein 5 OS=Oryza sativa subsp. indica GN=SPX5 PE=3 SV=1 1 176 2.0E-07
sp|Q5PP62|SPX3_ARATH SPX domain-containing protein 3 OS=Arabidopsis thaliana GN=SPX3 PE=2 SV=1 1 205 4.0E-07
sp|A2X254|SPX2_ORYSI SPX domain-containing protein 2 OS=Oryza sativa subsp. indica GN=SPX2 PE=3 SV=1 1 176 8.0E-07
sp|Q6Z784|SPX2_ORYSJ SPX domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=SPX2 PE=2 SV=1 1 176 9.0E-07
sp|Q94A21|SPX4_ARATH SPX domain-containing protein 4 OS=Arabidopsis thaliana GN=SPX4 PE=2 SV=1 1 166 1.0E-06
sp|O59712|YBH4_SCHPO Uncharacterized transporter C3B8.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3B8.04c PE=3 SV=1 107 165 3.0E-06
sp|O48781|SPX2_ARATH SPX domain-containing protein 2 OS=Arabidopsis thaliana GN=SPX2 PE=2 SV=1 50 199 5.0E-06
sp|A8DZH4|XPR1_DANRE Xenotropic and polytropic retrovirus receptor 1 homolog OS=Danio rerio GN=xpr1 PE=3 SV=1 1 147 7.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 59 0.45

Transmembrane Domains

Domain # Start End Length
1 687 709 22
2 716 738 22
3 753 775 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1340
MKFGEQLRSSVIREYQWYYIDYNGLKAELKNATGPSKADAVGGREWTEDDETRFVGKLEDELEKVHTKQQVKAME
ISRRIAVSEREVRDVVNRLNERGLGDEGPSEEEFQLLEEDLGDIIAEVHDLAKFVQLNYTGFYKIIKKHDKMTGW
HLRPAFETRLKAKPFYKENYETSVIKLSTLYDLVRTRGNPVQGDSAAGGSQASFVRQTTKYWVHPDNVTELKLII
LKHLPVLVFNAGKAFEQQDSAITSIYYDNPDSWDLYEGRLKKTEGAEAIRLRWYGGMQTENIFVERKTHREDWTG
EKSVKARFSIKEKNVNAYLRGELLPAAMFEKARREGRKSEKAIAEDERLASEIQYAVLAKGYRPVCRSFYNRTAF
QLPADARVRISLDTELTMIREDNLDGRSRCGDNWRRMDIGIDYPFAQLAPEDIVRFPYAVLEVKLQTQLGQEPPA
WVRQLISSHLVEAVPKFSKFIHGAACLFPDRIHLLPFWMPQMDVDIRKPVTHDFGIRRRPGTAGTTTTSSEDDED
LDSDVDDNAAANSGERPGRPSSAPQPAAAAVTGRASTNGGADTEGQTTDGVAADDDDYPIYDSDDEYDENYALEE
ARRVGGWHYYSILVATKGRALGRGAISVAKRLTPGPRPSRIPPTQRHQMLFGSEAVQQRKFRAPPGKKIYVPVRV
EPKVYFAAERTFLGWLEYSIYIGAIAVTLLNFGSQTSSPSFWTAAVFTLLAILSLAYSVTIYLYRSRAIRKRTAA
KYYDRWGPSVLCLALFVAVAMNFAFSGRERGVW
