Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1293
Gene name
Locationscaffold_142:2727..4676
Strand+
Gene length (bp)1949
Transcript length (bp)1764
Coding sequence length (bp)1761
Protein length (aa) 587

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07732 Cu-oxidase_3 Multicopper oxidase 4.9E-41 81 195
PF00394 Cu-oxidase Multicopper oxidase 1.3E-37 206 343
PF07731 Cu-oxidase_2 Multicopper oxidase 1.0E-28 443 551

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q96WM9|LAC2_BOTFU Laccase-2 OS=Botryotinia fuckeliana GN=lcc2 PE=2 SV=1 53 587 3.0E-109
sp|Q12570|LAC1_BOTFU Laccase-1 OS=Botryotinia fuckeliana GN=lcc1 PE=2 SV=3 53 587 3.0E-90
sp|P78722|LAC2_PODAS Laccase-2 OS=Podospora anserina GN=LAC2 PE=2 SV=1 10 587 2.0E-86
sp|Q96UM2|LAC3_BOTFU Laccase-3 (Fragment) OS=Botryotinia fuckeliana GN=lcc3 PE=3 SV=1 101 548 5.0E-85
sp|P06811|LAC1_NEUCR Laccase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=lacc PE=1 SV=3 56 587 1.0E-83
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q96WM9|LAC2_BOTFU Laccase-2 OS=Botryotinia fuckeliana GN=lcc2 PE=2 SV=1 53 587 3.0E-109
sp|Q12570|LAC1_BOTFU Laccase-1 OS=Botryotinia fuckeliana GN=lcc1 PE=2 SV=3 53 587 3.0E-90
sp|P78722|LAC2_PODAS Laccase-2 OS=Podospora anserina GN=LAC2 PE=2 SV=1 10 587 2.0E-86
sp|Q96UM2|LAC3_BOTFU Laccase-3 (Fragment) OS=Botryotinia fuckeliana GN=lcc3 PE=3 SV=1 101 548 5.0E-85
sp|P06811|LAC1_NEUCR Laccase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=lacc PE=1 SV=3 56 587 1.0E-83
sp|Q03966|LAC1_CRYPA Laccase OS=Cryphonectria parasitica GN=LAC-1 PE=3 SV=1 55 587 2.0E-83
sp|D4APX3|LAC1_ARTBC Laccase ARB_05828 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05828 PE=1 SV=1 57 574 7.0E-83
sp|Q70KY3|LAC1_MELAO Laccase-1 OS=Melanocarpus albomyces GN=LAC1 PE=1 SV=1 1 587 1.0E-78
sp|Q99055|LAC4_TRAVI Laccase-4 OS=Trametes villosa GN=LCC4 PE=3 SV=1 76 566 3.0E-65
sp|Q12719|LAC4_TRAVE Laccase-4 OS=Trametes versicolor GN=LCC4 PE=3 SV=1 76 566 4.0E-65
sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1 72 565 1.0E-60
sp|Q01679|LAC1_PHLRA Laccase OS=Phlebia radiata GN=LAC PE=1 SV=2 76 560 3.0E-59
sp|Q12541|LAC1_AGABI Laccase-1 OS=Agaricus bisporus GN=lcc1 PE=1 SV=1 73 549 2.0E-58
sp|O59896|LAC1_PYCCI Laccase OS=Pycnoporus cinnabarinus GN=LCC3-1 PE=1 SV=1 76 544 6.0E-58
sp|P56193|LAC1_THACU Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 SV=1 74 340 1.0E-57
sp|P37064|ASO_CUCPM L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1 72 558 1.0E-57
sp|Q02079|LAC3_THACU Laccase-3 OS=Thanatephorus cucumeris GN=LCC3 PE=2 SV=1 74 340 7.0E-57
sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 72 558 3.0E-56
sp|Q99056|LAC5_TRAVI Laccase-5 OS=Trametes villosa GN=LCC5 PE=3 SV=2 76 544 4.0E-56
sp|Q02075|LAC2_THACU Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 SV=1 72 343 4.0E-56
