© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|1107 |
| Gene name | |
| Location | scaffold_134:32984..34592 |
| Strand | - |
| Gene length (bp) | 1608 |
| Transcript length (bp) | 1455 |
| Coding sequence length (bp) | 1452 |
| Protein length (aa) | 484 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01494 | FAD_binding_3 | FAD binding domain | 1.3E-27 | 12 | 345 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 3.4E-07 | 14 | 44 |
| PF00890 | FAD_binding_2 | FAD binding domain | 8.8E-05 | 12 | 42 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9I0Q0|PQSH_PSEAE | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pqsH PE=3 SV=1 | 10 | 395 | 6.0E-23 |
| sp|Q02N79|PQSH_PSEAB | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pqsH PE=1 SV=1 | 10 | 395 | 3.0E-21 |
| sp|A6T923|HPXO_KLEP7 | FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hpxO PE=1 SV=1 | 10 | 374 | 2.0E-19 |
| sp|B6D1N4|HPXO_KLEPN | FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae GN=hpxO PE=3 SV=1 | 10 | 374 | 5.0E-19 |
| sp|P9WM51|Y1260_MYCTU | Uncharacterized protein Rv1260 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1260 PE=1 SV=1 | 13 | 372 | 9.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9I0Q0|PQSH_PSEAE | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pqsH PE=3 SV=1 | 10 | 395 | 6.0E-23 |
| sp|Q02N79|PQSH_PSEAB | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pqsH PE=1 SV=1 | 10 | 395 | 3.0E-21 |
| sp|A6T923|HPXO_KLEP7 | FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hpxO PE=1 SV=1 | 10 | 374 | 2.0E-19 |
| sp|B6D1N4|HPXO_KLEPN | FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae GN=hpxO PE=3 SV=1 | 10 | 374 | 5.0E-19 |
| sp|P9WM51|Y1260_MYCTU | Uncharacterized protein Rv1260 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1260 PE=1 SV=1 | 13 | 372 | 9.0E-12 |
| sp|P9WM50|Y1260_MYCTO | Uncharacterized protein MT1298 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1298 PE=4 SV=1 | 13 | 372 | 9.0E-12 |
| sp|Q9F131|3HBH1_PSEAC | 3-hydroxybenzoate 6-hydroxylase 1 OS=Pseudomonas alcaligenes GN=xlnD PE=1 SV=1 | 13 | 340 | 3.0E-10 |
| sp|Q88FY2|6HN3M_PSEPK | 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas putida (strain KT2440) GN=nicC PE=1 SV=1 | 32 | 394 | 6.0E-10 |
| sp|P86491|6HN3M_PSEFL | 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas fluorescens PE=1 SV=1 | 48 | 375 | 8.0E-10 |
