© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophio5|1190 |
| Gene name | |
| Location | scaffold_1382:328..1708 |
| Strand | - |
| Gene length (bp) | 1380 |
| Transcript length (bp) | 1380 |
| Coding sequence length (bp) | 1377 |
| Protein length (aa) | 459 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00295 | Glyco_hydro_28 | Glycosyl hydrolases family 28 | 8.2E-36 | 159 | 448 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A2QG68|RGXB_ASPNC | Alpha-L-rhamnosidase rgxB OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=rgxB PE=2 SV=2 | 50 | 454 | 5.0E-91 |
| sp|A2QBB4|RGXA_ASPNC | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=rgxA PE=2 SV=2 | 26 | 453 | 5.0E-66 |
| sp|Q2EQQ2|RGXA_ASPNG | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger GN=rgxA PE=2 SV=1 | 26 | 453 | 4.0E-65 |
| sp|Q2UP32|RGXA_ASPOR | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rgxA PE=3 SV=1 | 68 | 453 | 4.0E-54 |
| sp|B8NJB0|RGXA_ASPFN | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=rgxA PE=3 SV=2 | 68 | 453 | 4.0E-54 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A2QG68|RGXB_ASPNC | Alpha-L-rhamnosidase rgxB OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=rgxB PE=2 SV=2 | 50 | 454 | 5.0E-91 |
| sp|A2QBB4|RGXA_ASPNC | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=rgxA PE=2 SV=2 | 26 | 453 | 5.0E-66 |
| sp|Q2EQQ2|RGXA_ASPNG | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger GN=rgxA PE=2 SV=1 | 26 | 453 | 4.0E-65 |
| sp|Q2UP32|RGXA_ASPOR | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rgxA PE=3 SV=1 | 68 | 453 | 4.0E-54 |
| sp|B8NJB0|RGXA_ASPFN | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=rgxA PE=3 SV=2 | 68 | 453 | 4.0E-54 |
| sp|Q4WCZ8|PGLRX_ASPFU | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgaX PE=3 SV=2 | 64 | 444 | 4.0E-45 |
| sp|B0YDE8|PGLRX_ASPFC | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=pgaX PE=3 SV=2 | 64 | 444 | 4.0E-45 |
| sp|A1DLC1|PGLRX_NEOFI | Probable exopolygalacturonase X OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaX PE=3 SV=2 | 64 | 444 | 4.0E-45 |
| sp|B8NG16|PGLRX_ASPFN | Probable exopolygalacturonase X OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=pgaX PE=3 SV=1 | 60 | 444 | 1.0E-44 |
| sp|Q5ARN5|PGLX2_EMENI | Exopolygalacturonase X-2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgaX-2 PE=2 SV=1 | 56 | 441 | 1.0E-43 |
| sp|Q00293|PGLRX_ASPTU | Exopolygalacturonase X OS=Aspergillus tubingensis GN=pgaX PE=1 SV=1 | 41 | 444 | 3.0E-42 |
| sp|Q0CGP0|PGLRX_ASPTN | Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pgaX PE=3 SV=1 | 60 | 444 | 5.0E-42 |
