Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1189
Gene name
Locationscaffold_1381:1208..1698
Strand-
Gene length (bp)490
Transcript length (bp)423
Coding sequence length (bp)420
Protein length (aa) 140

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10270 MMgT Membrane magnesium transporter 4.6E-33 11 130

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 49 71 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1189
MAWVSRCVIATGLLLLAHACYSAQEHATLSLTSSMFAHFSKGQHPVTVLPIDICIETLVATIILCFGLVLGSQKL
RPIKWHVWAGKIEREGAAGFLDGSRKVDKEYRGSPFGVLESRPGFINIRQQRRDFAQWSQKVSGR
Coding >Ophio5|1189
ATGGCGTGGGTCTCGCGGTGCGTGATTGCGACGGGGCTTTTACTTTTGGCCCATGCCTGCTATTCTGCCCAGGAA
CATGCCACGCTATCTCTGACGTCGTCCATGTTTGCACATTTCTCCAAGGGCCAGCATCCCGTAACAGTGCTACCG
ATCGACATCTGCATTGAGACGCTGGTGGCGACCATCATTCTGTGCTTCGGCCTTGTTCTCGGTTCACAGAAGCTG
CGACCCATCAAGTGGCACGTTTGGGCCGGCAAAATCGAGCGCGAAGGTGCCGCTGGCTTTCTGGATGGGTCAAGA
AAGGTCGACAAAGAGTATCGTGGAAGTCCCTTTGGCGTCTTGGAGAGTCGGCCAGGTTTCATCAACATCCGCCAG
CAGCGACGTGACTTTGCGCAATGGTCGCAGAAGGTCAGCGGCAGA
Transcript >Ophio5|1189
ATGGCGTGGGTCTCGCGGTGCGTGATTGCGACGGGGCTTTTACTTTTGGCCCATGCCTGCTATTCTGCCCAGGAA
CATGCCACGCTATCTCTGACGTCGTCCATGTTTGCACATTTCTCCAAGGGCCAGCATCCCGTAACAGTGCTACCG
ATCGACATCTGCATTGAGACGCTGGTGGCGACCATCATTCTGTGCTTCGGCCTTGTTCTCGGTTCACAGAAGCTG
CGACCCATCAAGTGGCACGTTTGGGCCGGCAAAATCGAGCGCGAAGGTGCCGCTGGCTTTCTGGATGGGTCAAGA
AAGGTCGACAAAGAGTATCGTGGAAGTCCCTTTGGCGTCTTGGAGAGTCGGCCAGGTTTCATCAACATCCGCCAG
CAGCGACGTGACTTTGCGCAATGGTCGCAGAAGGTCAGCGGCAGATGA
Gene >Ophio5|1189
ATGGCGTGGGTCTCGCGGTGCGTGATTGCGACGGGGCTTTTACTTTTGGCCCATGCGTGAGTCGGCCATTGCCGT
TGGACACGAGGATGCCACTTAGCCACTGCTAACCCTTTCATCGGGCAGCTGCTATTCTGCCCAGGAACATGCCAC
GCTATCTCTGACGTCGTCCATGTTTGCACATTTCTCCAAGGGCCAGCATCCCGTAACAGTGCTACCGATCGACAT
CTGCATTGAGACGCTGGTGGCGACCATCATTCTGTGCTTCGGCCTTGTTCTCGGTTCACAGAAGCTGCGACCCAT
CAAGTGGCACGTTTGGGCCGGCAAAATCGAGCGCGAAGGTGCCGCTGGCTTTCTGGATGGGTCAAGAAAGGTCGA
CAAAGAGTATCGTGGAAGTCCCTTTGGCGTCTTGGAGAGTCGGCCAGGTTTCATCAACATCCGCCAGCAGCGACG
TGACTTTGCGCAATGGTCGCAGAAGGTCAGCGGCAGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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