© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|114 |
| Gene name | |
| Location | scaffold_100:25340..26338 |
| Strand | + |
| Gene length (bp) | 998 |
| Transcript length (bp) | 888 |
| Coding sequence length (bp) | 885 |
| Protein length (aa) | 295 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08538 | DUF1749 | Protein of unknown function (DUF1749) | 5.5E-79 | 7 | 290 |
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 3.2E-12 | 56 | 283 |
| PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 6.0E-08 | 85 | 249 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9C0Y8|YKM6_SCHPO | UPF0613 protein PB24D3.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.06c PE=3 SV=1 | 21 | 295 | 1.0E-38 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|114 MGSSDAPFSVLVHPYRSPSRGTCAYELGNTSARNAVIFIGGLSDGPHTTPYILTVSRRLEEASDLGYSVFEIRLR SAFTGFGTSSLKNDVEDIAALVNHLRGLGREKIVLFGHSTGCQDCMEYAHAAKHNSPPVDGFILQAPVSDRESLD LFSPDFQATLDLANSWIAQGKADDCLPRNMVPSALGAPVSAYRLHSLWAKGGDDDYFSSDLDDETVARFWHRFTK PVLVLHSERDEFVPPNIDQAALNAKYRSANALVSPLSGLIPGTGHTVLEEEARQWLARRVEQFLRTLDGQ |
| Coding | >Ophio5|114 ATGGGCTCGAGCGACGCGCCATTCTCCGTGCTCGTCCATCCGTACCGCTCCCCGTCCCGAGGCACCTGCGCCTAT GAATTGGGCAATACGTCGGCACGCAATGCCGTCATCTTCATCGGCGGCCTCTCGGACGGTCCGCACACGACGCCG TATATCCTCACGGTATCGAGACGGCTAGAAGAGGCTAGCGACCTCGGCTACTCCGTCTTTGAGATACGGCTGAGA AGCGCATTTACCGGGTTCGGCACGTCGAGCCTCAAGAATGACGTGGAGGACATAGCGGCCCTCGTCAACCATCTC CGCGGTCTGGGCAGGGAGAAGATTGTCTTGTTTGGCCATTCAACCGGCTGTCAAGACTGCATGGAATACGCGCAC GCCGCCAAGCACAATAGTCCACCTGTAGACGGCTTCATCCTACAGGCGCCAGTGTCAGATCGGGAGTCTTTGGAC TTGTTTTCGCCAGACTTTCAAGCGACTCTGGACCTGGCTAACAGTTGGATTGCGCAAGGCAAGGCGGACGATTGC CTTCCTCGTAACATGGTCCCCAGCGCGCTTGGGGCCCCTGTGTCGGCCTACAGACTGCATTCGCTTTGGGCCAAG GGGGGCGACGACGACTACTTCTCTTCCGACTTGGACGACGAGACGGTCGCCCGGTTCTGGCACAGATTCACGAAG CCAGTCTTGGTGCTGCACTCGGAGCGGGACGAGTTTGTGCCGCCCAACATTGACCAGGCGGCGCTGAACGCCAAG TACCGTAGCGCGAATGCCCTTGTGAGTCCTCTCTCCGGGCTGATACCCGGCACGGGCCATACCGTCTTGGAGGAG GAGGCTCGCCAATGGCTGGCCAGGCGAGTCGAACAGTTTCTGCGCACGCTGGACGGGCAG |