Coding >Ophio5|1340
ATGAAGTTCGGCGAACAGCTGCGTTCGAGCGTAATACGCGAGTATCAATGGTATTACATCGACTACAACGGTCTC
AAGGCCGAGCTTAAGAACGCCACGGGCCCCTCCAAGGCCGATGCCGTGGGCGGCAGGGAATGGACCGAGGATGAC
GAGACGCGCTTCGTGGGCAAGCTCGAGGATGAGCTCGAAAAGGTCCACACGAAGCAGCAGGTCAAGGCCATGGAG
ATCTCGCGCCGTATCGCCGTCAGCGAGCGCGAGGTTCGCGATGTCGTCAACCGCCTCAATGAACGCGGCCTCGGT
GACGAAGGGCCCTCGGAGGAGGAGTTCCAGCTGCTGGAGGAGGACCTCGGGGATATCATCGCCGAGGTTCACGAC
CTCGCCAAGTTTGTCCAGCTCAATTATACCGGATTCTACAAGATTATCAAGAAGCACGACAAAATGACGGGCTGG
CACCTTCGGCCGGCGTTTGAAACGCGTCTCAAGGCCAAGCCCTTTTACAAGGAAAACTACGAGACGTCTGTCATC
AAGCTTTCGACGCTCTACGACCTGGTCCGTACGCGCGGGAACCCAGTACAGGGCGACAGTGCCGCCGGCGGCTCT
CAGGCAAGCTTCGTGCGCCAGACGACCAAATACTGGGTGCATCCGGACAACGTGACGGAGCTGAAGCTCATCATC
CTCAAGCACCTGCCCGTTCTCGTCTTCAACGCCGGCAAGGCATTCGAGCAGCAGGACTCGGCCATCACGTCCATC
TACTACGACAATCCCGACAGCTGGGACCTGTACGAGGGCCGGCTGAAGAAGACGGAGGGCGCCGAGGCCATCCGT
CTCCGCTGGTACGGCGGCATGCAGACCGAGAACATCTTTGTCGAGCGCAAGACTCACCGCGAGGACTGGACGGGC
GAGAAGTCGGTCAAGGCCCGCTTCTCCATCAAGGAGAAGAATGTCAATGCCTACCTCAGGGGCGAGCTGCTCCCC
GCCGCCATGTTCGAAAAGGCCCGTAGAGAGGGCCGCAAGTCGGAAAAAGCCATCGCCGAGGACGAGAGGCTGGCG
TCGGAGATCCAGTACGCGGTCCTGGCCAAGGGCTATCGACCCGTCTGCCGCTCCTTTTACAACCGAACCGCCTTC
CAGCTCCCGGCCGACGCCCGGGTTCGCATCTCGCTCGACACCGAGCTGACCATGATCCGCGAAGACAACCTCGAC
GGCCGGAGCCGCTGCGGCGACAACTGGCGCCGGATGGACATTGGCATCGACTATCCCTTCGCCCAACTAGCCCCC
GAAGACATCGTCCGCTTCCCCTACGCCGTCCTCGAGGTCAAGCTCCAGACGCAGCTGGGACAGGAGCCCCCGGCT
TGGGTACGACAGCTCATCTCGTCACACCTGGTCGAGGCGGTGCCCAAGTTCTCCAAGTTCATCCACGGCGCGGCC
TGCCTGTTCCCGGACCGGATTCACCTGCTGCCGTTCTGGATGCCGCAGATGGATGTTGATATTCGTAAGCCCGTC
ACGCACGATTTCGGCATCCGCCGGAGACCCGGAACGGCGGGAACGACGACGACGTCGTCCGAGGACGACGAGGAT
CTGGACTCGGACGTAGACGACAACGCCGCCGCCAACAGCGGAGAGAGGCCAGGCCGGCCCTCGAGCGCCCCGCAA
CCGGCCGCCGCCGCCGTCACGGGTCGGGCTTCGACGAACGGGGGGGCCGACACCGAGGGCCAGACGACAGACGGC
GTAGCAGCCGACGACGACGACTACCCCATCTACGACTCGGACGACGAGTACGACGAAAACTACGCGCTCGAGGAG
