Protein ID | Ophio5|122 |
Gene name | |
Location | scaffold_1000:2556..4462 |
Strand | - |
Gene length (bp) | 1906 |
Transcript length (bp) | 1782 |
Coding sequence length (bp) | 1779 |
Protein length (aa) | 593 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14604 | SH3_9 | Variant SH3 domain | 2.1E-12 | 427 | 473 |
PF00018 | SH3_1 | SH3 domain | 1.8E-07 | 424 | 469 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 54 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 228 | 250 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|122 MAHKHHHRSLHDRRDVYSDLSRFVDMEFINNDRSKPPPPPPPPPSPPGNDESDGQRAAKDADMRTVVETIYKTLD PTFSGPIAGYVTLSEDTHPPPSPAPGPASSDRKLARIESKSLDTTAPSLPTSESPSVAQITSSFFESAAVSSPTT EVAASASSTTSADESSSSSFLSSSSSSSSFSSISSSTSSSISSPTSSARAAADLSRGGKGGHDSGNGGGGGSGPG VKVGIALGVMGGIVALGLMAFFLLKRRRKQAEKGYKLQDEKPRKGFGAISNPFESSSARDNPGAPRISLRPVTQF LPNWNGLEKRTSKGPMTAKAAAEPNQGDPWDRTMVNPFDNVPSTIAEEQSVRSFSTSTGSINGSNPFAGGRTVGP PSTRSPPPGSMALSTSPTGTDYSLSSVSSEAAAAGAAAGLPPVSAVHRVQLDFKPTLDDEMELRIGELIRLLHEY DDGWCLVSRLDRSQQGVVPRTCLSTRPVKPRQPQGAPRPGPPVNPTGPGRGPNQVGGPGPGPGPTRPGPPGGGFG RPPSPPRPPTTQSFRSGPVGGNNGHQGQQPMNRPGWPGSMKPRYRVSPPGPPPQYRPMGPISRKPMPG |
Coding | >Ophio5|122 ATGGCGCACAAGCATCATCATCGGTCTTTGCACGATCGACGCGATGTCTACAGCGATCTGTCTCGCTTTGTCGAC ATGGAGTTTATCAACAATGATAGATCCAAGCCGCCACCACCACCACCGCCGCCCCCGTCCCCGCCTGGCAACGAC GAGAGCGATGGACAGCGCGCTGCTAAAGATGCTGATATGAGGACCGTCGTGGAAACCATCTACAAAACCCTGGAC CCTACCTTCTCGGGACCCATCGCCGGCTACGTGACGCTAAGCGAAGATACCCATCCGCCTCCCTCGCCGGCTCCT GGCCCAGCGTCATCAGATCGCAAGCTCGCTCGTATTGAGAGCAAATCCCTCGACACCACAGCTCCGTCCCTTCCC ACATCTGAGTCTCCCAGCGTTGCCCAAATAACCAGCAGCTTCTTCGAGTCCGCCGCCGTCTCCTCACCAACGACG GAAGTAGCAGCCTCGGCATCGTCGACGACATCAGCAGACGAGTCGTCGTCGTCTTCTTTTCTGTCGTCTTCCTCT TCATCATCTTCCTTCTCGTCCATCTCCTCGTCCACCTCCTCTTCCATCTCGTCGCCCACCTCCAGCGCCCGTGCA GCGGCCGACCTGTCCAGAGGCGGCAAGGGCGGTCACGACTCCGGGAATGGCGGCGGTGGAGGGTCGGGGCCCGGC GTCAAGGTCGGCATCGCCTTGGGTGTCATGGGCGGCATCGTTGCACTGGGCCTGATGGCCTTTTTCCTGCTCAAG CGTCGCCGCAAGCAGGCTGAAAAGGGCTACAAGCTCCAAGACGAGAAGCCTCGCAAAGGTTTCGGTGCTATATCG AATCCCTTTGAGTCGTCGTCGGCTCGCGACAATCCCGGGGCGCCTCGCATCAGCCTCCGTCCCGTCACCCAATTC CTGCCCAACTGGAACGGGCTGGAAAAGCGGACGAGTAAGGGTCCCATGACGGCAAAGGCAGCGGCAGAGCCTAAT CAGGGGGATCCATGGGACCGCACCATGGTCAATCCCTTCGACAACGTCCCCTCCACCATCGCCGAGGAGCAGAGC