| sp|Q93NG3|DHPH_ARTNI | 2,6-dihydroxypyridine 3-monooxygenase OS=Arthrobacter nicotinovorans GN=dhpH PE=1 SV=1 | 11 | 340 | 4.0E-09 |
| sp|O07561|YHJG_BACSU | Uncharacterized aromatic compound monooxygenase YhjG OS=Bacillus subtilis (strain 168) GN=yhjG PE=3 SV=1 | 9 | 336 | 8.0E-09 |
| sp|P93236|ABA2_SOLLC | Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1 | 9 | 351 | 7.0E-08 |
| sp|A0R1T4|MHPA_MYCS2 | 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=mhpA PE=3 SV=2 | 5 | 336 | 2.0E-07 |
| sp|B5B0J6|HPXO_KLEOX | FAD-dependent urate hydroxylase OS=Klebsiella oxytoca GN=hpxO PE=3 SV=1 | 10 | 343 | 4.0E-07 |
| sp|Q01911|TETX_BACFG | Tetracycline resistance protein from transposon Tn4351/Tn4400 OS=Bacteroides fragilis GN=tetX PE=4 SV=1 | 14 | 172 | 3.0E-06 |
| sp|Q40412|ABA2_NICPL | Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1 | 9 | 185 | 4.0E-06 |
| sp|A0QB57|MHPA_MYCA1 | 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase OS=Mycobacterium avium (strain 104) GN=mhpA PE=3 SV=1 | 1 | 336 | 4.0E-06 |
| sp|Q742Z1|MHPA_MYCPA | 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=mhpA PE=3 SV=1 | 1 | 336 | 4.0E-06 |
| sp|A4T8B6|MHPA_MYCGI | 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase OS=Mycobacterium gilvum (strain PYR-GCK) GN=mhpA PE=3 SV=1 | 13 | 336 | 8.0E-06 |
| sp|D4B1Y1|A2462_ARTBC | Probable FAD-dependent monooxygenase OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02462 PE=3 SV=1 | 6 | 184 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0071949 | FAD binding | Yes |
| GO:0036094 | small molecule binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003674 | molecular_function | No |
| GO:0043167 | ion binding | No |
| GO:0043168 | anion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0050660 | flavin adenine dinucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 458 | 480 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1107 MVAPESSARLRAIIVGAGIGGLTTAHALHRAGIDYVVVEKHDDVLKPFGSTITLHPGQLRILHQLGLLDRLKTLA RPYNRGGEFRDSDGRLLSKFDLSSMRIKHGEAGMLMNRESLIKILYEALPDKSKVLTGRLIVAIAHEADSVQVQL SDGLSETGHLIIGADGVHSVVRSAMWEHADATNPGLIPPEDKKVVGCKWKLIWASGPEDPRLSNDVTVGSFPGRR CSIVLSQPGIATFIMIWKTSEAGPRSSQRRKYTAEDAEELMASIARLPVNESVTFGDLWKNRFRQGMSDTQVGVM KRWHHGRIVLVGDATFSITPTTGLGANMCIENVAALVNALHEAVVEATRQGRGRPTGSDLEAAFHKYRDRQWPRT LYSYRFANFFDRLYSWDTPWMRFWACCVARTLSMVLLPKLLSDHARGVPVLKFVDLVGWPEGRIRWEHGEEEKGG GGGGRGGALAWMLLAVVVLLGAVGLAFVMGGGGI |