GCACGACGCGTCGGCGGCTGGCACTACTACTCGATCCTAGTCGCCACCAAAGGCCGAGCCCTGGGCCGCGGCGCC
ATCAGCGTGGCCAAGAGGTTGACTCCCGGTCCTCGACCGTCTCGCATCCCGCCCACGCAGCGTCACCAGATGCTC
TTCGGCTCCGAGGCCGTGCAGCAGAGGAAGTTTCGCGCGCCGCCGGGCAAGAAGATTTACGTGCCGGTGCGGGTC
GAGCCCAAGGTTTACTTTGCCGCCGAGCGGACCTTTCTCGGATGGCTCGAGTATTCCATCTACATCGGCGCCATC
GCCGTCACGCTCCTCAACTTCGGATCGCAGACGTCGTCGCCATCATTCTGGACGGCGGCCGTCTTCACCCTCCTC
GCCATCCTGAGCTTGGCCTACTCGGTCACCATCTATCTCTATCGAAGCCGGGCGATTCGCAAACGGACCGCCGCC
AAGTATTACGATAGGTGGGGGCCGTCGGTCTTATGCCTCGCCCTCTTCGTCGCCGTGGCAATGAATTTTGCCTTT
TCCGGACGTGAGAGGGGCGTGTGG
Transcript >Ophio5|1340
ATGAAGTTCGGCGAACAGCTGCGTTCGAGCGTAATACGCGAGTATCAATGGTATTACATCGACTACAACGGTCTC
AAGGCCGAGCTTAAGAACGCCACGGGCCCCTCCAAGGCCGATGCCGTGGGCGGCAGGGAATGGACCGAGGATGAC
GAGACGCGCTTCGTGGGCAAGCTCGAGGATGAGCTCGAAAAGGTCCACACGAAGCAGCAGGTCAAGGCCATGGAG
ATCTCGCGCCGTATCGCCGTCAGCGAGCGCGAGGTTCGCGATGTCGTCAACCGCCTCAATGAACGCGGCCTCGGT
GACGAAGGGCCCTCGGAGGAGGAGTTCCAGCTGCTGGAGGAGGACCTCGGGGATATCATCGCCGAGGTTCACGAC
CTCGCCAAGTTTGTCCAGCTCAATTATACCGGATTCTACAAGATTATCAAGAAGCACGACAAAATGACGGGCTGG
CACCTTCGGCCGGCGTTTGAAACGCGTCTCAAGGCCAAGCCCTTTTACAAGGAAAACTACGAGACGTCTGTCATC
AAGCTTTCGACGCTCTACGACCTGGTCCGTACGCGCGGGAACCCAGTACAGGGCGACAGTGCCGCCGGCGGCTCT
CAGGCAAGCTTCGTGCGCCAGACGACCAAATACTGGGTGCATCCGGACAACGTGACGGAGCTGAAGCTCATCATC
CTCAAGCACCTGCCCGTTCTCGTCTTCAACGCCGGCAAGGCATTCGAGCAGCAGGACTCGGCCATCACGTCCATC
TACTACGACAATCCCGACAGCTGGGACCTGTACGAGGGCCGGCTGAAGAAGACGGAGGGCGCCGAGGCCATCCGT
CTCCGCTGGTACGGCGGCATGCAGACCGAGAACATCTTTGTCGAGCGCAAGACTCACCGCGAGGACTGGACGGGC
GAGAAGTCGGTCAAGGCCCGCTTCTCCATCAAGGAGAAGAATGTCAATGCCTACCTCAGGGGCGAGCTGCTCCCC
GCCGCCATGTTCGAAAAGGCCCGTAGAGAGGGCCGCAAGTCGGAAAAAGCCATCGCCGAGGACGAGAGGCTGGCG
TCGGAGATCCAGTACGCGGTCCTGGCCAAGGGCTATCGACCCGTCTGCCGCTCCTTTTACAACCGAACCGCCTTC
CAGCTCCCGGCCGACGCCCGGGTTCGCATCTCGCTCGACACCGAGCTGACCATGATCCGCGAAGACAACCTCGAC
GGCCGGAGCCGCTGCGGCGACAACTGGCGCCGGATGGACATTGGCATCGACTATCCCTTCGCCCAACTAGCCCCC