| sp|Q5ASG9|PGLX1_EMENI | Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgaX-1 PE=1 SV=1 | 64 | 445 | 1.0E-41 |
| sp|Q27UB3|PGLRX_ASPNG | Exopolygalacturonase X OS=Aspergillus niger GN=pgaX PE=3 SV=1 | 41 | 444 | 8.0E-41 |
| sp|A2R060|PGLRX_ASPNC | Probable exopolygalacturonase X OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pgaX PE=3 SV=1 | 41 | 444 | 8.0E-41 |
| sp|Q00359|PGLRX_COCCA | Exopolygalacturonase OS=Cochliobolus carbonum GN=PGX1 PE=3 SV=1 | 11 | 446 | 7.0E-39 |
| sp|A2RAY7|RGXC_ASPNC | Putative galacturan 1,4-alpha-galacturonidase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=rgxC PE=2 SV=1 | 62 | 426 | 7.0E-37 |
| sp|Q27UB2|PGXA_ASPNG | Exopolygalacturonase A OS=Aspergillus niger GN=pgxA PE=3 SV=1 | 20 | 444 | 5.0E-35 |
| sp|A2QW66|PGXA_ASPNC | Probable exopolygalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pgxA PE=3 SV=1 | 20 | 444 | 5.0E-35 |
| sp|B8NX60|PGXB_ASPFN | Probable exopolygalacturonase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=pgxB PE=3 SV=1 | 96 | 452 | 9.0E-35 |
| sp|Q2TW03|PGXB_ASPOR | Probable exopolygalacturonase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=pgxB PE=3 SV=2 | 96 | 452 | 9.0E-35 |
| sp|Q27UB1|PGXB_ASPNG | Exopolygalacturonase B OS=Aspergillus niger GN=pgxB PE=3 SV=1 | 96 | 452 | 7.0E-33 |
| sp|A2QHG0|PGXB_ASPNC | Probable exopolygalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pgxB PE=3 SV=1 | 96 | 452 | 7.0E-33 |
| sp|Q873X6|PGXB_EMENI | Probable exopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgxB PE=2 SV=1 | 96 | 452 | 2.0E-31 |
| sp|Q0C7H7|PGXB_ASPTN | Probable exopolygalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pgxB PE=3 SV=1 | 96 | 452 | 1.0E-29 |
| sp|A1D415|RGXC_NEOFI | Putative galacturan 1,4-alpha-galacturonidase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rgxC PE=3 SV=1 | 61 | 426 | 6.0E-29 |
| sp|Q4WBK6|PGXB_ASPFU | Probable exopolygalacturonase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgxB PE=3 SV=2 | 101 | 452 | 9.0E-29 |
| sp|B0YAA4|PGXB_ASPFC | Probable exopolygalacturonase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=pgxB PE=3 SV=2 | 101 | 452 | 1.0E-28 |
| sp|A1DAX2|PGXB_NEOFI | Probable exopolygalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgxB PE=3 SV=1 | 17 | 452 | 2.0E-28 |
| sp|I1BYN6|RPG16_RHIO9 | Exopolygalacturonase rpg16 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=rpg16 PE=1 SV=1 | 69 | 427 | 6.0E-23 |
| sp|Q4WX94|PGXC_ASPFU | Probable exopolygalacturonase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgxC PE=3 SV=1 | 59 | 399 | 2.0E-21 |