sp|Q02081|LAC4_THACU Laccase-4 OS=Thanatephorus cucumeris GN=LCC4 PE=1 SV=1 67 542 7.0E-56
sp|Q12717|LAC5_TRAVE Laccase-5 OS=Trametes versicolor GN=LCC5 PE=2 SV=1 76 571 2.0E-55
sp|Q12542|LAC2_AGABI Laccase-2 OS=Agaricus bisporus GN=lcc2 PE=1 SV=1 73 548 3.0E-55
sp|Q40588|ASO_TOBAC L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1 73 558 1.0E-51
sp|Q12718|LAC2_TRAVE Laccase-2 OS=Trametes versicolor GN=LCC2 PE=1 SV=1 84 578 1.0E-49
sp|Q99044|LAC1_TRAVI Laccase-1 OS=Trametes villosa GN=LCC1 PE=3 SV=1 76 341 1.0E-49
sp|Q99046|LAC2_TRAVI Laccase-2 OS=Trametes villosa GN=LCC2 PE=3 SV=1 84 578 3.0E-49
sp|Q2QUN2|LAC24_ORYSJ Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC24 PE=2 SV=1 90 553 4.0E-49
sp|D0VWU3|LAC1_TRAMX Laccase OS=Trametes maxima PE=1 SV=1 76 341 6.0E-49
sp|Q09920|FIO1_SCHPO Iron transport multicopper oxidase fio1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fio1 PE=3 SV=1 73 568 6.0E-48
sp|Q02497|LAC1_TRAHI Laccase OS=Trametes hirsuta PE=1 SV=1 76 341 2.0E-46
sp|Q12729|LAC1_PLEOS Laccase-1 OS=Pleurotus ostreatus GN=POX1 PE=2 SV=1 76 568 6.0E-46
sp|Q2RBK2|LAC17_ORYSJ Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1 75 561 8.0E-46
sp|Q2QYS3|LAC23_ORYSJ Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=3 SV=1 75 561 2.0E-45
sp|P38993|FET3_YEAST Iron transport multicopper oxidase FET3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FET3 PE=1 SV=2 73 539 6.0E-45
sp|Q941X2|LAC3_ORYSJ Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1 72 568 2.0E-44
sp|O81081|LAC2_ARATH Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1 61 561 2.0E-44
sp|Q5N7B4|LAC7_ORYSJ Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1 74 561 2.0E-43
sp|P43561|FET5_YEAST Iron transport multicopper oxidase FET5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FET5 PE=1 SV=1 51 557 4.0E-43
sp|Q6ID18|LAC10_ARATH Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1 70 561 8.0E-42
sp|Q6CII3|FET3_KLULA Iron transport multicopper oxidase FET3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=FET3 PE=3 SV=1 82 583 1.0E-41
sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 70 561 5.0E-41
sp|O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2 67 548 8.0E-41
sp|Q99049|LAC3_TRAVI Laccase-3 OS=Trametes villosa GN=LCC3 PE=3 SV=1 76 341 1.0E-40
sp|Q12739|LAC2_PLEOS Laccase-2 OS=Pleurotus ostreatus GN=POX2 PE=1 SV=1 84 341 5.0E-40
sp|Q0JHP8|LAC8_ORYSJ Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 PE=3 SV=2 97 548 4.0E-39
sp|P78591|FET3_CANAX Iron transport multicopper oxidase FET3 OS=Candida albicans GN=FET3 PE=3 SV=1 86 557 8.0E-39
sp|Q96WT3|FET3_CANGA Iron transport multicopper oxidase FET3 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=FET3 PE=3 SV=1 87 544 8.0E-39
sp|Q5N9W4|LAC5_ORYSJ Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1 70 561 2.0E-38