GAAGACATCGTCCGCTTCCCCTACGCCGTCCTCGAGGTCAAGCTCCAGACGCAGCTGGGACAGGAGCCCCCGGCT
TGGGTACGACAGCTCATCTCGTCACACCTGGTCGAGGCGGTGCCCAAGTTCTCCAAGTTCATCCACGGCGCGGCC
TGCCTGTTCCCGGACCGGATTCACCTGCTGCCGTTCTGGATGCCGCAGATGGATGTTGATATTCGTAAGCCCGTC
ACGCACGATTTCGGCATCCGCCGGAGACCCGGAACGGCGGGAACGACGACGACGTCGTCCGAGGACGACGAGGAT
CTGGACTCGGACGTAGACGACAACGCCGCCGCCAACAGCGGAGAGAGGCCAGGCCGGCCCTCGAGCGCCCCGCAA
CCGGCCGCCGCCGCCGTCACGGGTCGGGCTTCGACGAACGGGGGGGCCGACACCGAGGGCCAGACGACAGACGGC
GTAGCAGCCGACGACGACGACTACCCCATCTACGACTCGGACGACGAGTACGACGAAAACTACGCGCTCGAGGAG
GCACGACGCGTCGGCGGCTGGCACTACTACTCGATCCTAGTCGCCACCAAAGGCCGAGCCCTGGGCCGCGGCGCC
ATCAGCGTGGCCAAGAGGTTGACTCCCGGTCCTCGACCGTCTCGCATCCCGCCCACGCAGCGTCACCAGATGCTC
TTCGGCTCCGAGGCCGTGCAGCAGAGGAAGTTTCGCGCGCCGCCGGGCAAGAAGATTTACGTGCCGGTGCGGGTC
GAGCCCAAGGTTTACTTTGCCGCCGAGCGGACCTTTCTCGGATGGCTCGAGTATTCCATCTACATCGGCGCCATC
GCCGTCACGCTCCTCAACTTCGGATCGCAGACGTCGTCGCCATCATTCTGGACGGCGGCCGTCTTCACCCTCCTC
GCCATCCTGAGCTTGGCCTACTCGGTCACCATCTATCTCTATCGAAGCCGGGCGATTCGCAAACGGACCGCCGCC
AAGTATTACGATAGGTGGGGGCCGTCGGTCTTATGCCTCGCCCTCTTCGTCGCCGTGGCAATGAATTTTGCCTTT
TCCGGACGTGAGAGGGGCGTGTGGTGA
Gene >Ophio5|1340
ATGAAGTTCGGCGAACAGCTGCGTTCGAGCGTAATACGCGAGTATCAATGGTATTACATCGACTACAACGGTCTC
AAGGCCGAGCTTAAGAACGCCACGGGCCCCTCCAAGGCCGATGCCGTGGGCGGCAGGGAATGGACCGAGGATGAC
GAGACGCGCTTCGTGGGCAAGCTCGAGGATGAGCTCGAAAAGGTCCACACGAAGCAGCAGGTCAAGGCCATGGAG
ATCTCGCGCCGTATCGCCGTCAGCGAGCGCGAGGTTCGCGATGTCGTCAACCGCCTCAATGAACGCGGCCTCGGT
GACGAAGGGCCCTCGGAGGAGGAGTTCCAGCTGCTGGAGGAGGACCTCGGGGATATCATCGCCGAGGTTCACGAC
CTCGCCAAGTTTGTCCAGCTCAATTATACCGGATTCTACAAGATTATCAAGAAGCACGACGTGAGTCGCTCTCCC
TCTTTTGCTGGGTGCCCCTGACTGACCGCCTCAAGAAAATGACGGGCTGGCACCTTCGGCCGGCGTTTGAAACGC
GTCTCAAGGCCAAGCCCTTTTACAAGGAAAACTACGAGACGTCTGTCATCAAGCTTTCGACGCTCTACGACCTGG
TCCGTACGCGCGGGAACCCAGTACAGGGCGACAGTGCCGCCGGCGGCTCTCAGGCAAGCTTCGTGCGCCAGACGA
CCAAATACTGGGTGCATCCGGACAACGTGACGGAGCTGAAGCTCATCATCCTCAAGCACCTGCCCGTTCTCGTCT