GTCCGCAGCTTCAGCACCTCGACGGGAAGCATCAACGGGAGCAATCCCTTTGCCGGAGGGCGAACCGTCGGCCCC CCGAGCACAAGGTCCCCGCCGCCCGGCAGCATGGCCTTGTCGACGAGTCCGACGGGGACCGACTACAGCCTCTCG TCCGTTTCGTCGGAAGCGGCGGCCGCCGGTGCCGCCGCGGGCTTGCCCCCCGTCAGCGCCGTTCATCGCGTTCAG CTCGACTTCAAGCCGACGCTAGACGATGAGATGGAACTGAGAATCGGCGAGTTGATCCGCCTGCTTCACGAGTAC GACGACGGATGGTGTCTGGTCAGCCGCCTCGACCGGTCACAGCAAGGCGTCGTGCCGCGGACGTGTCTCTCGACG CGTCCCGTCAAGCCGCGTCAGCCGCAGGGTGCGCCTCGTCCCGGTCCTCCCGTGAACCCGACGGGTCCTGGACGG GGGCCCAACCAGGTCGGCGGTCCGGGTCCGGGTCCGGGTCCGACCAGACCGGGCCCTCCTGGTGGCGGGTTTGGA CGTCCGCCGTCTCCTCCACGGCCTCCGACGACGCAGAGCTTCCGGTCCGGTCCGGTGGGTGGTAACAACGGCCAT CAGGGGCAGCAGCCGATGAACCGACCAGGGTGGCCCGGATCGATGAAGCCCCGGTATCGCGTGTCGCCGCCCGGA CCCCCCCCTCAATATCGTCCGATGGGTCCCATAAGCAGAAAGCCGATGCCGGGC |
Transcript | >Ophio5|122 ATGGCGCACAAGCATCATCATCGGTCTTTGCACGATCGACGCGATGTCTACAGCGATCTGTCTCGCTTTGTCGAC ATGGAGTTTATCAACAATGATAGATCCAAGCCGCCACCACCACCACCGCCGCCCCCGTCCCCGCCTGGCAACGAC GAGAGCGATGGACAGCGCGCTGCTAAAGATGCTGATATGAGGACCGTCGTGGAAACCATCTACAAAACCCTGGAC CCTACCTTCTCGGGACCCATCGCCGGCTACGTGACGCTAAGCGAAGATACCCATCCGCCTCCCTCGCCGGCTCCT GGCCCAGCGTCATCAGATCGCAAGCTCGCTCGTATTGAGAGCAAATCCCTCGACACCACAGCTCCGTCCCTTCCC ACATCTGAGTCTCCCAGCGTTGCCCAAATAACCAGCAGCTTCTTCGAGTCCGCCGCCGTCTCCTCACCAACGACG GAAGTAGCAGCCTCGGCATCGTCGACGACATCAGCAGACGAGTCGTCGTCGTCTTCTTTTCTGTCGTCTTCCTCT TCATCATCTTCCTTCTCGTCCATCTCCTCGTCCACCTCCTCTTCCATCTCGTCGCCCACCTCCAGCGCCCGTGCA GCGGCCGACCTGTCCAGAGGCGGCAAGGGCGGTCACGACTCCGGGAATGGCGGCGGTGGAGGGTCGGGGCCCGGC GTCAAGGTCGGCATCGCCTTGGGTGTCATGGGCGGCATCGTTGCACTGGGCCTGATGGCCTTTTTCCTGCTCAAG CGTCGCCGCAAGCAGGCTGAAAAGGGCTACAAGCTCCAAGACGAGAAGCCTCGCAAAGGTTTCGGTGCTATATCG AATCCCTTTGAGTCGTCGTCGGCTCGCGACAATCCCGGGGCGCCTCGCATCAGCCTCCGTCCCGTCACCCAATTC CTGCCCAACTGGAACGGGCTGGAAAAGCGGACGAGTAAGGGTCCCATGACGGCAAAGGCAGCGGCAGAGCCTAAT CAGGGGGATCCATGGGACCGCACCATGGTCAATCCCTTCGACAACGTCCCCTCCACCATCGCCGAGGAGCAGAGC GTCCGCAGCTTCAGCACCTCGACGGGAAGCATCAACGGGAGCAATCCCTTTGCCGGAGGGCGAACCGTCGGCCCC CCGAGCACAAGGTCCCCGCCGCCCGGCAGCATGGCCTTGTCGACGAGTCCGACGGGGACCGACTACAGCCTCTCG TCCGTTTCGTCGGAAGCGGCGGCCGCCGGTGCCGCCGCGGGCTTGCCCCCCGTCAGCGCCGTTCATCGCGTTCAG CTCGACTTCAAGCCGACGCTAGACGATGAGATGGAACTGAGAATCGGCGAGTTGATCCGCCTGCTTCACGAGTAC GACGACGGATGGTGTCTGGTCAGCCGCCTCGACCGGTCACAGCAAGGCGTCGTGCCGCGGACGTGTCTCTCGACG CGTCCCGTCAAGCCGCGTCAGCCGCAGGGTGCGCCTCGTCCCGGTCCTCCCGTGAACCCGACGGGTCCTGGACGG GGGCCCAACCAGGTCGGCGGTCCGGGTCCGGGTCCGGGTCCGACCAGACCGGGCCCTCCTGGTGGCGGGTTTGGA CGTCCGCCGTCTCCTCCACGGCCTCCGACGACGCAGAGCTTCCGGTCCGGTCCGGTGGGTGGTAACAACGGCCAT CAGGGGCAGCAGCCGATGAACCGACCAGGGTGGCCCGGATCGATGAAGCCCCGGTATCGCGTGTCGCCGCCCGGA CCCCCCCCTCAATATCGTCCGATGGGTCCCATAAGCAGAAAGCCGATGCCGGGCTGA |
