Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1109
Gene name
Locationscaffold_134:38554..39341
Strand+
Gene length (bp)787
Transcript length (bp)684
Coding sequence length (bp)681
Protein length (aa) 227

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06884 DUF1264 Protein of unknown function (DUF1264) 3.1E-76 32 204

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1109
MDDLPAINKAPGDPVSAENTVLTSVASMTQDFAPLKSVCAHLNAFHAYADEPTRSVETNHYCGHLNDDVRQCLLY
DSASRDARLIGIEYMITPRIYESLPHEERILWHSHVYEVKSGMLIMPNNNVPSSAWDLAETREMGQIVLLYGKAY
HLWQTDRGDALPLGTPKLMTSYTADGQLGWEAVTKRDERFGTDYKAKREARRDIAEPQVHAGEFSSVLGVVRGVA
DF
Coding >Ophio5|1109
ATGGACGACCTTCCCGCCATTAACAAGGCCCCGGGAGACCCCGTCTCGGCCGAAAACACGGTCCTCACCTCAGTC
GCCTCCATGACCCAGGACTTTGCCCCTCTAAAGAGCGTCTGCGCCCATCTCAACGCCTTTCACGCCTACGCTGAT
GAGCCCACCCGCAGCGTAGAGACGAATCATTATTGCGGCCACCTCAACGACGACGTCCGACAATGCCTCCTCTAC
GACTCGGCCTCTCGCGACGCCCGCCTCATCGGTATAGAATACATGATCACCCCACGCATCTACGAAAGCCTCCCC
CACGAAGAGCGCATCCTCTGGCACTCACACGTGTACGAGGTGAAGTCCGGCATGCTCATCATGCCCAACAACAAC
GTGCCAAGTTCGGCATGGGACTTGGCCGAGACGCGAGAAATGGGTCAAATCGTTTTGCTGTATGGTAAAGCGTAC
CATCTTTGGCAGACGGATCGGGGCGATGCGTTACCGCTGGGGACGCCTAAACTCATGACGAGCTACACGGCTGAC
GGGCAACTTGGGTGGGAGGCGGTGACGAAGAGGGATGAGAGGTTTGGGACGGACTATAAGGCTAAGCGGGAGGCC
CGGCGGGACATTGCTGAGCCGCAGGTTCATGCCGGTGAGTTTTCGTCGGTCTTGGGCGTGGTCCGAGGCGTGGCT
GACTTT
Transcript >Ophio5|1109
ATGGACGACCTTCCCGCCATTAACAAGGCCCCGGGAGACCCCGTCTCGGCCGAAAACACGGTCCTCACCTCAGTC
GCCTCCATGACCCAGGACTTTGCCCCTCTAAAGAGCGTCTGCGCCCATCTCAACGCCTTTCACGCCTACGCTGAT
GAGCCCACCCGCAGCGTAGAGACGAATCATTATTGCGGCCACCTCAACGACGACGTCCGACAATGCCTCCTCTAC
GACTCGGCCTCTCGCGACGCCCGCCTCATCGGTATAGAATACATGATCACCCCACGCATCTACGAAAGCCTCCCC
CACGAAGAGCGCATCCTCTGGCACTCACACGTGTACGAGGTGAAGTCCGGCATGCTCATCATGCCCAACAACAAC
GTGCCAAGTTCGGCATGGGACTTGGCCGAGACGCGAGAAATGGGTCAAATCGTTTTGCTGTATGGTAAAGCGTAC
CATCTTTGGCAGACGGATCGGGGCGATGCGTTACCGCTGGGGACGCCTAAACTCATGACGAGCTACACGGCTGAC
GGGCAACTTGGGTGGGAGGCGGTGACGAAGAGGGATGAGAGGTTTGGGACGGACTATAAGGCTAAGCGGGAGGCC
CGGCGGGACATTGCTGAGCCGCAGGTTCATGCCGGTGAGTTTTCGTCGGTCTTGGGCGTGGTCCGAGGCGTGGCT
GACTTTTAG
Gene >Ophio5|1109
ATGGACGACCTTCCCGCCATTAACAAGGCCCCGGGAGACCCCGTCTCGGCCGAAAACACGGTCCTCACCTCAGTC
GCCTCCATGACCCAGGCGAGCGCCAAAACTCCCACAAAGGCTATTTGATGCTAACCAAGGAGCAGGACTTTGCCC
CTCTAAAGAGCGTCTGCGCCCATCTCAACGCCTTTCACGCCTACGCTGATGAGCCCACCCGCAGCGTAGAGACGA
ATCATTATTGCGGCCACCTCAGTACGCTGTCATGCCCCATCGTCATCGTTGGGCAAATTGCTCACTTCTTCCAGA
CGACGACGTCCGACAATGCCTCCTCTACGACTCGGCCTCTCGCGACGCCCGCCTCATCGGTATAGAATACATGAT
CACCCCACGCATCTACGAAAGCCTCCCCCACGAAGAGCGCATCCTCTGGCACTCACACGTGTACGAGGTGAAGTC
CGGCATGCTCATCATGCCCAACAACAACGTGCCAAGTTCGGCATGGGACTTGGCCGAGACGCGAGAAATGGGTCA
AATCGTTTTGCTGTATGGTAAAGCGTACCATCTTTGGCAGACGGATCGGGGCGATGCGTTACCGCTGGGGACGCC
TAAACTCATGACGAGCTACACGGCTGACGGGCAACTTGGGTGGGAGGCGGTGACGAAGAGGGATGAGAGGTTTGG
GACGGACTATAAGGCTAAGCGGGAGGCCCGGCGGGACATTGCTGAGCCGCAGGTTCATGCCGGTGAGTTTTCGTC
GGTCTTGGGCGTGGTCCGAGGCGTGGCTGACTTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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