| sp|B0XYC4|PGXC_ASPFC | Probable exopolygalacturonase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=pgxC PE=3 SV=1 | 59 | 399 | 3.0E-21 |
| sp|Q7M1E7|PGLR2_CHAOB | Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1 | 124 | 434 | 6.0E-21 |
| sp|B0Y9F8|XGHA_ASPFC | Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=xghA PE=3 SV=2 | 63 | 455 | 9.0E-21 |
| sp|Q4WBT4|XGHA_ASPFU | Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=xghA PE=3 SV=2 | 63 | 455 | 1.0E-20 |
| sp|A1DBT5|XGHA_NEOFI | Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=xghA PE=3 SV=1 | 51 | 455 | 2.0E-20 |
| sp|P49062|PGLR1_ARATH | Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1 | 164 | 438 | 2.0E-20 |
| sp|A1D7I1|PGXC_NEOFI | Probable exopolygalacturonase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgxC PE=3 SV=1 | 59 | 399 | 2.0E-20 |
| sp|I1BYM7|RPG15_RHIO9 | Exopolygalacturonase rpg15 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=rpg15 PE=1 SV=1 | 69 | 422 | 3.0E-20 |
| sp|Q39786|PGLR_GOSHI | Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1 | 141 | 444 | 5.0E-20 |
| sp|P43212|PGLR2_CRYJA | Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1 | 141 | 434 | 9.0E-20 |
| sp|Q9FY19|PGLR2_JUNAS | Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1 | 141 | 447 | 2.0E-19 |
| sp|Q39766|PGLR_GOSBA | Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1 | 141 | 444 | 5.0E-19 |
| sp|Q02096|PGLR_PERAE | Polygalacturonase OS=Persea americana PE=2 SV=1 | 73 | 444 | 6.0E-17 |
| sp|Q2UQ40|PGXC_ASPOR | Probable exopolygalacturonase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=pgxC PE=3 SV=1 | 62 | 399 | 9.0E-17 |
| sp|B8MZZ6|PGXC_ASPFN | Probable exopolygalacturonase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=pgxC PE=3 SV=1 | 62 | 399 | 9.0E-17 |
| sp|Q27UB0|PGXC_ASPNG | Exopolygalacturonase C OS=Aspergillus niger GN=pgxC PE=2 SV=1 | 56 | 399 | 2.0E-16 |
| sp|A2QEW2|PGXC_ASPNC | Probable exopolygalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pgxC PE=3 SV=2 | 56 | 399 | 2.0E-16 |
| sp|Q2UBD8|XGHA_ASPOR | Probable endo-xylogalacturonan hydrolase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xghA PE=3 SV=1 | 50 | 455 | 3.0E-16 |
| sp|B8NPS8|XGHA_ASPFN | Probable endo-xylogalacturonan hydrolase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=xghA PE=3 SV=1 | 50 | 455 | 3.0E-16 |
| sp|Q9UUZ2|XGHA_ASPTU | Endo-xylogalacturonan hydrolase A OS=Aspergillus tubingensis GN=xghA PE=1 SV=1 | 50 | 455 | 4.0E-16 |
| sp|P49063|PGLR2_ARATH | Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=2 SV=2 | 158 | 445 | 9.0E-16 |
| sp|O23147|ADPG1_ARATH | Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1 | 156 | 429 | 1.0E-15 |
