Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1104
Gene name
Locationscaffold_134:23474..24961
Strand-
Gene length (bp)1487
Transcript length (bp)1296
Coding sequence length (bp)1293
Protein length (aa) 431

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 1.6E-13 21 84

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 93 115 22
2 128 150 22
3 172 194 22
4 206 228 22
5 252 274 22
6 287 309 22
7 329 351 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1104
MRPRCLLSLALALTAGVAAQAQELPACAMTCLAPAIAQSKCPITDKKCLCTDAALVKNMTACVMASCSIKEALQA
KNATATKCGEPVRDKSPGYVAVGTAFGILSSLCVIQRFAYKFWTKLDIGLDDWTTLAAMVISLPTIVFDAHIVGP
NGMGRDTWTLSPDNINNFSLYFFVMEILYFADVALIKAALLFFYVRIFPAREVRRLLYGTLALVTIFGLAFICIA
IFQCTPIDYYWRRWDGEHTGRCLNMLAIAWSNAAISIAIDIWMLAVPLWQLRSLKLDWKKKVGVAVMFCVGTFVT
VVSILRLRALDFSSHSTNPTWDFFDVGIWSTVEINVGIICVCMPSLRLLLVRLIPSLSTSSQRGYLPAGSAQHAN
SPRRREMGSKVGDNQILHQTTYAVEYDDKENGEDMRVVYLQDVDVGSLSATAENVI
Coding >Ophio5|1104
ATGCGGCCTCGTTGCCTGCTGTCTCTGGCCTTGGCCCTGACGGCGGGCGTCGCCGCTCAAGCCCAGGAATTGCCC
GCCTGCGCCATGACCTGTCTGGCCCCTGCCATCGCCCAGTCCAAGTGTCCTATCACGGATAAGAAATGTCTATGC
ACAGACGCCGCGCTCGTCAAGAACATGACGGCCTGTGTCATGGCCAGTTGCAGCATCAAGGAGGCTCTTCAAGCC
AAAAACGCAACGGCGACCAAATGCGGCGAGCCCGTTCGTGACAAGTCGCCGGGATACGTTGCCGTAGGGACGGCC
TTTGGCATCCTCTCGAGCCTCTGCGTCATCCAGCGCTTCGCCTACAAGTTCTGGACAAAACTCGACATCGGCCTC
GACGACTGGACGACGCTGGCGGCCATGGTCATTAGCCTTCCCACCATCGTCTTCGACGCCCACATCGTGGGACCC
AACGGTATGGGTCGCGATACCTGGACGCTGTCGCCCGACAACATCAACAACTTTAGCCTCTACTTTTTCGTCATG
GAGATTTTGTATTTTGCCGATGTCGCCCTCATCAAGGCGGCGCTGCTCTTCTTCTATGTCCGCATCTTTCCGGCT
CGTGAGGTGCGCAGGTTGCTGTATGGCACCTTGGCTCTCGTCACCATCTTTGGTCTCGCCTTTATCTGCATCGCC
ATCTTTCAGTGCACCCCGATCGACTATTACTGGCGGCGCTGGGACGGAGAGCACACGGGCCGCTGTCTCAACATG
CTTGCCATTGCCTGGTCTAACGCGGCCATTAGCATCGCCATCGATATCTGGATGCTGGCCGTTCCGCTGTGGCAG
CTCAGGAGCCTGAAGCTGGACTGGAAGAAGAAGGTGGGCGTGGCCGTCATGTTTTGCGTGGGGACCTTCGTCACC
GTCGTGAGCATCTTGCGTCTCCGCGCTCTCGACTTCAGCTCCCACTCAACCAACCCGACCTGGGACTTCTTCGAC
GTCGGCATCTGGTCCACCGTCGAGATCAACGTCGGCATCATATGCGTCTGTATGCCCTCCCTGCGACTGCTGCTC
GTCCGTCTCATCCCATCGCTATCGACGTCATCCCAACGCGGTTACCTCCCCGCCGGCTCTGCCCAGCACGCAAAC
TCTCCTCGTCGGAGGGAGATGGGCTCGAAAGTGGGCGATAATCAGATCTTGCATCAGACGACGTATGCCGTCGAG
TATGACGACAAGGAGAATGGTGAGGATATGCGTGTCGTTTATCTGCAAGACGTCGACGTGGGCAGCTTATCGGCG
ACGGCGGAAAACGTCATC
Transcript >Ophio5|1104
ATGCGGCCTCGTTGCCTGCTGTCTCTGGCCTTGGCCCTGACGGCGGGCGTCGCCGCTCAAGCCCAGGAATTGCCC
GCCTGCGCCATGACCTGTCTGGCCCCTGCCATCGCCCAGTCCAAGTGTCCTATCACGGATAAGAAATGTCTATGC
ACAGACGCCGCGCTCGTCAAGAACATGACGGCCTGTGTCATGGCCAGTTGCAGCATCAAGGAGGCTCTTCAAGCC
AAAAACGCAACGGCGACCAAATGCGGCGAGCCCGTTCGTGACAAGTCGCCGGGATACGTTGCCGTAGGGACGGCC
