Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1279
Gene name
Locationscaffold_141:25402..26071
Strand-
Gene length (bp)669
Transcript length (bp)618
Coding sequence length (bp)615
Protein length (aa) 205

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12296 HsbA Hydrophobic surface binding protein A 6.8E-25 28 145

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9HFP8|MP1_ASPFM Cell wall mannoprotein 1 OS=Neosartorya fumigata GN=MP1 PE=1 SV=1 1 159 2.0E-12
sp|Q8TG42|MP1_ASPFL Cell wall mannoprotein 1 OS=Aspergillus flavus GN=mp1 PE=2 SV=1 6 159 1.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1279
MLLSHFLVSLTATLASAAVLKHRDDKPAISDALKAISRETEALGQAVSSWKGGLLGGVPIVAKSSSLFYSLKRGS
NIAQESKPLTEEETLAVASDTQDLVQKVTKTLDTLVQNKPKFESLWLTSIVRQAMEVEKAAADELIENVIAKVPK
NLQDVAKQIKDEDDEDDEDDESDESDESDKDGEDDDKDDDEECFVCVVRDRVGSH
Coding >Ophio5|1279
ATGCTTCTGTCACACTTTCTCGTGTCCCTGACGGCGACGCTCGCCAGTGCCGCCGTGCTCAAGCACAGAGACGAC
AAGCCCGCCATCAGCGACGCCCTCAAGGCCATCTCGCGCGAGACAGAGGCGCTCGGCCAGGCCGTGTCGTCTTGG
AAAGGAGGCCTTCTCGGCGGCGTGCCCATCGTGGCCAAGTCGAGCTCCCTGTTCTACTCGTTGAAGCGTGGCTCC
AATATTGCCCAAGAGTCGAAGCCGCTCACGGAGGAGGAGACGCTGGCGGTTGCGTCGGACACGCAGGACCTGGTG
CAGAAAGTGACCAAGACTCTTGACACGCTGGTCCAGAACAAGCCCAAGTTTGAAAGCCTCTGGCTCACGTCGATC
GTCCGTCAGGCCATGGAGGTGGAAAAGGCTGCGGCCGACGAGCTCATCGAAAACGTCATCGCCAAGGTGCCCAAG
AATCTGCAGGACGTGGCCAAGCAGATTAAGGACGAGGACGACGAGGACGACGAGGACGACGAGAGCGACGAGAGC
GACGAGAGCGACAAGGACGGTGAGGACGACGACAAGGACGATGATGAGGAATGCTTTGTTTGTGTTGTCAGGGAC
CGAGTAGGCTCGCAC
Transcript >Ophio5|1279
ATGCTTCTGTCACACTTTCTCGTGTCCCTGACGGCGACGCTCGCCAGTGCCGCCGTGCTCAAGCACAGAGACGAC
AAGCCCGCCATCAGCGACGCCCTCAAGGCCATCTCGCGCGAGACAGAGGCGCTCGGCCAGGCCGTGTCGTCTTGG
AAAGGAGGCCTTCTCGGCGGCGTGCCCATCGTGGCCAAGTCGAGCTCCCTGTTCTACTCGTTGAAGCGTGGCTCC
AATATTGCCCAAGAGTCGAAGCCGCTCACGGAGGAGGAGACGCTGGCGGTTGCGTCGGACACGCAGGACCTGGTG
CAGAAAGTGACCAAGACTCTTGACACGCTGGTCCAGAACAAGCCCAAGTTTGAAAGCCTCTGGCTCACGTCGATC
GTCCGTCAGGCCATGGAGGTGGAAAAGGCTGCGGCCGACGAGCTCATCGAAAACGTCATCGCCAAGGTGCCCAAG
AATCTGCAGGACGTGGCCAAGCAGATTAAGGACGAGGACGACGAGGACGACGAGGACGACGAGAGCGACGAGAGC
GACGAGAGCGACAAGGACGGTGAGGACGACGACAAGGACGATGATGAGGAATGCTTTGTTTGTGTTGTCAGGGAC
CGAGTAGGCTCGCACTGA
Gene >Ophio5|1279
ATGCTTCTGTCACACTTTCTCGTGTCCCTGACGGCGACGCTCGCCAGTGCCGCCGTGCTCAAGCACAGAGACGAC
AAGCCCGCCATCAGCGACGCCCTCAAGGCCATCTCGCGCGAGACAGAGGCGCTCGGCCAGGCCGTGTCGTCTTGG
AAAGGAGGCCTTCTCGGCGGCGTGCCCATCGTGGCCAAGTCGAGCTCCCTGTTCTACTCGTTGAAGCGTGGCTCC
AATATTGCCCAAGAGTCGAAGCCGCTCACGGAGGAGGAGACGCTGGCGGTTGCGTCGGACACGCAGGACCTGGTG
CAGAAAGTGACCAAGACTCTTGACACGCTGGTCCAGAACAAGCCCAAGTTTGAAAGCCTCTGGCTCACGTCGATC
GTCCGTCAGGCCATGGAGGTGGAAAAGGCTGCGGCCGACGAGCTCATCGAAAACGTCATCGCCAAGGTGCCCAAG
AATCTGCAGGACGTGGCCAAGCAGATTGTCAAGGGCATCCAAGACAGCTTCGCAAAGACGATCACGGCCTTCTCC
TAGAAGGACGAGGACGACGAGGACGACGAGGACGACGAGAGCGACGAGAGCGACGAGAGCGACAAGGACGGTGAG
GACGACGACAAGGACGATGATGAGGAATGCTTTGTTTGTGTTGTCAGGGACCGAGTAGGCTCGCACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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