| sp|P48978|PGLR_MALDO | Polygalacturonase OS=Malus domestica PE=2 SV=1 | 73 | 415 | 1.0E-15 |
| sp|Q949Z1|PGLR4_ARATH | Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1 | 78 | 446 | 1.0E-15 |
| sp|Q6H9K0|PGLR2_PLAAC | Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1 | 141 | 444 | 2.0E-15 |
| sp|Q8RY29|ADPG2_ARATH | Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2 | 78 | 434 | 2.0E-15 |
| sp|A2QK83|XGHA_ASPNC | Probable endo-xylogalacturonan hydrolase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=xghA PE=3 SV=1 | 50 | 455 | 5.0E-15 |
| sp|Q5B7U1|XGHA_EMENI | Probable endo-xylogalacturonan hydrolase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=xghA PE=3 SV=1 | 63 | 433 | 5.0E-14 |
| sp|O22818|PGLR6_ARATH | Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1 | 137 | 446 | 1.0E-13 |
| sp|Q0CXI3|PGXC_ASPTN | Probable exopolygalacturonase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pgxC PE=3 SV=1 | 63 | 399 | 2.0E-13 |
| sp|Q94AJ5|PGLR5_ARATH | Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=1 SV=1 | 164 | 447 | 2.0E-13 |
| sp|P24548|PGLR_OENOR | Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1 | 163 | 448 | 1.0E-12 |
| sp|Q40312|PGLR_MEDSA | Polygalacturonase OS=Medicago sativa PE=2 SV=1 | 164 | 445 | 1.0E-11 |
| sp|P35337|PGLR_BRANA | Polygalacturonase OS=Brassica napus PE=2 SV=1 | 164 | 444 | 2.0E-11 |
| sp|Q9SFB7|QRT2_ARATH | Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2 | 73 | 452 | 2.0E-11 |
| sp|P35336|PGLR_ACTDE | Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1 | 164 | 445 | 3.0E-11 |
| sp|I1BYN5|RPG14_RHIO9 | Exopolygalacturonase rpg14 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=rpg14 PE=1 SV=1 | 75 | 446 | 3.0E-11 |
| sp|Q5AYH4|PGLRD_EMENI | Probable endopolygalacturonase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgaD PE=3 SV=1 | 152 | 399 | 5.0E-11 |
| sp|Q2UHL4|PGLR1_ASPOR | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=pgaI PE=1 SV=1 | 153 | 444 | 7.0E-11 |
| sp|B8N8M2|PGLR1_ASPFN | Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=pgaI PE=3 SV=1 | 153 | 444 | 7.0E-11 |
| sp|A1DBR6|PGLRD_NEOFI | Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaD PE=3 SV=1 | 152 | 401 | 1.0E-10 |
| sp|Q05967|PGLR_TOBAC | Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1 | 164 | 444 | 1.0E-10 |
| sp|Q07181|PGLR_GIBFU | Polygalacturonase OS=Gibberella fujikuroi GN=PGA PE=1 SV=1 | 152 | 405 | 2.0E-10 |
| sp|Q12554|PGLRC_ASPNG | Probable endopolygalacturonase C OS=Aspergillus niger GN=pgaC PE=3 SV=1 | 107 | 331 | 3.0E-10 |