TCAACGCCGGCAAGGCATTCGAGCAGCAGGACTCGGCCATCACGTCCATCTACTACGACAATCCCGACAGCTGGG
ACCTGTACGAGGGCCGGCTGAAGAAGACGGAGGGCGCCGAGGCCATCCGTCTCCGCTGGTACGGCGGCATGCAGA
CCGAGAACATCTTTGTCGAGCGCAAGACTCACCGCGAGGACTGGACGGGCGAGAAGTCGGTCAAGGCCCGCTTCT
CCATCAAGGAGAAGAATGTCAATGCCTACCTCAGGGGCGAGCTGCTCCCCGCCGCCATGTTCGAAAAGGCCCGTA
GAGAGGGCCGCAAGTCGGAAAAAGCCATCGCCGAGGACGAGAGGCTGGCGTCGGAGATCCAGTACGCGGTCCTGG
CCAAGGGCTATCGACCCGTCTGCCGCTCCTTTTACAACCGAACCGCCTTCCAGCTCCCGGCCGACGCCCGGGTTC
GCATCTCGCTCGACACCGAGCTGACCATGATCCGCGAAGACAACCTCGACGGCCGGAGCCGCTGCGGCGACAACT
GGCGCCGGATGGACATTGGCATCGACTATCCCTTCGCCCAACTAGCCCCCGAAGACATCGTCCGCTTCCCCTACG
CCGTCCTCGAGGTCAAGCTCCAGACGCAGCTGGGACAGGAGCCCCCGGCTTGGGTACGACAGCTCATCTCGTCAC
ACCTGGTCGAGGCGGTGCCCAAGTTCTCCAAGTTCATCCACGGCGCGGCCTGCCTGTTCCCGGACCGGATTCACC
TGCTGCCGTTCTGGATGCCGCAGATGGATGTTGATATTCGTAAGCCCGTCACGCACGATTTCGGCATCCGCCGGA
GACCCGGAACGGCGGGAACGACGACGACGTCGTCCGAGGACGACGAGGATCTGGACTCGGACGTAGACGACAACG
CCGCCGCCAACAGCGGAGAGAGGCCAGGCCGGCCCTCGAGCGCCCCGCAACCGGCCGCCGCCGCCGTCACGGGTC
GGGCTTCGACGAACGGGGGGGCCGACACCGAGGGCCAGACGACAGACGGCGTAGCAGCCGACGACGACGACTACC
CCATCTACGACTCGGACGACGAGTACGACGAAAACTACGCGCTCGAGGAGGCACGACGCGTCGGCGGCTGGCACT
ACTACTCGATCCTAGTCGCCACCAAAGGCCGAGCCCTGGGCCGCGGCGCCATCAGCGTGGCCAAGAGGTTGACTC
CCGGTCCTCGACCGTCTCGCATCCCGCCCACGCAGCGTCACCAGATGCTCTTCGGCTCCGAGGCCGTGCAGCAGA
GGAAGTTTCGCGCGCCGCCGGGCAAGAAGATTTACGTGCCGGTGCGGGTCGAGCCCAAGGTTTACTTTGCCGCCG
AGCGGACCTTTCTCGGATGGGTGAGTTTTTTCTCTTGTGTTCCCTAAATTTATTTTATTTTATTTATTTATATCT
TTGGCCCCCTTCTTTTTTTTCATCATACTGATGAAGTATCCGTGACAGCTCGAGTATTCCATCTACATCGGCGCC
ATCGCCGTCACGCTCCTCAACTTCGGATCGCAGACGTCGTCGCCATCATTCTGGACGGCGGCCGTCTTCACCCTC
CTCGCCATCCTGAGCTTGGCCTACTCGGTCACCATCTATCTCTATCGAAGCCGGGCGATTCGCAAACGGACCGCC
GCCAAGTATTACGATAGGTGGGGGCCGTCGGTCTTATGCCTCGCCCTCTTCGTCGCCGTGGCAATGAATTTTGCC
TTTTCCGGACGTGAGAGGGGCGTGTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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