© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|1239 |
| Gene name | |
| Location | scaffold_14:80029..81380 |
| Strand | + |
| Gene length (bp) | 1351 |
| Transcript length (bp) | 1008 |
| Coding sequence length (bp) | 1005 |
| Protein length (aa) | 335 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03114 | BAR | BAR domain | 2.5E-65 | 80 | 303 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UUM7|HOB3_SCHPO | Protein hob3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hob3 PE=1 SV=1 | 75 | 333 | 2.0E-138 |
| sp|P25343|RV161_YEAST | Reduced viability upon starvation protein 161 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RVS161 PE=1 SV=1 | 75 | 331 | 3.0E-99 |
| sp|Q5AFE4|RV161_CANAL | Regulator of cytoskeleton and endocytosis RVS161 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RVS161 PE=1 SV=1 | 75 | 332 | 4.0E-97 |
| sp|Q59PE4|RV162_CANAL | RVS161-like protein RVS162 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RVS162 PE=3 SV=1 | 75 | 333 | 7.0E-72 |
| sp|O74352|HOB1_SCHPO | Protein hob1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hob1 PE=1 SV=1 | 75 | 306 | 2.0E-26 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UUM7|HOB3_SCHPO | Protein hob3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hob3 PE=1 SV=1 | 75 | 333 | 2.0E-138 |
| sp|P25343|RV161_YEAST | Reduced viability upon starvation protein 161 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RVS161 PE=1 SV=1 | 75 | 331 | 3.0E-99 |
| sp|Q5AFE4|RV161_CANAL | Regulator of cytoskeleton and endocytosis RVS161 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RVS161 PE=1 SV=1 | 75 | 332 | 4.0E-97 |
| sp|Q59PE4|RV162_CANAL | RVS161-like protein RVS162 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RVS162 PE=3 SV=1 | 75 | 333 | 7.0E-72 |
| sp|O74352|HOB1_SCHPO | Protein hob1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hob1 PE=1 SV=1 | 75 | 306 | 2.0E-26 |
| sp|Q68FW8|BIN3_RAT | Bridging integrator 3 OS=Rattus norvegicus GN=Bin3 PE=2 SV=1 | 75 | 331 | 5.0E-22 |
| sp|Q7TQF7|AMPH_MOUSE | Amphiphysin OS=Mus musculus GN=Amph PE=1 SV=1 | 80 | 290 | 3.0E-21 |
| sp|P49418|AMPH_HUMAN | Amphiphysin OS=Homo sapiens GN=AMPH PE=1 SV=1 | 80 | 290 | 5.0E-21 |
| sp|O08838|AMPH_RAT | Amphiphysin OS=Rattus norvegicus GN=Amph PE=1 SV=1 | 80 | 290 | 5.0E-21 |
| sp|Q9JI08|BIN3_MOUSE | Bridging integrator 3 OS=Mus musculus GN=Bin3 PE=1 SV=1 | 75 | 331 | 6.0E-21 |
| sp|Q9NQY0|BIN3_HUMAN | Bridging integrator 3 OS=Homo sapiens GN=BIN3 PE=1 SV=1 | 75 | 331 | 5.0E-20 |
| sp|P50478|AMPH_CHICK | Amphiphysin OS=Gallus gallus GN=AMPH PE=2 SV=1 | 73 | 290 | 9.0E-20 |