Gene | >Ophio5|122 ATGGCGCACAAGCATCATCATCGGTCTTTGCACGATCGACGCGATGTCTACAGCGATCTGTCTCGCTTTGTCGAC ATGGAGTTTATCAACAATGATAGATCCAAGCCGCCACCACCACCACCGCCGCCCCCGTCCCCGCCTGGCAACGAC GAGAGCGATGGACAGCGCGCTGCTAAAGATGGTAGGCTTTGCTCGCCCCTTTTTTTTTTCTTTTTGCTTGTGTGG TTTCGCCGCTGACGCGTCTGCAAGCTGATATGAGGACCGTCGTGGAAACCATCTACAAAACCCTGGACCCTACCT TCTCGGGACCCATCGCCGGCTACGTGACGCTAAGCGAAGATACCCATCCGCCTCCCTCGCCGGCTCCTGGCCCAG CGTCATCAGATCGCAAGCTCGCTCGTATTGAGAGCAAATCCCTCGACACCACAGCTCCGTCCCTTCCCACATCTG AGTCTCCCAGCGTTGCCCAAATAACCAGCAGCTTCTTCGAGTCCGCCGCCGTCTCCTCACCAACGACGGAAGTAG CAGCCTCGGCATCGTCGACGACATCAGCAGACGAGTCGTCGTCGTCTTCTTTTCTGTCGTCTTCCTCTTCATCAT CTTCCTTCTCGTCCATCTCCTCGTCCACCTCCTCTTCCATCTCGTCGCCCACCTCCAGCGCCCGTGCAGCGGCCG ACCTGTCCAGAGGCGGCAAGGGCGGTCACGACTCCGGGAATGGCGGCGGTGGAGGGTCGGGGCCCGGCGTCAAGG TCGGCATCGCCTTGGGTGTCATGGGCGGCATCGTTGCACTGGGCCTGATGGCCTTTTTCCTGCTCAAGCGTCGCC GCAAGCAGGCTGAAAAGGGCTACAAGCTCCAAGACGAGAAGCCTCGCAAAGGTTTCGGTGCTATATCGAATCCCT TTGAGTCGTCGTCGGCTCGCGACAATCCCGGGGCGCCTCGCATCAGCCTCCGTCCCGTCACCCAATTCCTGCCCA ACTGGAACGGGCTGGAAAAGCGGACGAGTAAGGGTCCCATGACGGCAAAGGCAGCGGCAGAGCCTAATCAGGGGG ATCCATGGGACCGCACCATGGTCAATCCCTTCGACAACGTCCCCTCCACCATCGCCGAGGAGCAGAGCGTCCGCA GCTTCAGCACCTCGACGGGAAGCATCAACGGGAGCAATCCCTTTGCCGGAGGGCGAACCGTCGGCCCCCCGAGCA CAAGGTCCCCGCCGCCCGGCAGCATGGCCTTGTCGACGAGTCCGACGGGGACCGACTACAGCCTCTCGTCCGTTT CGTCGGAAGCGGCGGCCGCCGGTGCCGCCGCGGGCTTGCCCCCCGTCAGCGCCGTTCATCGCGTTCAGCTCGACT TCAAGCCGACGCTAGACGATGAGATGGAACTGAGAATCGGCGAGTTGATCCGCCTGCTTCACGAGTACGACGACG GATGGGTAAGTGATTTCATTTTCCCCACCCGCTCGGCCCTCCCTGCTAACGTGGCCGGCAGTGTCTGGTCAGCCG CCTCGACCGGTCACAGCAAGGCGTCGTGCCGCGGACGTGTCTCTCGACGCGTCCCGTCAAGCCGCGTCAGCCGCA GGGTGCGCCTCGTCCCGGTCCTCCCGTGAACCCGACGGGTCCTGGACGGGGGCCCAACCAGGTCGGCGGTCCGGG TCCGGGTCCGGGTCCGACCAGACCGGGCCCTCCTGGTGGCGGGTTTGGACGTCCGCCGTCTCCTCCACGGCCTCC GACGACGCAGAGCTTCCGGTCCGGTCCGGTGGGTGGTAACAACGGCCATCAGGGGCAGCAGCCGATGAACCGACC AGGGTGGCCCGGATCGATGAAGCCCCGGTATCGCGTGTCGCCGCCCGGACCCCCCCCTCAATATCGTCCGATGGG TCCCATAAGCAGAAAGCCGATGCCGGGCTGA |