| Coding | >Ophio5|1107 ATGGTCGCTCCAGAATCAAGCGCTCGGCTCCGTGCCATCATCGTGGGCGCCGGCATTGGCGGCCTGACGACGGCT CACGCACTGCACCGGGCCGGTATTGACTACGTCGTCGTGGAGAAGCACGATGATGTGCTCAAGCCTTTCGGGTCA ACCATTACTCTGCACCCCGGGCAACTGAGGATCCTACATCAGCTGGGGCTCCTGGACAGGCTCAAGACCCTCGCA CGTCCCTATAACCGAGGCGGTGAATTTCGAGACTCAGACGGGCGGCTGCTCTCCAAATTTGACCTATCCTCCATG CGCATCAAACATGGGGAAGCCGGTATGCTTATGAACCGCGAATCCCTCATCAAGATTCTCTACGAGGCGCTGCCC GACAAGTCCAAGGTTCTCACGGGCAGGCTCATTGTGGCCATTGCACATGAAGCGGATAGCGTGCAGGTCCAATTA TCAGACGGCCTCTCCGAGACGGGCCATCTGATCATTGGAGCAGACGGCGTACACAGCGTCGTGCGAAGCGCAATG TGGGAGCATGCGGATGCCACAAATCCGGGGCTGATACCCCCAGAGGACAAGAAGGTGGTGGGGTGTAAATGGAAG CTCATTTGGGCCTCGGGCCCGGAAGACCCACGGCTGAGCAATGATGTCACCGTCGGCAGTTTTCCCGGCCGGCGC TGCTCAATCGTTCTTTCGCAGCCGGGAATCGCGACCTTCATCATGATATGGAAGACGAGCGAGGCGGGACCGCGC AGCAGCCAGCGGCGCAAGTACACGGCTGAGGACGCCGAGGAACTTATGGCGTCGATTGCTCGTCTGCCCGTTAAC GAGAGTGTGACGTTTGGCGATCTGTGGAAGAATAGGTTTCGACAGGGAATGTCGGACACTCAGGTTGGCGTTATG AAACGCTGGCACCACGGACGCATCGTCCTTGTCGGCGATGCAACCTTCAGCATAACACCGACCACCGGCCTCGGC GCCAACATGTGCATCGAGAACGTCGCCGCCCTCGTCAACGCCCTCCACGAAGCCGTAGTCGAGGCAACAAGGCAG GGACGAGGCCGCCCTACCGGCTCCGACCTCGAGGCCGCTTTCCACAAGTATCGAGATCGCCAATGGCCGCGTACG CTCTACTCGTACCGCTTCGCCAACTTTTTCGACCGTCTGTATTCATGGGATACGCCGTGGATGAGGTTCTGGGCT TGTTGTGTGGCTCGTACGTTGTCCATGGTCTTGTTGCCCAAACTGCTTAGCGACCATGCCCGCGGGGTCCCCGTC TTGAAATTTGTCGACCTGGTCGGCTGGCCCGAGGGGAGGATTCGCTGGGAGCATGGGGAGGAGGAAAAGGGAGGA GGCGGAGGAGGACGAGGAGGCGCTCTGGCTTGGATGCTCTTGGCCGTTGTTGTGCTGCTTGGTGCTGTGGGGTTG GCTTTTGTTATGGGCGGTGGTGGCATT |
| Transcript | >Ophio5|1107 ATGGTCGCTCCAGAATCAAGCGCTCGGCTCCGTGCCATCATCGTGGGCGCCGGCATTGGCGGCCTGACGACGGCT CACGCACTGCACCGGGCCGGTATTGACTACGTCGTCGTGGAGAAGCACGATGATGTGCTCAAGCCTTTCGGGTCA ACCATTACTCTGCACCCCGGGCAACTGAGGATCCTACATCAGCTGGGGCTCCTGGACAGGCTCAAGACCCTCGCA CGTCCCTATAACCGAGGCGGTGAATTTCGAGACTCAGACGGGCGGCTGCTCTCCAAATTTGACCTATCCTCCATG CGCATCAAACATGGGGAAGCCGGTATGCTTATGAACCGCGAATCCCTCATCAAGATTCTCTACGAGGCGCTGCCC GACAAGTCCAAGGTTCTCACGGGCAGGCTCATTGTGGCCATTGCACATGAAGCGGATAGCGTGCAGGTCCAATTA TCAGACGGCCTCTCCGAGACGGGCCATCTGATCATTGGAGCAGACGGCGTACACAGCGTCGTGCGAAGCGCAATG TGGGAGCATGCGGATGCCACAAATCCGGGGCTGATACCCCCAGAGGACAAGAAGGTGGTGGGGTGTAAATGGAAG CTCATTTGGGCCTCGGGCCCGGAAGACCCACGGCTGAGCAATGATGTCACCGTCGGCAGTTTTCCCGGCCGGCGC TGCTCAATCGTTCTTTCGCAGCCGGGAATCGCGACCTTCATCATGATATGGAAGACGAGCGAGGCGGGACCGCGC