| sp|A2QL39|PGLRC_ASPNC | Probable endopolygalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pgaC PE=3 SV=1 | 107 | 331 | 3.0E-10 |
| sp|O59925|PGLR_PENEN | Polygalacturonase OS=Penicillium expansum GN=PEPG1 PE=3 SV=1 | 168 | 415 | 5.0E-10 |
| sp|O93883|PGLR_PENGR | Polygalacturonase OS=Penicillium griseoroseum GN=PGG1 PE=3 SV=1 | 155 | 444 | 1.0E-09 |
| sp|B8NGP8|RHGC_ASPFN | Probable rhamnogalacturonase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=rhgC PE=3 SV=2 | 15 | 447 | 1.0E-09 |
| sp|P26215|PGLR_COCCA | Polygalacturonase OS=Cochliobolus carbonum GN=PGN1 PE=3 SV=1 | 167 | 406 | 1.0E-09 |
| sp|Q70HJ3|PGLRC_ASPAC | Probable endopolygalacturonase C OS=Aspergillus aculeatus GN=pgaC PE=2 SV=1 | 155 | 418 | 2.0E-09 |
| sp|Q2UFD2|RHGC_ASPOR | Probable rhamnogalacturonase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rhgC PE=3 SV=1 | 15 | 447 | 3.0E-09 |
| sp|Q9LW07|PGLR3_ARATH | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1 | 164 | 454 | 4.0E-09 |
| sp|Q8NK99|PGLRA_ASPKW | Probable endopolygalacturonase A OS=Aspergillus kawachii (strain NBRC 4308) GN=pgaA PE=3 SV=1 | 168 | 444 | 6.0E-09 |
| sp|A2QLQ5|RHGC_ASPNC | Probable rhamnogalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=rhgC PE=3 SV=1 | 256 | 447 | 1.0E-08 |
| sp|Q9Y833|PGLR2_PENOL | Polygalacturonase 2 OS=Penicillium olsonii GN=PG2 PE=3 SV=1 | 155 | 444 | 2.0E-08 |
| sp|P35339|PGLR3_MAIZE | Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1 | 164 | 446 | 3.0E-08 |
| sp|P26216|PGLR1_MAIZE | Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1 | 164 | 447 | 3.0E-08 |
| sp|Q9P4W2|PGLRD_ASPNG | Endopolygalacturonase D OS=Aspergillus niger GN=pgaD PE=3 SV=1 | 152 | 401 | 3.0E-08 |
| sp|A2QTU0|PGLRD_ASPNC | Probable endopolygalacturonase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pgaD PE=3 SV=1 | 152 | 401 | 3.0E-08 |
| sp|Q9P358|PGLRA_ASPAW | Endopolygalacturonase A OS=Aspergillus awamori GN=pgaA PE=1 SV=1 | 168 | 444 | 7.0E-08 |
| sp|Q00446|PGLR1_COLLN | Endopolygalacturonase 1 OS=Colletotrichum lindemuthianum GN=PG1 PE=3 SV=1 | 153 | 331 | 9.0E-08 |
| sp|Q5ARE6|RHGA_EMENI | Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rhgA PE=2 SV=2 | 78 | 456 | 1.0E-07 |
| sp|P48979|PGLR_PRUPE | Polygalacturonase OS=Prunus persica PE=2 SV=1 | 151 | 398 | 1.0E-07 |
| sp|Q5B508|PGLRB_EMENI | Endopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgaB PE=1 SV=2 | 155 | 444 | 1.0E-07 |
| sp|O74213|PGLR1_ASPAC | Endopolygalacturonase I OS=Aspergillus aculeatus GN=pgaI PE=1 SV=1 | 167 | 444 | 2.0E-07 |
| sp|A2QBB6|PGLRE_ASPNC | Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pgaE PE=3 SV=1 | 168 | 448 | 3.0E-07 |
