© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|1286 |
| Gene name | |
| Location | scaffold_1412:1381..1695 |
| Strand | - |
| Gene length (bp) | 314 |
| Transcript length (bp) | 243 |
| Coding sequence length (bp) | 240 |
| Protein length (aa) | 80 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Transmembrane domain|Mitochondrial transit peptide | 0.3058 | 0.2506 | 0.1635 | 0.2257 | 0.6343 | 0.059 | 0.7038 | 0.3491 | 0.3541 | 0.061 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 26 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 15535 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|1286 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1286 MELFYLNYLYGYLASGAVFTILHRLFPARAVDDFVRQPETARQLQQHYRELWDDVSSEPSQASGALSFQGWWRKG NGPER |
| Coding | >Ophio5|1286 ATGGAGCTCTTTTACCTCAACTACCTGTACGGCTACCTGGCGAGCGGCGCCGTTTTCACCATTCTTCACCGGCTG TTCCCTGCCCGGGCCGTCGATGACTTCGTCCGGCAGCCGGAGACGGCGCGCCAGCTCCAGCAGCACTACCGAGAA CTGTGGGATGACGTATCGTCCGAGCCGAGCCAGGCCAGCGGTGCCCTCTCCTTTCAAGGTTGGTGGAGGAAGGGG AATGGTCCAGAGCGG |
| Transcript | >Ophio5|1286 ATGGAGCTCTTTTACCTCAACTACCTGTACGGCTACCTGGCGAGCGGCGCCGTTTTCACCATTCTTCACCGGCTG TTCCCTGCCCGGGCCGTCGATGACTTCGTCCGGCAGCCGGAGACGGCGCGCCAGCTCCAGCAGCACTACCGAGAA CTGTGGGATGACGTATCGTCCGAGCCGAGCCAGGCCAGCGGTGCCCTCTCCTTTCAAGGTTGGTGGAGGAAGGGG AATGGTCCAGAGCGGTAG |
| Gene | >Ophio5|1286 ATGGAGCTCTTTTACCTCAACTACCTGTACGGCTACCTGGCGAGCGGCGCCGTTTTCACCATTCTTCACCGGCTG TTCCCTGCCCGGGCCGTCGATGACTTCGTCCGGCAGCCGGAGACGGCGCGCCAGCTCCAGCAGCACTACCGAGAA CTGTGGGATGACGTATCGTCCGAGCCGAGCCAGGCCAGCGGTGCCCTCTCCTTTCAAGGCAAGGAACCGGACTCA AACTCGAAGGTTTCCAAGCCCAAGTGAGATTGACGAGCCAAGCTGTGGATATAGGTTGGTGGAGGAAGGGGAATG GTCCAGAGCGGTAG |