TTTGGCATCCTCTCGAGCCTCTGCGTCATCCAGCGCTTCGCCTACAAGTTCTGGACAAAACTCGACATCGGCCTC
GACGACTGGACGACGCTGGCGGCCATGGTCATTAGCCTTCCCACCATCGTCTTCGACGCCCACATCGTGGGACCC
AACGGTATGGGTCGCGATACCTGGACGCTGTCGCCCGACAACATCAACAACTTTAGCCTCTACTTTTTCGTCATG
GAGATTTTGTATTTTGCCGATGTCGCCCTCATCAAGGCGGCGCTGCTCTTCTTCTATGTCCGCATCTTTCCGGCT
CGTGAGGTGCGCAGGTTGCTGTATGGCACCTTGGCTCTCGTCACCATCTTTGGTCTCGCCTTTATCTGCATCGCC
ATCTTTCAGTGCACCCCGATCGACTATTACTGGCGGCGCTGGGACGGAGAGCACACGGGCCGCTGTCTCAACATG
CTTGCCATTGCCTGGTCTAACGCGGCCATTAGCATCGCCATCGATATCTGGATGCTGGCCGTTCCGCTGTGGCAG
CTCAGGAGCCTGAAGCTGGACTGGAAGAAGAAGGTGGGCGTGGCCGTCATGTTTTGCGTGGGGACCTTCGTCACC
GTCGTGAGCATCTTGCGTCTCCGCGCTCTCGACTTCAGCTCCCACTCAACCAACCCGACCTGGGACTTCTTCGAC
GTCGGCATCTGGTCCACCGTCGAGATCAACGTCGGCATCATATGCGTCTGTATGCCCTCCCTGCGACTGCTGCTC
GTCCGTCTCATCCCATCGCTATCGACGTCATCCCAACGCGGTTACCTCCCCGCCGGCTCTGCCCAGCACGCAAAC
TCTCCTCGTCGGAGGGAGATGGGCTCGAAAGTGGGCGATAATCAGATCTTGCATCAGACGACGTATGCCGTCGAG
TATGACGACAAGGAGAATGGTGAGGATATGCGTGTCGTTTATCTGCAAGACGTCGACGTGGGCAGCTTATCGGCG
ACGGCGGAAAACGTCATCTGA
Gene >Ophio5|1104
ATGCGGCCTCGTTGCCTGCTGTCTCTGGCCTTGGCCCTGACGGCGGGCGTCGCCGCTCAAGCCCAGGAATTGCCC
GCCTGCGCCGTGAGTCGGACCCTTCCTGACTCGTGAGAGCTTGCCTCATGCTGACGGCTTTCTGGTTGGCTTTAG
ATGACCTGTCTGGCCCCTGCCATCGCCCAGTCCAAGTGTCCTATCACGGATAAGAAATGTCTATGCACAGACGCC
GCGCTCGTCAAGAACATGACGGCCTGTGTCATGGCCAGTTGCAGCATCAAGGAGGCTCTTCGTAAGTCGTCGACG
ATCCCCTCCCTTTTCAGTACACGAGCAAAACTCTCGGCTCACAACCGCTGAAGAAGCCAAAAACGCAACGGCGAC
CAAATGCGGCGAGCCCGTTCGTGACAAGTCGCCGGGATACGTTGCCGTAGGGACGGCCTTTGGCATCCTCTCGAG
CCTCTGCGTCATCCAGCGCTTCGCCTACAAGTTCTGGACAAAACTCGACATCGGCCTCGACGACTGGACGACGCT
GGCGGCCATGGTCATTAGCCTTCCCACCATCGTCTTCGACGCCCACATCGTGGGACCCAACGGTATGGGTCGCGA
TACCTGGACGCTGTCGCCCGACAACATCAACAACTTTAGCCTCTACTTTTTCGTCATGGAGATTTTGTATTTTGC
CGATGTCGCCCTCATCAAGGCGGCGCTGCTCTTCTTCTATGTCCGCATCTTTCCGGCTCGTGAGGTGCGCAGGTT
GCTGTATGGCACCTTGGCTCTCGTCACCATCTTTGGTCTCGCCTTTATCTGCATCGCCATCTTTCAGTGCACCCC
GATCGACTATTACTGGCGGCGCTGGGACGGAGAGCACACGGGCCGCTGTCTCAACATGCTTGCCATTGCCTGGTC
TAACGCGGCCATTAGCATCGCCATCGATATCTGGATGCTGGCCGTTCCGCTGTGGCAGCTCAGGAGCCTGAAGCT
GGACTGGAAGAAGAAGGTGGGCGTGGCCGTCATGTTTTGCGTGGGGACCTTGTAAGTTGAAGTCGTCATCGTGCA
TGAAACAAAACGAGTCTTGACTGACTCTCGATAGCGTCACCGTCGTGAGCATCTTGCGTCTCCGCGCTCTCGACT
TCAGCTCCCACTCAACCAACCCGACCTGGGACTTCTTCGACGTCGGCATCTGGTCCACCGTCGAGATCAACGTCG
GCATCATATGCGTCTGTATGCCCTCCCTGCGACTGCTGCTCGTCCGTCTCATCCCATCGCTATCGACGTCATCCC
AACGCGGTTACCTCCCCGCCGGCTCTGCCCAGCACGCAAACTCTCCTCGTCGGAGGGAGATGGGCTCGAAAGTGG
GCGATAATCAGATCTTGCATCAGACGACGTATGCCGTCGAGTATGACGACAAGGAGAATGGTGAGGATATGCGTG
TCGTTTATCTGCAAGACGTCGACGTGGGCAGCTTATCGGCGACGGCGGAAAACGTCATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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