Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1313
Gene name
Locationscaffold_143:17294..18413
Strand+
Gene length (bp)1119
Transcript length (bp)1119
Coding sequence length (bp)1116
Protein length (aa) 372

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04488 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif 1.6E-06 172 205

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 13 32 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1313
MSPRRTRILRPTALLLLLLLLTIAILIIPLYYHRHYDDRDKSFKAPWSQAKDQQRIFRPQHMVKAPMVQPLESSP
PEQANAIPDRAHFVYMMSQPEAELGLEFSQALCVFAARYYWRPRQMFLHTNAVDDAIARARNGQSGKWSRLVLGL
PEMTVHRVELPIKADNGVEIRKMEHKSDFVRVKAVRDYGGVYLDFDAHLLRDIRPLLRAGFNAVGGRQANELLVS
GSFMAKKSATLVNWWYEEMHRVFDGRWTTHSNELMTRIGTSLVPHAGEMLILDRAALAPGGWSKPDCRTLFQSHD
YSHPSWLQDYSDTYVLHAFSPRRFHYRIKGFSDITPRYVLSNRSNFALAVFPVAKYMLDQGLIDVDDSHLGI
Coding >Ophio5|1313
ATGTCGCCAAGACGGACCAGAATCCTTCGGCCAACAGCCCTCCTCCTCCTCCTCCTCCTCCTCACCATAGCGATA
CTCATCATCCCACTCTATTACCACCGTCACTATGACGACCGAGACAAGTCGTTCAAAGCGCCCTGGTCACAAGCC
AAAGACCAGCAACGCATCTTCCGGCCACAACACATGGTGAAGGCACCCATGGTGCAGCCGCTGGAGAGCAGCCCG
CCAGAGCAGGCCAACGCGATCCCCGACCGAGCTCACTTCGTCTACATGATGTCTCAGCCAGAGGCCGAGCTTGGG
CTCGAATTCAGCCAGGCGCTCTGCGTCTTCGCCGCCCGCTACTACTGGCGTCCGCGTCAGATGTTTCTCCACACC
AACGCCGTCGACGACGCCATCGCCCGGGCCCGGAACGGTCAGTCCGGCAAGTGGAGTCGGCTCGTTCTCGGCCTT
CCGGAGATGACGGTCCATCGGGTCGAGCTCCCGATCAAGGCCGACAACGGAGTCGAGATCCGCAAAATGGAGCAC
AAGTCGGACTTTGTGCGCGTCAAGGCTGTCCGTGACTATGGTGGCGTCTACCTCGACTTTGACGCTCATCTGCTT
CGCGACATCCGCCCTTTGCTCCGGGCCGGCTTCAACGCGGTGGGTGGGAGACAGGCAAACGAATTGCTCGTCAGC
GGATCTTTCATGGCCAAGAAGAGCGCTACCTTGGTCAATTGGTGGTATGAAGAGATGCATCGTGTCTTCGATGGA
CGCTGGACCACGCATAGCAATGAGCTCATGACCCGTATCGGCACCAGCCTCGTCCCCCATGCGGGCGAGATGCTC
ATTCTCGACCGCGCTGCCCTGGCGCCGGGTGGCTGGTCCAAGCCTGATTGCCGGACGCTCTTCCAGTCGCATGAC
TACAGCCATCCATCTTGGCTTCAAGACTACTCTGACACGTATGTCCTGCACGCCTTTAGCCCGCGCCGCTTCCAC
TACCGAATCAAAGGCTTCAGTGACATCACTCCTCGCTATGTCCTCTCCAACCGGAGCAACTTTGCCCTCGCCGTC
TTCCCTGTTGCCAAGTATATGCTGGATCAGGGCTTGATTGACGTGGACGACTCTCATCTGGGTATA
Transcript >Ophio5|1313
ATGTCGCCAAGACGGACCAGAATCCTTCGGCCAACAGCCCTCCTCCTCCTCCTCCTCCTCCTCACCATAGCGATA
CTCATCATCCCACTCTATTACCACCGTCACTATGACGACCGAGACAAGTCGTTCAAAGCGCCCTGGTCACAAGCC
