Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|1109
Gene name
Location	scaffold_134:38554..39341
Strand	+
Gene length (bp)	787
Transcript length (bp)	684
Coding sequence length (bp)	681
Protein length (aa)	227

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06884	DUF1264	Protein of unknown function (DUF1264)	3.1E-76	32	204

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 50	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|1109 MDDLPAINKAPGDPVSAENTVLTSVASMTQDFAPLKSVCAHLNAFHAYADEPTRSVETNHYCGHLNDDVRQCLLY DSASRDARLIGIEYMITPRIYESLPHEERILWHSHVYEVKSGMLIMPNNNVPSSAWDLAETREMGQIVLLYGKAY HLWQTDRGDALPLGTPKLMTSYTADGQLGWEAVTKRDERFGTDYKAKREARRDIAEPQVHAGEFSSVLGVVRGVA DF
Coding	>Ophio5\|1109 ATGGACGACCTTCCCGCCATTAACAAGGCCCCGGGAGACCCCGTCTCGGCCGAAAACACGGTCCTCACCTCAGTC GCCTCCATGACCCAGGACTTTGCCCCTCTAAAGAGCGTCTGCGCCCATCTCAACGCCTTTCACGCCTACGCTGAT GAGCCCACCCGCAGCGTAGAGACGAATCATTATTGCGGCCACCTCAACGACGACGTCCGACAATGCCTCCTCTAC GACTCGGCCTCTCGCGACGCCCGCCTCATCGGTATAGAATACATGATCACCCCACGCATCTACGAAAGCCTCCCC CACGAAGAGCGCATCCTCTGGCACTCACACGTGTACGAGGTGAAGTCCGGCATGCTCATCATGCCCAACAACAAC GTGCCAAGTTCGGCATGGGACTTGGCCGAGACGCGAGAAATGGGTCAAATCGTTTTGCTGTATGGTAAAGCGTAC CATCTTTGGCAGACGGATCGGGGCGATGCGTTACCGCTGGGGACGCCTAAACTCATGACGAGCTACACGGCTGAC GGGCAACTTGGGTGGGAGGCGGTGACGAAGAGGGATGAGAGGTTTGGGACGGACTATAAGGCTAAGCGGGAGGCC CGGCGGGACATTGCTGAGCCGCAGGTTCATGCCGGTGAGTTTTCGTCGGTCTTGGGCGTGGTCCGAGGCGTGGCT GACTTT
Transcript	>Ophio5\|1109 ATGGACGACCTTCCCGCCATTAACAAGGCCCCGGGAGACCCCGTCTCGGCCGAAAACACGGTCCTCACCTCAGTC GCCTCCATGACCCAGGACTTTGCCCCTCTAAAGAGCGTCTGCGCCCATCTCAACGCCTTTCACGCCTACGCTGAT GAGCCCACCCGCAGCGTAGAGACGAATCATTATTGCGGCCACCTCAACGACGACGTCCGACAATGCCTCCTCTAC GACTCGGCCTCTCGCGACGCCCGCCTCATCGGTATAGAATACATGATCACCCCACGCATCTACGAAAGCCTCCCC CACGAAGAGCGCATCCTCTGGCACTCACACGTGTACGAGGTGAAGTCCGGCATGCTCATCATGCCCAACAACAAC GTGCCAAGTTCGGCATGGGACTTGGCCGAGACGCGAGAAATGGGTCAAATCGTTTTGCTGTATGGTAAAGCGTAC CATCTTTGGCAGACGGATCGGGGCGATGCGTTACCGCTGGGGACGCCTAAACTCATGACGAGCTACACGGCTGAC GGGCAACTTGGGTGGGAGGCGGTGACGAAGAGGGATGAGAGGTTTGGGACGGACTATAAGGCTAAGCGGGAGGCC CGGCGGGACATTGCTGAGCCGCAGGTTCATGCCGGTGAGTTTTCGTCGGTCTTGGGCGTGGTCCGAGGCGTGGCT GACTTTTAG
Gene	>Ophio5\|1109 ATGGACGACCTTCCCGCCATTAACAAGGCCCCGGGAGACCCCGTCTCGGCCGAAAACACGGTCCTCACCTCAGTC GCCTCCATGACCCAGGCGAGCGCCAAAACTCCCACAAAGGCTATTTGATGCTAACCAAGGAGCAGGACTTTGCCC CTCTAAAGAGCGTCTGCGCCCATCTCAACGCCTTTCACGCCTACGCTGATGAGCCCACCCGCAGCGTAGAGACGA ATCATTATTGCGGCCACCTCAGTACGCTGTCATGCCCCATCGTCATCGTTGGGCAAATTGCTCACTTCTTCCAGA CGACGACGTCCGACAATGCCTCCTCTACGACTCGGCCTCTCGCGACGCCCGCCTCATCGGTATAGAATACATGAT CACCCCACGCATCTACGAAAGCCTCCCCCACGAAGAGCGCATCCTCTGGCACTCACACGTGTACGAGGTGAAGTC CGGCATGCTCATCATGCCCAACAACAACGTGCCAAGTTCGGCATGGGACTTGGCCGAGACGCGAGAAATGGGTCA AATCGTTTTGCTGTATGGTAAAGCGTACCATCTTTGGCAGACGGATCGGGGCGATGCGTTACCGCTGGGGACGCC TAAACTCATGACGAGCTACACGGCTGACGGGCAACTTGGGTGGGAGGCGGTGACGAAGAGGGATGAGAGGTTTGG GACGGACTATAAGGCTAAGCGGGAGGCCCGGCGGGACATTGCTGAGCCGCAGGTTCATGCCGGTGAGTTTTCGTC GGTCTTGGGCGTGGTCCGAGGCGTGGCTGACTTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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