| sp|P47180|PGLR_YEAST | Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PGU1 PE=1 SV=1 | 167 | 331 | 3.0E-07 |
| sp|P35338|PGLR2_MAIZE | Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1 | 164 | 447 | 4.0E-07 |
| sp|O42809|PGLRE_ASPNG | Endopolygalacturonase E OS=Aspergillus niger GN=pgaE PE=1 SV=1 | 168 | 448 | 5.0E-07 |
| sp|A1CVV8|PGLRA_NEOFI | Probable endopolygalacturonase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaA PE=3 SV=1 | 153 | 444 | 5.0E-07 |
| sp|I1BPS7|RPG13_RHIO9 | Exopolygalacturonase rpg13 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=rpg13 PE=1 SV=1 | 76 | 329 | 5.0E-07 |
| sp|A7PZL3|PGLR_VITVI | Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1 | 166 | 446 | 6.0E-07 |
| sp|Q8NK98|PGLR2_ASPKW | Probable endopolygalacturonase II OS=Aspergillus kawachii (strain NBRC 4308) GN=pgaII PE=3 SV=2 | 168 | 443 | 1.0E-06 |
| sp|Q1HAY5|PGLRB_ASPKA | Probable endopolygalacturonase B OS=Aspergillus kawachii GN=pgaB PE=3 SV=1 | 168 | 412 | 1.0E-06 |
| sp|Q4WQT2|PGLRA_ASPFU | Probable endopolygalacturonase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgaA PE=3 SV=1 | 153 | 444 | 2.0E-06 |
| sp|B0Y4Z4|PGLRA_ASPFC | Probable endopolygalacturonase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=pgaA PE=3 SV=1 | 153 | 444 | 2.0E-06 |
| sp|Q5ATQ3|PGLR_EMENI | Endopolygalacturonase AN8327 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN8327 PE=1 SV=1 | 155 | 398 | 2.0E-06 |
| sp|B8NK45|RHGA_ASPFN | Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=rhgA PE=3 SV=1 | 78 | 456 | 2.0E-06 |
| sp|Q9P4W3|PGLRB_ASPNG | Endopolygalacturonase B OS=Aspergillus niger GN=pgaB PE=1 SV=1 | 168 | 412 | 2.0E-06 |
| sp|A2QCV8|PGLRB_ASPNC | Probable endopolygalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pgaB PE=3 SV=1 | 168 | 412 | 2.0E-06 |
| sp|Q2U293|RHGA_ASPOR | Probable rhamnogalacturonase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rhgA PE=3 SV=1 | 78 | 456 | 5.0E-06 |
| sp|P26213|PGLR1_ASPNG | Endopolygalacturonase I OS=Aspergillus niger GN=pgaI PE=1 SV=1 | 153 | 444 | 5.0E-06 |
| sp|A2QAH3|PGLR1_ASPNC | Probable endopolygalacturonase I OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pgaI PE=3 SV=1 | 153 | 444 | 5.0E-06 |
| sp|P05117|PGLR_SOLLC | Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1 | 173 | 447 | 6.0E-06 |
| sp|P87160|RHGA_ASPNG | Rhamnogalacturonase A OS=Aspergillus niger GN=rhgA PE=1 SV=1 | 78 | 450 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0004650 | polygalacturonase activity | Yes |