AAAGACCAGCAACGCATCTTCCGGCCACAACACATGGTGAAGGCACCCATGGTGCAGCCGCTGGAGAGCAGCCCG
CCAGAGCAGGCCAACGCGATCCCCGACCGAGCTCACTTCGTCTACATGATGTCTCAGCCAGAGGCCGAGCTTGGG
CTCGAATTCAGCCAGGCGCTCTGCGTCTTCGCCGCCCGCTACTACTGGCGTCCGCGTCAGATGTTTCTCCACACC
AACGCCGTCGACGACGCCATCGCCCGGGCCCGGAACGGTCAGTCCGGCAAGTGGAGTCGGCTCGTTCTCGGCCTT
CCGGAGATGACGGTCCATCGGGTCGAGCTCCCGATCAAGGCCGACAACGGAGTCGAGATCCGCAAAATGGAGCAC
AAGTCGGACTTTGTGCGCGTCAAGGCTGTCCGTGACTATGGTGGCGTCTACCTCGACTTTGACGCTCATCTGCTT
CGCGACATCCGCCCTTTGCTCCGGGCCGGCTTCAACGCGGTGGGTGGGAGACAGGCAAACGAATTGCTCGTCAGC
GGATCTTTCATGGCCAAGAAGAGCGCTACCTTGGTCAATTGGTGGTATGAAGAGATGCATCGTGTCTTCGATGGA
CGCTGGACCACGCATAGCAATGAGCTCATGACCCGTATCGGCACCAGCCTCGTCCCCCATGCGGGCGAGATGCTC
ATTCTCGACCGCGCTGCCCTGGCGCCGGGTGGCTGGTCCAAGCCTGATTGCCGGACGCTCTTCCAGTCGCATGAC
TACAGCCATCCATCTTGGCTTCAAGACTACTCTGACACGTATGTCCTGCACGCCTTTAGCCCGCGCCGCTTCCAC
TACCGAATCAAAGGCTTCAGTGACATCACTCCTCGCTATGTCCTCTCCAACCGGAGCAACTTTGCCCTCGCCGTC
TTCCCTGTTGCCAAGTATATGCTGGATCAGGGCTTGATTGACGTGGACGACTCTCATCTGGGTATATGA
Gene >Ophio5|1313
ATGTCGCCAAGACGGACCAGAATCCTTCGGCCAACAGCCCTCCTCCTCCTCCTCCTCCTCCTCACCATAGCGATA
CTCATCATCCCACTCTATTACCACCGTCACTATGACGACCGAGACAAGTCGTTCAAAGCGCCCTGGTCACAAGCC
AAAGACCAGCAACGCATCTTCCGGCCACAACACATGGTGAAGGCACCCATGGTGCAGCCGCTGGAGAGCAGCCCG
CCAGAGCAGGCCAACGCGATCCCCGACCGAGCTCACTTCGTCTACATGATGTCTCAGCCAGAGGCCGAGCTTGGG
CTCGAATTCAGCCAGGCGCTCTGCGTCTTCGCCGCCCGCTACTACTGGCGTCCGCGTCAGATGTTTCTCCACACC
AACGCCGTCGACGACGCCATCGCCCGGGCCCGGAACGGTCAGTCCGGCAAGTGGAGTCGGCTCGTTCTCGGCCTT
CCGGAGATGACGGTCCATCGGGTCGAGCTCCCGATCAAGGCCGACAACGGAGTCGAGATCCGCAAAATGGAGCAC
AAGTCGGACTTTGTGCGCGTCAAGGCTGTCCGTGACTATGGTGGCGTCTACCTCGACTTTGACGCTCATCTGCTT
CGCGACATCCGCCCTTTGCTCCGGGCCGGCTTCAACGCGGTGGGTGGGAGACAGGCAAACGAATTGCTCGTCAGC
GGATCTTTCATGGCCAAGAAGAGCGCTACCTTGGTCAATTGGTGGTATGAAGAGATGCATCGTGTCTTCGATGGA
CGCTGGACCACGCATAGCAATGAGCTCATGACCCGTATCGGCACCAGCCTCGTCCCCCATGCGGGCGAGATGCTC
ATTCTCGACCGCGCTGCCCTGGCGCCGGGTGGCTGGTCCAAGCCTGATTGCCGGACGCTCTTCCAGTCGCATGAC
TACAGCCATCCATCTTGGCTTCAAGACTACTCTGACACGTATGTCCTGCACGCCTTTAGCCCGCGCCGCTTCCAC
TACCGAATCAAAGGCTTCAGTGACATCACTCCTCGCTATGTCCTCTCCAACCGGAGCAACTTTGCCCTCGCCGTC
TTCCCTGTTGCCAAGTATATGCTGGATCAGGGCTTGATTGACGTGGACGACTCTCATCTGGGTATATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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