sp|Q9FY79|LAC14_ARATH Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1 92 561 3.0E-38
sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 72 548 5.0E-38
sp|Q5N7A3|LAC6_ORYSJ Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1 96 338 1.0E-36
sp|Q56YT0|LAC3_ARATH Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2 91 340 3.0E-36
sp|Q5ZCW1|LAC1_ORYSJ Putative laccase-1 OS=Oryza sativa subsp. japonica GN=LAC1 PE=3 SV=1 73 563 3.0E-36
sp|Q9FLB5|LAC12_ARATH Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1 72 369 7.0E-36
sp|Q0IP28|LAC25_ORYSJ Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=3 SV=1 96 341 4.0E-35
sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1 67 341 1.0E-34
sp|Q9SIY8|LAC5_ARATH Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1 75 340 1.0E-34
sp|Q6Z8L2|LAC9_ORYSJ Putative laccase-9 OS=Oryza sativa subsp. japonica GN=LAC9 PE=3 SV=1 73 351 7.0E-34
sp|Q9LYQ2|LAC13_ARATH Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1 72 341 4.0E-33
sp|Q9SR40|LAC7_ARATH Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1 72 341 2.0E-32
sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 71 368 1.0E-31
sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1 66 328 1.0E-31
sp|Q2QZ80|LAC21_ORYSJ Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC21 PE=2 SV=1 73 366 5.0E-31
sp|Q84J37|LAC15_ARATH Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV=1 71 340 6.0E-31
sp|Q9LFD2|LAC8_ARATH Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1 84 384 1.0E-30
sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1 70 404 7.0E-30
sp|Q9LFD1|LAC9_ARATH Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1 69 338 1.0E-29
sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 70 329 4.0E-29
sp|Q0DHL5|LAC11_ORYSJ Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2 96 329 2.0E-28
sp|Q9ZPY2|LAC6_ARATH Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=1 42 338 4.0E-28
sp|Q10ND7|LAC10_ORYSJ Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1 73 335 5.0E-28
sp|Q69L99|LAC14_ORYSJ Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC14 PE=3 SV=1 70 329 1.0E-27
sp|Q9LMS3|LAC1_ARATH Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1 73 376 1.0E-27
sp|Q04399|GMC1_YEAST Putative multicopper oxidase GMC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GMC1 PE=1 SV=1 68 554 1.0E-27
sp|I6WZK7|MMCO_MYCTU Multicopper oxidase MmcO OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmcO PE=1 SV=1 9 548 1.0E-26
sp|Q53LU4|LAC18_ORYSJ Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC18 PE=2 SV=1 95 345 4.0E-26
sp|A2XCN6|LAC18_ORYSI Putative laccase-18 OS=Oryza sativa subsp. indica GN=LAC18 PE=3 SV=1 95 345 4.0E-26
sp|Q2R0L2|LAC19_ORYSJ Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC19 PE=2 SV=1 95 345 3.0E-25