| GO:0016787 | hydrolase activity | No |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0008152 | metabolic process | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 28 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 15.09 | 6.46 | 23.73 |
| CcL | In ants, during behavior modification | 0.04 | 0.00 | 0.26 |
| CcD | In ants, recently dead | 0.28 | 0.00 | 0.73 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.274982 | no |
| SC16a | CcD | 0.005162 | yes |
| CcL | CcD | 1.000000 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1190 MHHQHSPSLNLRAVMALGFLLLQTALALPSATHRGGVGPASKRATAGEEAPSMTQIQQQARDERRALCAIWPRSD GGDDGPAISAALTGRCRQRGLVYLPGTVYNIKTPMTTMGLSDVRIVQLGRLLWSPDIQYWLSVSMPVGFQNQSTV WVFGGDGINWDGYGTGTLDGNGQVWYDWAQGRGNLPRRPMNINLRQLTRSRLRRLRFVQSQMWTMAITYSHDVDL EDMYVKSTSNSRWNTLNTDGCDTINSDKINFRRWQVSNGDDAIALKGNSTNILIEDSVFSHGQGIAVGSMGQYLG RADTISGLRLRNIRLIDTAHVLYVKTWSGQSRGFPPNGGGGGTGVAQDIVVENVRFQGMRQQPFFSWQCENYSGH AGEDCNSSLVKIRNMHFRDVSGTVVDAVTDIGSLQCSSAAGGCNDISADHVSAKTLGGRELTSWHCENVHGNVGF ACNGGDKKQ |
| Coding | >Ophio5|1190 ATGCATCACCAACACTCACCTTCTCTCAACCTCCGGGCGGTCATGGCCCTCGGATTCTTGCTGCTGCAAACAGCG CTGGCCCTTCCATCGGCCACGCATCGCGGCGGCGTAGGTCCGGCAAGCAAGCGGGCGACAGCGGGCGAAGAGGCG CCGAGCATGACGCAGATTCAGCAGCAGGCCCGAGACGAGCGCCGAGCGCTATGTGCCATCTGGCCGAGGAGCGAC GGCGGCGACGACGGGCCGGCCATTTCGGCCGCCCTCACGGGACGCTGTCGACAGCGTGGTCTGGTCTACCTCCCC GGAACCGTGTATAATATCAAGACGCCGATGACGACCATGGGCCTCAGCGATGTGCGAATCGTCCAGCTGGGGAGG CTGCTCTGGAGTCCGGATATCCAATACTGGCTGTCGGTCTCGATGCCGGTCGGCTTTCAGAACCAGAGCACCGTC TGGGTCTTTGGCGGCGATGGTATCAACTGGGACGGCTACGGAACTGGCACCTTGGACGGCAATGGTCAGGTCTGG TACGACTGGGCGCAGGGACGAGGCAATCTCCCCAGACGGCCGATGAACATCAACCTGCGACAACTGACCCGTAGC CGGCTCCGTCGACTGCGCTTCGTCCAGAGTCAGATGTGGACCATGGCCATCACCTACTCTCACGACGTCGACCTG GAAGACATGTACGTCAAGAGCACGTCCAACAGTCGATGGAACACGCTCAACACCGACGGTTGCGACACCATCAAC TCGGACAAGATCAACTTCCGTCGATGGCAGGTCAGCAACGGGGACGATGCCATCGCTCTCAAGGGAAACTCGACC AACATCCTCATCGAGGACAGCGTCTTCTCCCACGGCCAAGGCATAGCCGTCGGATCCATGGGACAATATCTCGGC CGAGCCGACACCATCTCCGGTCTACGCCTTCGCAACATCCGTCTCATCGACACGGCCCACGTCCTCTACGTCAAG ACATGGTCCGGTCAGTCGCGCGGATTCCCTCCCAATGGTGGAGGAGGCGGTACCGGCGTCGCCCAAGACATCGTC GTCGAAAATGTCCGCTTCCAAGGCATGAGACAGCAACCTTTCTTCTCGTGGCAGTGTGAGAATTACTCGGGTCAT GCTGGCGAGGATTGCAACTCGAGTCTCGTCAAGATTCGCAACATGCATTTCCGCGACGTCTCTGGCACCGTTGTC GATGCCGTTACCGATATCGGATCCTTGCAGTGCAGTTCCGCTGCTGGTGGTTGCAACGATATCAGTGCTGATCAC GTCTCGGCCAAGACGCTTGGTGGTCGTGAGCTCACGTCGTGGCATTGCGAGAATGTCCATGGAAACGTCGGCTTT GCCTGCAACGGTGGCGATAAAAAGCAG |