| sp|Q5PPZ5|BIN3_XENLA | Bridging integrator 3 homolog OS=Xenopus laevis GN=bin3 PE=2 SV=1 | 75 | 331 | 1.0E-19 |
| sp|Q59LF3|RV167_CANAL | Regulator of cytoskeleton and endocytosis RVS167 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RVS167 PE=3 SV=1 | 75 | 306 | 1.0E-18 |
| sp|P39743|RV167_YEAST | Reduced viability upon starvation protein 167 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RVS167 PE=1 SV=1 | 75 | 310 | 3.0E-16 |
| sp|Q68FR2|BIN2_RAT | Bridging integrator 2 OS=Rattus norvegicus GN=Bin2 PE=1 SV=1 | 80 | 302 | 1.0E-15 |
| sp|Q9UBW5|BIN2_HUMAN | Bridging integrator 2 OS=Homo sapiens GN=BIN2 PE=1 SV=3 | 80 | 270 | 1.0E-13 |
| sp|O00499|BIN1_HUMAN | Myc box-dependent-interacting protein 1 OS=Homo sapiens GN=BIN1 PE=1 SV=1 | 72 | 303 | 6.0E-12 |
| sp|D3Z6Q9|BIN2_MOUSE | Bridging integrator 2 OS=Mus musculus GN=Bin2 PE=1 SV=1 | 80 | 302 | 7.0E-12 |
| sp|O08839|BIN1_RAT | Myc box-dependent-interacting protein 1 OS=Rattus norvegicus GN=Bin1 PE=1 SV=1 | 78 | 303 | 8.0E-12 |
| sp|O08539|BIN1_MOUSE | Myc box-dependent-interacting protein 1 OS=Mus musculus GN=Bin1 PE=1 SV=1 | 72 | 303 | 8.0E-12 |
| sp|Q5ZKL7|BIN2_CHICK | Bridging integrator 2 OS=Gallus gallus GN=BIN2 PE=2 SV=1 | 70 | 302 | 4.0E-10 |
| sp|A1IGU5|ARH37_HUMAN | Rho guanine nucleotide exchange factor 37 OS=Homo sapiens GN=ARHGEF37 PE=2 SV=2 | 67 | 301 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005737 | cytoplasm | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 26 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1239 MGCRSTRQRLGAWCVLCLSPHHVLCGAAPRRRRLTSWRRFGCVSLLPIVRVKSAAYREPPLPSPLGLAWKTTATM SWAGFKKNVGRATTQVMMKTGHVEKTNDRDYEVEERRFRTMEAASLRLQKEAKGYLDSLRAMTASQMRIAETIDA FYGDLGAKDGVSRSYKQAVEDLDAETIKALDGPYRTTVLEPISRFCAYFPDVNECIKKRSHKLLDYDALRAKVKK LAEKPDKDATKLPRTEKELEMAKSAYEQLNEQLSTELPQLIDLRVPYLDPTFEALVKIQLRFCAEAYSRMAQVQQ YLDADTREQYAEGHLDVRVEQVLQEIRELSISGTV |
| Coding | >Ophio5|1239 ATGGGCTGCCGGAGTACACGGCAACGTTTAGGTGCCTGGTGCGTCTTGTGCTTGTCCCCACATCACGTGCTATGC GGCGCAGCACCTCGGCGTCGGCGACTGACGTCGTGGCGCCGATTTGGCTGCGTCAGCCTTTTGCCCATCGTCAGA GTGAAATCCGCTGCCTATCGAGAGCCTCCTCTACCGTCTCCCCTTGGTCTTGCCTGGAAAACCACAGCCACCATG TCGTGGGCGGGGTTCAAGAAGAACGTCGGACGCGCGACGACGCAGGTTATGATGAAGACTGGGCACGTGGAGAAG ACAAACGATCGCGATTATGAAGTGGAAGAGAGACGGTTCCGAACGATGGAGGCGGCATCGCTACGGCTGCAAAAG GAAGCCAAAGGCTATCTCGACTCACTCAGAGCCATGACTGCGTCGCAAATGAGAATAGCAGAAACAATCGACGCC TTCTACGGGGACTTGGGCGCCAAGGACGGCGTCAGCAGAAGCTACAAGCAGGCAGTTGAGGATCTCGATGCCGAG ACAATCAAGGCCCTCGACGGCCCGTACCGGACGACCGTCCTCGAGCCCATTTCACGCTTTTGCGCATATTTCCCC GACGTCAACGAGTGCATAAAGAAGCGCTCGCACAAGTTACTCGACTACGACGCCTTACGAGCCAAGGTCAAGAAG CTGGCCGAAAAGCCCGACAAGGACGCCACGAAGCTGCCGCGCACCGAGAAGGAGTTGGAGATGGCCAAGAGCGCC TACGAGCAGCTTAACGAACAGCTCAGCACCGAACTGCCTCAACTGATCGACCTGCGCGTCCCGTACCTCGATCCC ACCTTTGAGGCGCTCGTCAAGATCCAGCTGCGGTTCTGCGCAGAAGCATACTCGCGCATGGCCCAGGTGCAGCAA TATCTTGATGCTGACACGAGGGAGCAGTATGCCGAAGGTCATCTGGACGTTCGTGTAGAGCAGGTTCTGCAGGAG ATTCGGGAGTTGAGCATAAGCGGCACGGTG |