sp|A2Y9C5|LAC19_ORYSI Putative laccase-19 OS=Oryza sativa subsp. indica GN=LAC19 PE=3 SV=1 95 345 4.0E-25
sp|Q2R0L0|LAC20_ORYSJ Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC20 PE=2 SV=1 92 345 6.0E-25
sp|Q7XE50|LAC16_ORYSJ Putative laccase-16 OS=Oryza sativa subsp. japonica GN=LAC16 PE=5 SV=1 131 563 7.0E-25
sp|Q339K6|LAC15_ORYSJ Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1 74 331 8.0E-25
sp|A2Y9C2|LAC20_ORYSI Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 PE=3 SV=1 92 338 1.0E-24
sp|P59571|COPA_PSESM Copper resistance protein A homolog OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=copA PE=3 SV=1 74 547 6.0E-24
sp|P17489|LAC1_EMENI Laccase-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=yA PE=2 SV=3 51 552 4.0E-23
sp|Q9SU40|SKU5_ARATH Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1 75 493 6.0E-23
sp|P12374|COPA_PSEUB Copper resistance protein A OS=Pseudomonas syringae pv. tomato GN=copA PE=1 SV=1 74 328 2.0E-22
sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1 75 494 2.0E-22
sp|Q47452|PCOA_ECOLX Copper resistance protein A OS=Escherichia coli GN=pcoA PE=3 SV=1 75 332 3.0E-22
sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1 79 341 2.0E-20
sp|Q9FHN6|SKS2_ARATH Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1 74 399 4.0E-20
sp|Q8VXX5|SKS1_ARATH Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1 74 363 3.0E-18
sp|Q9LFD2|LAC8_ARATH Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1 448 569 5.0E-12
sp|Q9SR40|LAC7_ARATH Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1 429 550 3.0E-11
sp|Q9LFD1|LAC9_ARATH Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1 448 569 3.0E-11
sp|Q69HT9|MCO_STAAU Multicopper oxidase mco OS=Staphylococcus aureus GN=mco PE=1 SV=2 93 344 3.0E-11
sp|Q6GIX3|MCO_STAAR Multicopper oxidase mco OS=Staphylococcus aureus (strain MRSA252) GN=mco PE=3 SV=2 93 344 3.0E-11
sp|Q5N7A3|LAC6_ORYSJ Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1 461 548 1.0E-10
sp|Q69L99|LAC14_ORYSJ Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC14 PE=3 SV=1 461 548 6.0E-10
sp|Q4LAB0|MCO_STAHJ Multicopper oxidase mco OS=Staphylococcus haemolyticus (strain JCSC1435) GN=mco PE=3 SV=2 93 241 3.0E-09
sp|Q0IP28|LAC25_ORYSJ Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=3 SV=1 452 561 4.0E-09
sp|Q10ND7|LAC10_ORYSJ Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1 461 561 4.0E-09
sp|Q9SIY8|LAC5_ARATH Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1 470 561 5.0E-09
sp|Q8CQF6|MCO_STAES Multicopper oxidase mco OS=Staphylococcus epidermidis (strain ATCC 12228) GN=mco PE=3 SV=2 93 241 5.0E-09
sp|Q9FLB5|LAC12_ARATH Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1 462 561 9.0E-09
sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 461 561 3.0E-08