AGCAGCCAGCGGCGCAAGTACACGGCTGAGGACGCCGAGGAACTTATGGCGTCGATTGCTCGTCTGCCCGTTAAC GAGAGTGTGACGTTTGGCGATCTGTGGAAGAATAGGTTTCGACAGGGAATGTCGGACACTCAGGTTGGCGTTATG AAACGCTGGCACCACGGACGCATCGTCCTTGTCGGCGATGCAACCTTCAGCATAACACCGACCACCGGCCTCGGC GCCAACATGTGCATCGAGAACGTCGCCGCCCTCGTCAACGCCCTCCACGAAGCCGTAGTCGAGGCAACAAGGCAG GGACGAGGCCGCCCTACCGGCTCCGACCTCGAGGCCGCTTTCCACAAGTATCGAGATCGCCAATGGCCGCGTACG CTCTACTCGTACCGCTTCGCCAACTTTTTCGACCGTCTGTATTCATGGGATACGCCGTGGATGAGGTTCTGGGCT TGTTGTGTGGCTCGTACGTTGTCCATGGTCTTGTTGCCCAAACTGCTTAGCGACCATGCCCGCGGGGTCCCCGTC TTGAAATTTGTCGACCTGGTCGGCTGGCCCGAGGGGAGGATTCGCTGGGAGCATGGGGAGGAGGAAAAGGGAGGA GGCGGAGGAGGACGAGGAGGCGCTCTGGCTTGGATGCTCTTGGCCGTTGTTGTGCTGCTTGGTGCTGTGGGGTTG GCTTTTGTTATGGGCGGTGGTGGCATTTAG |
| Gene | >Ophio5|1107 ATGGTCGCTCCAGAATCAAGCGCTCGGCTCCGTGCCATCATCGTGGGCGCCGGCATTGGCGGCCTGACGACGGCT CACGCACTGCACCGGGCCGGTATTGACTACGTCGTCGTGGAGAAGCACGATGATGTGCTCAAGCCTTTCGGGTCA ACCATTACTCTGCACCCCGGGCAACTGAGGATCCTACATCAGCTGGGGCTCCTGGACAGGCTCAAGACCCTCGCA CGTCCCTATAACCGAGGCGGTGAATTTCGAGACTCAGACGGGCGGCTGCTCTCCAAATTTGACCTATCCTCCATG CGCATCAAGTAAGCGTGCCCATGCTCGCCCTTTTATACGCTGTGCTCTGACGAAGCCCGCCAGACATGGGGAAGC CGGTATGCTTATGAACCGCGAATCCCTCATCAAGATTCTCTACGAGGCGCTGCCCGACAAGTCCAAGGTTCTCAC GGGCAGGCTCATTGTGGCCATTGCACATGAAGCGGATAGCGTGCAGGTCCAATTATCAGACGGCCTCTCCGAGAC GGGCCATCTGATCATTGGAGCAGACGGCGTACACAGCGTCGTGCGAAGCGCAATGTGGGAGCATGCGGATGCCAC AAATCCGGGGCTGATACCCCCAGAGGACAAGAAGGGTAAAGACTTTCCGTCTTGGATTTTCGATGCGAGGCTCAC TGCTCACAGTGGTGGGGTGTAAATGGAAGCTCATTTGGGCCTCGGGCCCGGAAGACCCACGGCTGAGCAATGATG TCACCGTCGGCAGTTTTCCCGGCCGGCGCTGCTCAATCGTTCTTTCGCAGCCGGGAATCGCGACCTTCATCATGA TATGGAAGACGAGCGAGGCGGGACCGCGCAGCAGCCAGCGGCGCAAGTACACGGCTGAGGACGCCGAGGAACTTA TGGCGTCGATTGCTCGTCTGCCCGTTAACGAGAGTGTGACGTTTGGCGATCTGTGGAAGAATAGGTTTCGACAGG GAATGTCGGACACTCAGGTTGGCGTTATGAAACGCTGGCACCACGGACGCATCGTCCTTGTCGGCGATGCAACCT TCAGCGTAGGCATCATCTCCTCCAGACGCTGTCCATCTGACACTCAGCGATCAGATAACACCGACCACCGGCCTC GGCGCCAACATGTGCATCGAGAACGTCGCCGCCCTCGTCAACGCCCTCCACGAAGCCGTAGTCGAGGCAACAAGG CAGGGACGAGGCCGCCCTACCGGCTCCGACCTCGAGGCCGCTTTCCACAAGTATCGAGATCGCCAATGGCCGCGT ACGCTCTACTCGTACCGCTTCGCCAACTTTTTCGACCGTCTGTATTCATGGGATACGCCGTGGATGAGGTTCTGG GCTTGTTGTGTGGCTCGTACGTTGTCCATGGTCTTGTTGCCCAAACTGCTTAGCGACCATGCCCGCGGGGTCCCC GTCTTGAAATTTGTCGACCTGGTCGGCTGGCCCGAGGGGAGGATTCGCTGGGAGCATGGGGAGGAGGAAAAGGGA GGAGGCGGAGGAGGACGAGGAGGCGCTCTGGCTTGGATGCTCTTGGCCGTTGTTGTGCTGCTTGGTGCTGTGGGG TTGGCTTTTGTTATGGGCGGTGGTGGCATTTAG |