| Transcript | >Ophio5|1190 ATGCATCACCAACACTCACCTTCTCTCAACCTCCGGGCGGTCATGGCCCTCGGATTCTTGCTGCTGCAAACAGCG CTGGCCCTTCCATCGGCCACGCATCGCGGCGGCGTAGGTCCGGCAAGCAAGCGGGCGACAGCGGGCGAAGAGGCG CCGAGCATGACGCAGATTCAGCAGCAGGCCCGAGACGAGCGCCGAGCGCTATGTGCCATCTGGCCGAGGAGCGAC GGCGGCGACGACGGGCCGGCCATTTCGGCCGCCCTCACGGGACGCTGTCGACAGCGTGGTCTGGTCTACCTCCCC GGAACCGTGTATAATATCAAGACGCCGATGACGACCATGGGCCTCAGCGATGTGCGAATCGTCCAGCTGGGGAGG CTGCTCTGGAGTCCGGATATCCAATACTGGCTGTCGGTCTCGATGCCGGTCGGCTTTCAGAACCAGAGCACCGTC TGGGTCTTTGGCGGCGATGGTATCAACTGGGACGGCTACGGAACTGGCACCTTGGACGGCAATGGTCAGGTCTGG TACGACTGGGCGCAGGGACGAGGCAATCTCCCCAGACGGCCGATGAACATCAACCTGCGACAACTGACCCGTAGC CGGCTCCGTCGACTGCGCTTCGTCCAGAGTCAGATGTGGACCATGGCCATCACCTACTCTCACGACGTCGACCTG GAAGACATGTACGTCAAGAGCACGTCCAACAGTCGATGGAACACGCTCAACACCGACGGTTGCGACACCATCAAC TCGGACAAGATCAACTTCCGTCGATGGCAGGTCAGCAACGGGGACGATGCCATCGCTCTCAAGGGAAACTCGACC AACATCCTCATCGAGGACAGCGTCTTCTCCCACGGCCAAGGCATAGCCGTCGGATCCATGGGACAATATCTCGGC CGAGCCGACACCATCTCCGGTCTACGCCTTCGCAACATCCGTCTCATCGACACGGCCCACGTCCTCTACGTCAAG ACATGGTCCGGTCAGTCGCGCGGATTCCCTCCCAATGGTGGAGGAGGCGGTACCGGCGTCGCCCAAGACATCGTC GTCGAAAATGTCCGCTTCCAAGGCATGAGACAGCAACCTTTCTTCTCGTGGCAGTGTGAGAATTACTCGGGTCAT GCTGGCGAGGATTGCAACTCGAGTCTCGTCAAGATTCGCAACATGCATTTCCGCGACGTCTCTGGCACCGTTGTC GATGCCGTTACCGATATCGGATCCTTGCAGTGCAGTTCCGCTGCTGGTGGTTGCAACGATATCAGTGCTGATCAC GTCTCGGCCAAGACGCTTGGTGGTCGTGAGCTCACGTCGTGGCATTGCGAGAATGTCCATGGAAACGTCGGCTTT GCCTGCAACGGTGGCGATAAAAAGCAGTAG |
| Gene | >Ophio5|1190 ATGCATCACCAACACTCACCTTCTCTCAACCTCCGGGCGGTCATGGCCCTCGGATTCTTGCTGCTGCAAACAGCG CTGGCCCTTCCATCGGCCACGCATCGCGGCGGCGTAGGTCCGGCAAGCAAGCGGGCGACAGCGGGCGAAGAGGCG CCGAGCATGACGCAGATTCAGCAGCAGGCCCGAGACGAGCGCCGAGCGCTATGTGCCATCTGGCCGAGGAGCGAC GGCGGCGACGACGGGCCGGCCATTTCGGCCGCCCTCACGGGACGCTGTCGACAGCGTGGTCTGGTCTACCTCCCC GGAACCGTGTATAATATCAAGACGCCGATGACGACCATGGGCCTCAGCGATGTGCGAATCGTCCAGCTGGGGAGG CTGCTCTGGAGTCCGGATATCCAATACTGGCTGTCGGTCTCGATGCCGGTCGGCTTTCAGAACCAGAGCACCGTC TGGGTCTTTGGCGGCGATGGTATCAACTGGGACGGCTACGGAACTGGCACCTTGGACGGCAATGGTCAGGTCTGG TACGACTGGGCGCAGGGACGAGGCAATCTCCCCAGACGGCCGATGAACATCAACCTGCGACAACTGACCCGTAGC CGGCTCCGTCGACTGCGCTTCGTCCAGAGTCAGATGTGGACCATGGCCATCACCTACTCTCACGACGTCGACCTG GAAGACATGTACGTCAAGAGCACGTCCAACAGTCGATGGAACACGCTCAACACCGACGGTTGCGACACCATCAAC TCGGACAAGATCAACTTCCGTCGATGGCAGGTCAGCAACGGGGACGATGCCATCGCTCTCAAGGGAAACTCGACC AACATCCTCATCGAGGACAGCGTCTTCTCCCACGGCCAAGGCATAGCCGTCGGATCCATGGGACAATATCTCGGC CGAGCCGACACCATCTCCGGTCTACGCCTTCGCAACATCCGTCTCATCGACACGGCCCACGTCCTCTACGTCAAG ACATGGTCCGGTCAGTCGCGCGGATTCCCTCCCAATGGTGGAGGAGGCGGTACCGGCGTCGCCCAAGACATCGTC GTCGAAAATGTCCGCTTCCAAGGCATGAGACAGCAACCTTTCTTCTCGTGGCAGTGTGAGAATTACTCGGGTCAT GCTGGCGAGGATTGCAACTCGAGTCTCGTCAAGATTCGCAACATGCATTTCCGCGACGTCTCTGGCACCGTTGTC GATGCCGTTACCGATATCGGATCCTTGCAGTGCAGTTCCGCTGCTGGTGGTTGCAACGATATCAGTGCTGATCAC GTCTCGGCCAAGACGCTTGGTGGTCGTGAGCTCACGTCGTGGCATTGCGAGAATGTCCATGGAAACGTCGGCTTT GCCTGCAACGGTGGCGATAAAAAGCAGTAG |