sp|Q84J37|LAC15_ARATH Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV=1 453 562 4.0E-08
sp|Q2R0L0|LAC20_ORYSJ Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC20 PE=2 SV=1 431 548 5.0E-08
sp|Q6Z8L2|LAC9_ORYSJ Putative laccase-9 OS=Oryza sativa subsp. japonica GN=LAC9 PE=3 SV=1 462 563 8.0E-08
sp|Q2QZ80|LAC21_ORYSJ Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC21 PE=2 SV=1 462 563 1.0E-07
sp|Q53LU4|LAC18_ORYSJ Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC18 PE=2 SV=1 473 548 1.0E-07
sp|A2XCN6|LAC18_ORYSI Putative laccase-18 OS=Oryza sativa subsp. indica GN=LAC18 PE=3 SV=1 473 548 1.0E-07
sp|Q2R0L2|LAC19_ORYSJ Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC19 PE=2 SV=1 461 548 1.0E-07
sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1 461 568 2.0E-07
sp|A2Y9C5|LAC19_ORYSI Putative laccase-19 OS=Oryza sativa subsp. indica GN=LAC19 PE=3 SV=1 461 548 2.0E-07
sp|Q02075|LAC2_THACU Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 SV=1 472 571 4.0E-07
sp|Q56YT0|LAC3_ARATH Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2 461 568 4.0E-07
sp|Q9LYQ2|LAC13_ARATH Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1 462 568 4.0E-07
sp|Q0DHL5|LAC11_ORYSJ Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2 461 561 4.0E-07
sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1 473 544 8.0E-07
sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1 473 561 2.0E-06
sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 461 561 2.0E-06
sp|Q339K6|LAC15_ORYSJ Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1 473 561 2.0E-06
sp|P56193|LAC1_THACU Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 SV=1 471 583 4.0E-06
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GO

GO Term Description Terminal node
GO:0005507 copper ion binding Yes
GO:0016491 oxidoreductase activity Yes
GO:0046914 transition metal ion binding No
GO:0046872 metal ion binding No
GO:0005488 binding No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0043169 cation binding No
GO:0043167 ion binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 45 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1293
MVLAANSLQPRAVIVENRLPQQRTNGRSLLGTLLAPVLPFFLSSNPLPNGFPWSTLNLNTNYYRDHPRTGVIRSY
DFTVSRNFIAPDGYQQETLLVNGAFPGPRIEANWGDTIQVTVRNNITGPEEGVALHWHGFLQHGKPWEDGVPAVT
QCPIAPGKSFTYQFEAELYGSTWYHSHYSSQYAAGLVGPITIYGPRQRSYDVDLGPVMLSDWYHKKYYDLVKQSM
TPNSPPIGSDNILINGKGNFDCTKRAAGDTTPCVSDAGISKFKFQRGKTHRLRLINAGAEALMRFSIDGHKMTVI
ANDFVPVEPYDTEVVTLGIGQRTDVLVKADGKLDAYWMRANVSVPCSLAAITQGLAAVYYDQTNDTKTPQSVAWD
RPDPGTCANDDLNKTRPYMKLRLPQPDRTYNFDVSVFRNDSGVTLWKLGNTTYRGNYNSPTLLLSALGNFTFQEE
WNVQNTQDARSVRVIVRNRSPVAHPMHLHGFNMYILHEGEGDWDGSIIHPENPQRRDVMMLRKNGHLVMQFDASE
NPGVWPFHCHIAWHSGAGFLTQFTTGATALKKLRPPNVVAETCRQWATWTHTNIPDQIDSGL
Coding >Ophio5|1293
ATGGTTCTTGCGGCCAACTCGCTCCAGCCGCGGGCCGTGATTGTCGAGAACAGGCTTCCGCAGCAGAGGACCAAC