| Transcript | >Ophio5|114 ATGGGCTCGAGCGACGCGCCATTCTCCGTGCTCGTCCATCCGTACCGCTCCCCGTCCCGAGGCACCTGCGCCTAT GAATTGGGCAATACGTCGGCACGCAATGCCGTCATCTTCATCGGCGGCCTCTCGGACGGTCCGCACACGACGCCG TATATCCTCACGGTATCGAGACGGCTAGAAGAGGCTAGCGACCTCGGCTACTCCGTCTTTGAGATACGGCTGAGA AGCGCATTTACCGGGTTCGGCACGTCGAGCCTCAAGAATGACGTGGAGGACATAGCGGCCCTCGTCAACCATCTC CGCGGTCTGGGCAGGGAGAAGATTGTCTTGTTTGGCCATTCAACCGGCTGTCAAGACTGCATGGAATACGCGCAC GCCGCCAAGCACAATAGTCCACCTGTAGACGGCTTCATCCTACAGGCGCCAGTGTCAGATCGGGAGTCTTTGGAC TTGTTTTCGCCAGACTTTCAAGCGACTCTGGACCTGGCTAACAGTTGGATTGCGCAAGGCAAGGCGGACGATTGC CTTCCTCGTAACATGGTCCCCAGCGCGCTTGGGGCCCCTGTGTCGGCCTACAGACTGCATTCGCTTTGGGCCAAG GGGGGCGACGACGACTACTTCTCTTCCGACTTGGACGACGAGACGGTCGCCCGGTTCTGGCACAGATTCACGAAG CCAGTCTTGGTGCTGCACTCGGAGCGGGACGAGTTTGTGCCGCCCAACATTGACCAGGCGGCGCTGAACGCCAAG TACCGTAGCGCGAATGCCCTTGTGAGTCCTCTCTCCGGGCTGATACCCGGCACGGGCCATACCGTCTTGGAGGAG GAGGCTCGCCAATGGCTGGCCAGGCGAGTCGAACAGTTTCTGCGCACGCTGGACGGGCAGTGA |
| Gene | >Ophio5|114 ATGGGCTCGAGCGACGCGCCATTCTCCGTGCTCGTCCATCCGTACCGCTCCCCGTCCCGAGGCACCTGCGCCTAT GAATTGGGCAATACGTCGGCACGCAATGCCGTCATCTTCATCGGCGGCCTCTCGGACGGTCCGCACACGACGCCG TATATCCTCACGGTATCGAGACGGCTAGAAGAGGCTAGCGACCTCGGCTACTCCGTCTTTGAGATACGGCTGAGA AGCGCATTTACCGGGTTCGGCACGTCGAGCCTCAAGAATGACGTGGAGGACATAGCGGCCCTCGTCAACCATCTC CGCGGTCTGGGCAGGGAGAAGATTGTCTTGTTTGGCCATTCAACCGGCTGTCAAGTACGTTGCCTGGCCTCTCAC GGCGGCCGCTAACGGTCGGCCACAGGACTGCATGGAATACGCGCACGCCGCCAAGCACAATAGTCCACCTGTAGA CGGCTTCATCCTACAGGCGCCAGTGTCAGATCGGGAGTCTTTGGACTTGTTTTCGCCAGACTTTCAAGCGACTCT GGACCTGGCTAACAGTTGGATTGCGCAAGGCAAGGCGGACGATTGCCTTCCTCGTAACATGGTCCCCAGCGCGCT TGGGGCCCCTGTGTCGGCCTACAGACTGCATTCGCTTTGGGCCAAGGGGTAGGCGTTCCGCCGTCGACAAGTCTG TGACTAGATACGAACAGGCAGGGTTGACACGCGCCAGGGGCGACGACGACTACTTCTCTTCCGACTTGGACGACG AGACGGTCGCCCGGTTCTGGCACAGATTCACGAAGCCAGTCTTGGTGCTGCACTCGGAGCGGGACGAGTTTGTGC CGCCCAACATTGACCAGGCGGCGCTGAACGCCAAGTACCGTAGCGCGAATGCCCTTGTGAGTCCTCTCTCCGGGC TGATACCCGGCACGGGCCATACCGTCTTGGAGGAGGAGGCTCGCCAATGGCTGGCCAGGCGAGTCGAACAGTTTC TGCGCACGCTGGACGGGCAGTGA |