| Transcript | >Ophio5|1239 ATGGGCTGCCGGAGTACACGGCAACGTTTAGGTGCCTGGTGCGTCTTGTGCTTGTCCCCACATCACGTGCTATGC GGCGCAGCACCTCGGCGTCGGCGACTGACGTCGTGGCGCCGATTTGGCTGCGTCAGCCTTTTGCCCATCGTCAGA GTGAAATCCGCTGCCTATCGAGAGCCTCCTCTACCGTCTCCCCTTGGTCTTGCCTGGAAAACCACAGCCACCATG TCGTGGGCGGGGTTCAAGAAGAACGTCGGACGCGCGACGACGCAGGTTATGATGAAGACTGGGCACGTGGAGAAG ACAAACGATCGCGATTATGAAGTGGAAGAGAGACGGTTCCGAACGATGGAGGCGGCATCGCTACGGCTGCAAAAG GAAGCCAAAGGCTATCTCGACTCACTCAGAGCCATGACTGCGTCGCAAATGAGAATAGCAGAAACAATCGACGCC TTCTACGGGGACTTGGGCGCCAAGGACGGCGTCAGCAGAAGCTACAAGCAGGCAGTTGAGGATCTCGATGCCGAG ACAATCAAGGCCCTCGACGGCCCGTACCGGACGACCGTCCTCGAGCCCATTTCACGCTTTTGCGCATATTTCCCC GACGTCAACGAGTGCATAAAGAAGCGCTCGCACAAGTTACTCGACTACGACGCCTTACGAGCCAAGGTCAAGAAG CTGGCCGAAAAGCCCGACAAGGACGCCACGAAGCTGCCGCGCACCGAGAAGGAGTTGGAGATGGCCAAGAGCGCC TACGAGCAGCTTAACGAACAGCTCAGCACCGAACTGCCTCAACTGATCGACCTGCGCGTCCCGTACCTCGATCCC ACCTTTGAGGCGCTCGTCAAGATCCAGCTGCGGTTCTGCGCAGAAGCATACTCGCGCATGGCCCAGGTGCAGCAA TATCTTGATGCTGACACGAGGGAGCAGTATGCCGAAGGTCATCTGGACGTTCGTGTAGAGCAGGTTCTGCAGGAG ATTCGGGAGTTGAGCATAAGCGGCACGGTGTGA |
| Gene | >Ophio5|1239 ATGGGCTGCCGGAGTACACGGCAACGTTTAGGTGCCTGGTGCGTCTTGTGGTGTGTCTGCCTCGTGCCTCGCCCC ACGAGCAGCATTACCTAATCCGTCTAAGCTTGTCCCCACATCACGTGCTATGCGGCGCAGCACCTCGGCGTCGGC GACTGACGTCGTGGCGCCGATTTGGCTGCGTCAGCCTTTTGCCCATCGTCAGAGTGAGTATTCAACAAGTCGAAT CGTCATCGATTGCCTCGAAACCATCACTCCTCGACTTGCCCGACTGTAGAATCCGCTGCCTATCGAGAGCCTCCT CTACCGTCTCCCCTTGGTCTTGCCTGGAAAACCACAGCCACCATGTCGTGGGCGGGTGCGTGTGATCGTGACGCC AACCTGGGATGAATGCCTGACTCGGAGCAGGGTTCAAGAAGAACGTCGGACGCGCGACGACGCAGGTTATGATGA AGACTGGTGCGTCGTCGTTGACCCTCGCGGGAGCCGCTCCCTCCTGATGGCTGACTCTCTGGTCAGGGCACGTGG AGAAGACAAACGATCGCGATTATGAAGTGGAAGAGAGGTTCGACAACAGCCCCGACGCGCGTCTTCTTGCCGCGC CATGCTGACTCTCCGCACCAGACGGTTCCGAACGATGGAGGCGGCATCGCTACGGCTGCAAAAGGAAGCCAAAGG CTATCTCGACTCACTCAGAGGTGCGCCGGAACCTTACCGCACGCCTCCCGCCCGCTGACTGTCCTTGCCTGCAGC CATGACTGCGTCGCAAATGAGAATAGCAGAAACAATCGACGCCTTCTACGGGGACTTGGGCGCCAAGGACGGCGT CAGCAGAAGCTACAAGCAGGCAGTTGAGGATCTCGATGCCGAGACAATCAAGGCCCTCGACGGCCCGTACCGGAC GACCGTCCTCGAGCCCATTTCACGCTTTTGCGCATATTTCCCCGACGTCAACGAGTGCATAAAGAAGCGCTCGCA CAAGTTACTCGACTACGACGCCTTACGAGCCAAGGTCAAGAAGCTGGCCGAAAAGCCCGACAAGGACGCCACGAA GCTGCCGCGCACCGAGAAGGAGTTGGAGATGGCCAAGAGCGCCTACGAGCAGCTTAACGAACAGCTCAGCACCGA ACTGCCTCAACTGATCGACCTGCGCGTCCCGTACCTCGATCCCACCTTTGAGGCGCTCGTCAAGATCCAGCTGCG GTTCTGCGCAGAAGCATACTCGCGCATGGCCCAGGTGCAGCAATATCTTGATGCTGACACGAGGGAGCAGTATGC CGAAGGTCATCTGGACGTTCGTGTAGAGCAGGTTCTGCAGGAGATTCGGGAGTTGAGCATAAGCGGCACGGTGTG A |