GGGAGGTCGCTGCTCGGAACTCTGCTCGCTCCGGTGCTGCCATTCTTTCTCAGCAGCAACCCGCTGCCCAACGGC
TTCCCCTGGAGCACGCTTAACCTCAATACCAACTACTATCGCGATCACCCGCGCACAGGCGTCATCCGCAGCTAC
GACTTCACCGTCAGCCGGAATTTCATCGCGCCGGATGGCTACCAGCAGGAGACGCTTCTCGTCAACGGGGCCTTT
CCCGGCCCCCGAATCGAGGCCAACTGGGGTGACACGATTCAGGTGACGGTGCGTAACAACATCACCGGTCCGGAG
GAGGGTGTCGCCCTGCACTGGCATGGCTTCTTGCAGCATGGCAAACCGTGGGAGGACGGCGTTCCGGCCGTGACG
CAGTGCCCGATTGCGCCGGGCAAGTCGTTTACCTACCAGTTCGAAGCCGAGCTCTATGGAAGCACCTGGTACCAC
AGCCACTACTCTTCGCAATATGCTGCCGGCCTGGTTGGCCCCATCACGATTTACGGACCTCGCCAACGCAGTTAC
GACGTCGATCTCGGCCCGGTGATGCTCTCGGACTGGTATCACAAGAAATACTATGACCTGGTCAAACAGTCGATG
ACACCCAACAGCCCGCCCATTGGCTCCGACAACATCCTCATCAACGGCAAAGGCAACTTTGACTGCACGAAGCGA
GCGGCAGGCGACACGACGCCCTGCGTTAGCGACGCGGGCATCTCCAAGTTCAAGTTCCAGCGGGGCAAAACGCAC
CGGCTGCGGCTCATCAACGCCGGCGCCGAGGCTCTGATGCGCTTCTCCATCGACGGGCACAAGATGACGGTCATC
GCAAACGACTTCGTCCCCGTCGAGCCCTACGACACCGAGGTGGTGACGCTCGGCATCGGTCAGCGCACCGACGTG
CTGGTCAAGGCCGACGGCAAGCTCGACGCCTACTGGATGCGCGCAAACGTCTCTGTGCCTTGCAGTCTCGCCGCT
ATCACTCAGGGGCTCGCGGCCGTCTACTATGACCAGACCAACGATACCAAGACGCCGCAGTCGGTGGCCTGGGAC
CGGCCGGACCCGGGCACCTGTGCCAACGACGACCTCAACAAGACCAGGCCGTACATGAAGCTGAGGCTGCCGCAG
CCGGACCGGACCTACAACTTTGACGTCAGCGTCTTCCGCAACGACAGCGGCGTCACCCTCTGGAAGCTCGGCAAT
ACGACCTACCGTGGCAACTATAACAGTCCGACCTTGCTGCTCTCCGCATTGGGCAACTTTACCTTCCAGGAGGAG
TGGAACGTGCAGAACACGCAAGACGCACGCAGTGTCCGGGTCATTGTCAGGAACCGCTCTCCCGTTGCACACCCA
ATGCATCTCCACGGCTTCAACATGTACATCCTGCATGAGGGCGAGGGCGACTGGGACGGAAGCATCATCCACCCG
GAGAACCCACAGCGCAGGGACGTCATGATGCTACGCAAGAACGGCCATCTGGTGATGCAGTTCGACGCTTCCGAG
AACCCCGGCGTCTGGCCTTTCCACTGCCACATCGCCTGGCATTCGGGAGCCGGATTCCTAACCCAGTTCACGACG
GGCGCCACGGCCCTCAAGAAGCTGCGGCCTCCCAACGTCGTGGCCGAGACGTGTCGACAGTGGGCTACCTGGACG
CACACCAATATCCCCGACCAGATCGATAGCGGGCTT
Transcript >Ophio5|1293
ATGGTTCTTGCGGCCAACTCGCTCCAGCCGCGGGCCGTGATTGTCGAGAACAGGCTTCCGCAGCAGAGGACCAAC
GGGAGGTCGCTGCTCGGAACTCTGCTCGCTCCGGTGCTGCCATTCTTTCTCAGCAGCAACCCGCTGCCCAACGGC
TTCCCCTGGAGCACGCTTAACCTCAATACCAACTACTATCGCGATCACCCGCGCACAGGCGTCATCCGCAGCTAC
GACTTCACCGTCAGCCGGAATTTCATCGCGCCGGATGGCTACCAGCAGGAGACGCTTCTCGTCAACGGGGCCTTT
CCCGGCCCCCGAATCGAGGCCAACTGGGGTGACACGATTCAGGTGACGGTGCGTAACAACATCACCGGTCCGGAG
GAGGGTGTCGCCCTGCACTGGCATGGCTTCTTGCAGCATGGCAAACCGTGGGAGGACGGCGTTCCGGCCGTGACG
CAGTGCCCGATTGCGCCGGGCAAGTCGTTTACCTACCAGTTCGAAGCCGAGCTCTATGGAAGCACCTGGTACCAC
AGCCACTACTCTTCGCAATATGCTGCCGGCCTGGTTGGCCCCATCACGATTTACGGACCTCGCCAACGCAGTTAC
GACGTCGATCTCGGCCCGGTGATGCTCTCGGACTGGTATCACAAGAAATACTATGACCTGGTCAAACAGTCGATG
ACACCCAACAGCCCGCCCATTGGCTCCGACAACATCCTCATCAACGGCAAAGGCAACTTTGACTGCACGAAGCGA
GCGGCAGGCGACACGACGCCCTGCGTTAGCGACGCGGGCATCTCCAAGTTCAAGTTCCAGCGGGGCAAAACGCAC
CGGCTGCGGCTCATCAACGCCGGCGCCGAGGCTCTGATGCGCTTCTCCATCGACGGGCACAAGATGACGGTCATC
GCAAACGACTTCGTCCCCGTCGAGCCCTACGACACCGAGGTGGTGACGCTCGGCATCGGTCAGCGCACCGACGTG
CTGGTCAAGGCCGACGGCAAGCTCGACGCCTACTGGATGCGCGCAAACGTCTCTGTGCCTTGCAGTCTCGCCGCT
ATCACTCAGGGGCTCGCGGCCGTCTACTATGACCAGACCAACGATACCAAGACGCCGCAGTCGGTGGCCTGGGAC
CGGCCGGACCCGGGCACCTGTGCCAACGACGACCTCAACAAGACCAGGCCGTACATGAAGCTGAGGCTGCCGCAG
CCGGACCGGACCTACAACTTTGACGTCAGCGTCTTCCGCAACGACAGCGGCGTCACCCTCTGGAAGCTCGGCAAT
ACGACCTACCGTGGCAACTATAACAGTCCGACCTTGCTGCTCTCCGCATTGGGCAACTTTACCTTCCAGGAGGAG
TGGAACGTGCAGAACACGCAAGACGCACGCAGTGTCCGGGTCATTGTCAGGAACCGCTCTCCCGTTGCACACCCA
ATGCATCTCCACGGCTTCAACATGTACATCCTGCATGAGGGCGAGGGCGACTGGGACGGAAGCATCATCCACCCG
GAGAACCCACAGCGCAGGGACGTCATGATGCTACGCAAGAACGGCCATCTGGTGATGCAGTTCGACGCTTCCGAG
AACCCCGGCGTCTGGCCTTTCCACTGCCACATCGCCTGGCATTCGGGAGCCGGATTCCTAACCCAGTTCACGACG
GGCGCCACGGCCCTCAAGAAGCTGCGGCCTCCCAACGTCGTGGCCGAGACGTGTCGACAGTGGGCTACCTGGACG
CACACCAATATCCCCGACCAGATCGATAGCGGGCTTTGA
Gene >Ophio5|1293
ATGGTTCTTGCGGCCAACTCGCTCCAGCCGCGGGCCGTGATTGTCGAGAACAGGCTTCCGCAGCAGAGGACCAAC
GGGTTTTGTCTCCCTCCTTTCTTTACCGTCTTCACAAGTGCTTACAAGAAGTCGTAGGAGGTCGCTGCTCGGAAC
TCTGCTCGCTCCGGTGCTGCCATTCTTTCTCAGCAGCAACCCGCTGCCCAACGGCTTCCCCTGGAGCACGCTTAA
CCTCAATACCAACTACTATCGCGATCACCCGCGCACAGGCGTCATCCGCAGCTACGACTTCACCGTCAGCCGGAA
TTTCATCGCGCCGGATGGCTACCAGCAGGAGACGCTTCTCGTCAACGGGGCCTTTCCCGGCCCCCGAATCGAGGC
CAACTGGGGTGACACGATTCAGGTGACGGTGCGTAACAACATCACCGGTCCGGAGGAGGGTGTCGCCCTGCACTG
GCATGGCTTCTTGCAGCATGGCAAACCGTGGGAGGACGGCGTTCCGGCCGTGACGCAGTGCCCGATTGCGCCGGG
CAAGTCGTTTACCTACCAGTTCGAAGCCGAGCTCTATGGAAGGTAAATGACGAGTTGCTGCAGCGATGAGAGGCT
CCCATCAGCTAACAAGTCAAACAGCACCTGGTACCACAGCCACTACTCTTCGCAATATGCTGCCGGCCTGGTTGG
CCCCATCACGATTTACGGACCTCGCCAACGCAGTTACGACGTCGATCTCGGCCCGGTGATGCTCTCGGACTGGTA
TCACAAGAAATACTATGACCTGGTCAAACAGTCGATGACACCCAACAGCCCGCCCATTGGCTCCGACAACATCCT
CATCAACGGCAAAGGCAACTTTGACTGCACGAAGCGAGCGGCAGGCGACACGACGCCCTGCGTTAGCGACGCGGG
CATCTCCAAGTTCAAGTTCCAGCGGGGCAAAACGCACCGGCTGCGGCTCATCAACGCCGGCGCCGAGGCTCTGAT
GCGCTTCTCCATCGACGGGCACAAGATGACGGTCATCGCAAACGACTTCGTCCCCGTCGAGCCCTACGACACCGA
GGTGGTGACGCTCGGCATCGGTCAGCGCACCGACGTGCTGGTCAAGGCCGACGGCAAGCTCGACGCCTACTGGAT
GCGCGCAAACGTCTCTGTGCCTTGCAGTCTCGCCGCTATCACTCAGGGGCTCGCGGCCGTCTACTATGACCAGAC
CAACGATACCAAGACGCCGCAGTCGGTGGCCTGGGACCGGCCGGACCCGGGCACCTGTGCCAACGACGACCTCAA
CAAGACCAGGCCGTACATGAAGCTGAGGCTGCCGCAGCCGGACCGGACCTACAACTTTGACGTCAGCGTCTTCCG
CAACGACAGCGGCGTCACCCTCTGGAAGCTCGGCAATACGACCTACCGTGGCAACTATAACAGTCCGACCTTGCT
GCTCTCCGCATTGGGCAACTTTACCTTCCAGGAGGAGTGGAACGTGCAGAACACGCAAGACGCACGCAGTGTCCG
GGTCATTGTCAGGAACCGCTCTCCCGTTGCGTAAGGCTACTTTCCCCCCCCTCCCCCCCCTATTTGCAACCCCTG
AGAGAAAACTAACAAGCAAGCCGCACAGACACCCAATGCATCTCCACGGCTTCAACATGTACATCCTGCATGAGG
GCGAGGGCGACTGGGACGGAAGCATCATCCACCCGGAGAACCCACAGCGCAGGGACGTCATGATGCTACGCAAGA
ACGGCCATCTGGTGATGCAGTTCGACGCTTCCGAGAACCCCGGCGTCTGGCCTTTCCACTGCCACATCGCCTGGC
ATTCGGGAGCCGGATTCCTAACCCAGTTCACGACGGGCGCCACGGCCCTCAAGAAGCTGCGGCCTCCCAACGTCG
TGGCCGAGACGTGTCGACAGTGGGCTACCTGGACGCACACCAATATCCCCGACCAGATCGATAGCGGGCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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